RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 ERBINQ96RT1 1412 aa12.42□□□□□ -0.42
MECP2-204ENST00000415944 RNF17Q9BXT8 1623 aaKnown RBP12.41□□□□□ -0.42
MECP2-204ENST00000415944 ITGAEP38570 1179 aa12.41□□□□□ -0.42
MECP2-204ENST00000415944 NAIPQ13075 1403 aa12.41□□□□□ -0.42
MECP2-204ENST00000415944 CHIC2Q9UKJ5 165 aa12.41□□□□□ -0.42
MECP2-204ENST00000415944 ADAMTSL3P82987 1691 aa12.41□□□□□ -0.42
MECP2-204ENST00000415944 DEPDC5O75140 1603 aa12.4□□□□□ -0.42
MECP2-204ENST00000415944 MROH1Q8NDA8 1641 aa12.39□□□□□ -0.43
MECP2-204ENST00000415944 RRP7BPQ9NSQ0 103 aa12.38□□□□□ -0.43
MECP2-204ENST00000415944 FER1L4A9Z1Z3 1794 aa12.38□□□□□ -0.43
MECP2-204ENST00000415944 ANKRD50Q9ULJ7 1429 aa12.37□□□□□ -0.43
MECP2-204ENST00000415944 FAM135AQ9P2D6 1515 aa12.37□□□□□ -0.43
MECP2-204ENST00000415944 PRDM15P57071 1507 aaPredicted RBP12.37□□□□□ -0.43
MECP2-204ENST00000415944 UNC13BO14795 1591 aa12.36□□□□□ -0.43
MECP2-204ENST00000415944 MADDQ8WXG6 1647 aa12.36□□□□□ -0.43
MECP2-204ENST00000415944 ZC3H13Q5T200 1668 aaKnown RBP12.35□□□□□ -0.43
MECP2-204ENST00000415944 ARID4BQ4LE39 1312 aaPredicted RBP12.35□□□□□ -0.43
MECP2-204ENST00000415944 VWDEQ8N2E2 1590 aa12.35□□□□□ -0.43
MECP2-204ENST00000415944 TONSLQ96HA7 1378 aa12.34□□□□□ -0.43
MECP2-204ENST00000415944 KDM5DQ9BY66 1539 aa12.34□□□□□ -0.43
MECP2-204ENST00000415944 MROH2AA6NES4 1674 aa12.34□□□□□ -0.43
MECP2-204ENST00000415944 KIF3BO15066 747 aa12.33□□□□□ -0.44
MECP2-204ENST00000415944 RIMS1Q86UR5 1692 aaKnown RBP12.32□□□□□ -0.44
MECP2-204ENST00000415944 CEP152O94986 1710 aa12.32□□□□□ -0.44
MECP2-204ENST00000415944 PPP1R15AO75807 674 aaPredicted RBP12.32□□□□□ -0.44
MECP2-204ENST00000415944 CLTCQ00610 1675 aaKnown RBP12.32□□□□□ -0.44
MECP2-204ENST00000415944 CNTLNQ9NXG0 1405 aa12.31□□□□□ -0.44
MECP2-204ENST00000415944 PPP6R1Q9UPN7 881 aa12.31□□□□□ -0.44
MECP2-204ENST00000415944 ABCC3O15438 1527 aa12.31□□□□□ -0.44
MECP2-204ENST00000415944 IQGAP3Q86VI3 1631 aa12.3□□□□□ -0.44
MECP2-204ENST00000415944 LMTK2Q8IWU2 1503 aa12.3□□□□□ -0.44
MECP2-204ENST00000415944 KDM4FA0A1W2PPD8 638 aa12.29□□□□□ -0.44
MECP2-204ENST00000415944 MLECQ14165 292 aa12.29□□□□□ -0.44
MECP2-204ENST00000415944 CAMSAP1Q5T5Y3 1602 aa12.29□□□□□ -0.44
MECP2-204ENST00000415944 GGT6Q6P531 493 aa12.28□□□□□ -0.44
MECP2-204ENST00000415944 TET3O43151 1660 aa12.28□□□□□ -0.44
MECP2-204ENST00000415944 C3P01024 1663 aa12.28□□□□□ -0.44
MECP2-204ENST00000415944 PTPRMP28827 1452 aa12.27□□□□□ -0.45
MECP2-204ENST00000415944 KANK1Q14678 1352 aa12.26□□□□□ -0.45
MECP2-204ENST00000415944 EFCAB6Q5THR3 1501 aa12.26□□□□□ -0.45
MECP2-204ENST00000415944 ARHGAP31Q2M1Z3 1444 aa12.24□□□□□ -0.45
MECP2-204ENST00000415944 SETD1BQ9UPS6 1966 aaKnown RBP12.23□□□□□ -0.45
MECP2-204ENST00000415944 PZPP20742 1482 aa12.23□□□□□ -0.45
MECP2-204ENST00000415944 WASHC2CQ9Y4E1 1318 aa12.23□□□□□ -0.45
MECP2-204ENST00000415944 E9PCH4 1651 aa12.22□□□□□ -0.45
MECP2-204ENST00000415944 NUP155O75694 1391 aa12.22□□□□□ -0.45
MECP2-204ENST00000415944 ZMYM3Q14202 1370 aa12.22□□□□□ -0.45
MECP2-204ENST00000415944 CFAP65Q6ZU64 1925 aaKnown RBP12.22□□□□□ -0.45
MECP2-204ENST00000415944 MPHOSPH9Q99550 1183 aa12.22□□□□□ -0.45
MECP2-204ENST00000415944 ESF1Q9H501 851 aaKnown RBP12.22□□□□□ -0.45
MECP2-204ENST00000415944 PREX1Q8TCU6 1659 aa12.22□□□□□ -0.45
MECP2-204ENST00000415944 NPATQ14207 1427 aa12.21□□□□□ -0.45
MECP2-204ENST00000415944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.45
MECP2-204ENST00000415944 SPATA31D1Q6ZQQ2 1576 aa12.21□□□□□ -0.46
MECP2-204ENST00000415944 RPRD2Q5VT52 1461 aaKnown RBP12.21□□□□□ -0.46
MECP2-204ENST00000415944 NEUROD1Q13562 356 aa12.2□□□□□ -0.46
MECP2-204ENST00000415944 TRIM52Q96A61 297 aa12.2□□□□□ -0.46
MECP2-204ENST00000415944 MIER1Q8N108 512 aa12.19□□□□□ -0.46
MECP2-204ENST00000415944 ERVK-7P63135 1459 aa12.19□□□□□ -0.46
MECP2-204ENST00000415944 SIN3AQ96ST3 1273 aa12.18□□□□□ -0.46
MECP2-204ENST00000415944 ANKRD30BQ9BXX2 1392 aa12.18□□□□□ -0.46
MECP2-204ENST00000415944 SPHKAPQ2M3C7 1700 aa12.17□□□□□ -0.46
MECP2-204ENST00000415944 CCER2I3L3R5 266 aa12.17□□□□□ -0.46
MECP2-204ENST00000415944 NOS1P29475 1434 aa12.17□□□□□ -0.46
MECP2-204ENST00000415944 ZNF142P52746 1687 aaPredicted RBP12.16□□□□□ -0.46
MECP2-204ENST00000415944 MYO3AQ8NEV4 1616 aa12.16□□□□□ -0.46
MECP2-204ENST00000415944 CEBPAP49715 358 aaPredicted RBP12.16□□□□□ -0.46
MECP2-204ENST00000415944 SYNMO15061 1565 aa12.16□□□□□ -0.46
MECP2-204ENST00000415944 SLC4A1APQ9BWU0 796 aaKnown RBP12.15□□□□□ -0.46
MECP2-204ENST00000415944 PIK3C2BO00750 1634 aa12.14□□□□□ -0.47
MECP2-204ENST00000415944 PTPRTO14522 1441 aa12.13□□□□□ -0.47
MECP2-204ENST00000415944 TRPM2O94759 1503 aa12.13□□□□□ -0.47
MECP2-204ENST00000415944 EIF4G2P78344 907 aaKnown RBP eCLIP12.13□□□□□ -0.47
MECP2-204ENST00000415944 PELP1Q8IZL8 1130 aaKnown RBP12.13□□□□□ -0.47
MECP2-204ENST00000415944 TNRQ92752 1358 aa12.13□□□□□ -0.47
MECP2-204ENST00000415944 FBXO31Q5XUX0 539 aaPredicted RBP12.12□□□□□ -0.47
MECP2-204ENST00000415944 NLRP1Q9C000 1473 aa12.12□□□□□ -0.47
MECP2-204ENST00000415944 KDM5AP29375 1690 aaKnown RBP12.12□□□□□ -0.47
MECP2-204ENST00000415944 CEP170BQ9Y4F5 1589 aaPredicted RBP12.11□□□□□ -0.47
MECP2-204ENST00000415944 PLA2R1Q13018 1463 aa12.11□□□□□ -0.47
MECP2-204ENST00000415944 ANP32CO43423 234 aa12.11□□□□□ -0.47
MECP2-204ENST00000415944 PKD2Q13563 968 aa12.11□□□□□ -0.47
MECP2-204ENST00000415944 STAC3Q96MF2 364 aa12.1□□□□□ -0.47
MECP2-204ENST00000415944 UHRF1BP1Q6BDS2 1440 aa12.1□□□□□ -0.47
MECP2-204ENST00000415944 A2ML1A8K2U0 1454 aa12.09□□□□□ -0.47
MECP2-204ENST00000415944 LMTK3Q96Q04 1460 aa12.09□□□□□ -0.47
MECP2-204ENST00000415944 UBR1Q8IWV7 1749 aa12.09□□□□□ -0.47
MECP2-204ENST00000415944 CLTCL1P53675 1640 aa12.09□□□□□ -0.47
MECP2-204ENST00000415944 PLPPR3Q6T4P5 718 aa12.09□□□□□ -0.47
MECP2-204ENST00000415944 MYO5BQ9ULV0 1848 aa12.08□□□□□ -0.48
MECP2-204ENST00000415944 UGGT1Q9NYU2 1555 aa12.08□□□□□ -0.48
MECP2-204ENST00000415944 ADGRB3O60242 1522 aa12.07□□□□□ -0.48
MECP2-204ENST00000415944 TMEM131LA2VDJ0 1609 aa12.07□□□□□ -0.48
MECP2-204ENST00000415944 KIF1BO60333 1816 aa12.07□□□□□ -0.48
MECP2-204ENST00000415944 SLC52A1Q9NWF4 448 aa12.06□□□□□ -0.48
MECP2-204ENST00000415944 FOXD1Q16676 465 aa12.05□□□□□ -0.48
MECP2-204ENST00000415944 SCAF1Q9H7N4 1312 aaKnown RBP12.05□□□□□ -0.48
MECP2-204ENST00000415944 NEURL4Q96JN8 1562 aa12.05□□□□□ -0.48
MECP2-204ENST00000415944 IDI1Q13907 227 aa12.04□□□□□ -0.48
MECP2-204ENST00000415944 AEBP2Q6ZN18 517 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms