RNA–Protein interactions for RNA: ENST00000415548.1

CCT3-208, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-208ENST00000415548 HSPA2P54652 639 aa12.98□□□□□ -0.33
CCT3-208ENST00000415548 ZMYM3Q14202 1370 aa12.97□□□□□ -0.33
CCT3-208ENST00000415548 PREX1Q8TCU6 1659 aa12.97□□□□□ -0.33
CCT3-208ENST00000415548 FAM50AQ14320 339 aaKnown RBP12.97□□□□□ -0.33
CCT3-208ENST00000415548 SETD1BQ9UPS6 1966 aaKnown RBP12.96□□□□□ -0.33
CCT3-208ENST00000415548 CHIC2Q9UKJ5 165 aa12.95□□□□□ -0.34
CCT3-208ENST00000415548 KIF15Q9NS87 1388 aa12.94□□□□□ -0.34
CCT3-208ENST00000415548 DUOX2Q9NRD8 1548 aa12.94□□□□□ -0.34
CCT3-208ENST00000415548 RRP7BPQ9NSQ0 103 aa12.94□□□□□ -0.34
CCT3-208ENST00000415548 UHRF1BP1Q6BDS2 1440 aa12.94□□□□□ -0.34
CCT3-208ENST00000415548 RNF17Q9BXT8 1623 aaKnown RBP12.93□□□□□ -0.34
CCT3-208ENST00000415548 EIF2AK4Q9P2K8 1649 aaKnown RBP12.93□□□□□ -0.34
CCT3-208ENST00000415548 KDM5DQ9BY66 1539 aa12.93□□□□□ -0.34
CCT3-208ENST00000415548 WASHC2CQ9Y4E1 1318 aa12.92□□□□□ -0.34
CCT3-208ENST00000415548 NPATQ14207 1427 aa12.92□□□□□ -0.34
CCT3-208ENST00000415548 PTPRKQ15262 1439 aa12.92□□□□□ -0.34
CCT3-208ENST00000415548 ANKRD30AQ9BXX3 1397 aa12.92□□□□□ -0.34
CCT3-208ENST00000415548 FAM135AQ9P2D6 1515 aa12.91□□□□□ -0.34
CCT3-208ENST00000415548 MROH1Q8NDA8 1641 aa12.9□□□□□ -0.34
CCT3-208ENST00000415548 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
CCT3-208ENST00000415548 ERBINQ96RT1 1412 aa12.89□□□□□ -0.35
CCT3-208ENST00000415548 ADGRL2O95490 1459 aa12.89□□□□□ -0.35
CCT3-208ENST00000415548 ABCC3O15438 1527 aa12.88□□□□□ -0.35
CCT3-208ENST00000415548 FBXO31Q5XUX0 539 aaPredicted RBP12.88□□□□□ -0.35
CCT3-208ENST00000415548 PZPP20742 1482 aa12.87□□□□□ -0.35
CCT3-208ENST00000415548 MYO3AQ8NEV4 1616 aa12.87□□□□□ -0.35
CCT3-208ENST00000415548 ZC3H13Q5T200 1668 aaKnown RBP12.86□□□□□ -0.35
CCT3-208ENST00000415548 CEP152O94986 1710 aa12.86□□□□□ -0.35
CCT3-208ENST00000415548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.351e-10■■□□□ 12.5
CCT3-208ENST00000415548 DEPDC5O75140 1603 aa12.85□□□□□ -0.35
CCT3-208ENST00000415548 TNRQ92752 1358 aa12.85□□□□□ -0.35
CCT3-208ENST00000415548 STRCQ7RTU9 1775 aa12.85□□□□□ -0.35
CCT3-208ENST00000415548 PRDM15P57071 1507 aaPredicted RBP12.85□□□□□ -0.35
CCT3-208ENST00000415548 ITGAEP38570 1179 aa12.85□□□□□ -0.35
CCT3-208ENST00000415548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCT3-208ENST00000415548 ZNF142P52746 1687 aaPredicted RBP12.84□□□□□ -0.35
CCT3-208ENST00000415548 CEP170BQ9Y4F5 1589 aaPredicted RBP12.84□□□□□ -0.35
CCT3-208ENST00000415548 CAMSAP1Q5T5Y3 1602 aa12.84□□□□□ -0.35
CCT3-208ENST00000415548 ANKRD50Q9ULJ7 1429 aa12.83□□□□□ -0.36
CCT3-208ENST00000415548 RRBP1Q9P2E9 1410 aaKnown RBP12.82□□□□□ -0.36
CCT3-208ENST00000415548 ROCK1Q13464 1354 aa12.81□□□□□ -0.36
CCT3-208ENST00000415548 KANK1Q14678 1352 aa12.81□□□□□ -0.36
CCT3-208ENST00000415548 A2ML1A8K2U0 1454 aa12.81□□□□□ -0.36
CCT3-208ENST00000415548 CFAP65Q6ZU64 1925 aaKnown RBP12.81□□□□□ -0.36
CCT3-208ENST00000415548 ERVK-7P63135 1459 aa12.8□□□□□ -0.36
CCT3-208ENST00000415548 SPATA31D1Q6ZQQ2 1576 aa12.79□□□□□ -0.36
CCT3-208ENST00000415548 VWDEQ8N2E2 1590 aa12.79□□□□□ -0.36
CCT3-208ENST00000415548 DMRT2Q9Y5R5 561 aa12.79□□□□□ -0.36
CCT3-208ENST00000415548 ARHGAP31Q2M1Z3 1444 aa12.79□□□□□ -0.36
CCT3-208ENST00000415548 LMTK2Q8IWU2 1503 aa12.78□□□□□ -0.36
CCT3-208ENST00000415548 NCKAP5LQ9HCH0 1330 aa12.78□□□□□ -0.36
CCT3-208ENST00000415548 NLRP1Q9C000 1473 aa12.78□□□□□ -0.36
CCT3-208ENST00000415548 PTPRTO14522 1441 aa12.77□□□□□ -0.37
CCT3-208ENST00000415548 PLA2R1Q13018 1463 aa12.77□□□□□ -0.37
CCT3-208ENST00000415548 UNC13BO14795 1591 aa12.75□□□□□ -0.37
CCT3-208ENST00000415548 EFCAB6Q5THR3 1501 aa12.75□□□□□ -0.37
CCT3-208ENST00000415548 UGGT1Q9NYU2 1555 aa12.74□□□□□ -0.37
CCT3-208ENST00000415548 PKD2Q13563 968 aa12.74□□□□□ -0.37
CCT3-208ENST00000415548 THEMISQ8N1K5 641 aaPredicted RBP12.73□□□□□ -0.37
CCT3-208ENST00000415548 ILDR1Q86SU0 546 aaPredicted RBP12.72□□□□□ -0.37
CCT3-208ENST00000415548 TET3O43151 1660 aa12.72□□□□□ -0.37
CCT3-208ENST00000415548 POLR1AO95602 1720 aaPredicted RBP12.71□□□□□ -0.38
CCT3-208ENST00000415548 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.38
CCT3-208ENST00000415548 NOS1P29475 1434 aa12.71□□□□□ -0.38
CCT3-208ENST00000415548 IQGAP3Q86VI3 1631 aa12.7□□□□□ -0.38
CCT3-208ENST00000415548 SYNMO15061 1565 aa12.7□□□□□ -0.38
CCT3-208ENST00000415548 NEURL4Q96JN8 1562 aa12.7□□□□□ -0.38
CCT3-208ENST00000415548 GCC2Q8IWJ2 1684 aa12.7□□□□□ -0.38
CCT3-208ENST00000415548 NAIPQ13075 1403 aa12.7□□□□□ -0.38
CCT3-208ENST00000415548 PIK3C2BO00750 1634 aa12.7□□□□□ -0.38
CCT3-208ENST00000415548 NUP155O75694 1391 aa12.69□□□□□ -0.38
CCT3-208ENST00000415548 ANKLE2Q86XL3 938 aa12.69□□□□□ -0.38
CCT3-208ENST00000415548 CERKQ8TCT0 537 aa12.69□□□□□ -0.38
CCT3-208ENST00000415548 RPRD2Q5VT52 1461 aaKnown RBP12.69□□□□□ -0.38
CCT3-208ENST00000415548 IDI1Q13907 227 aa12.68□□□□□ -0.38
CCT3-208ENST00000415548 E9PCH4 1651 aa12.67□□□□□ -0.38
CCT3-208ENST00000415548 LTBP4Q8N2S1 1624 aa12.66□□□□□ -0.38
CCT3-208ENST00000415548 ZNF335Q9H4Z2 1342 aaPredicted RBP12.66□□□□□ -0.38
CCT3-208ENST00000415548 HFM1A2PYH4 1435 aa12.66□□□□□ -0.38
CCT3-208ENST00000415548 NPHP4O75161 1426 aaPredicted RBP12.66□□□□□ -0.38
CCT3-208ENST00000415548 FBXO41Q8TF61 875 aa12.66□□□□□ -0.38
CCT3-208ENST00000415548 STAG3Q9UJ98 1225 aa12.66□□□□□ -0.38
CCT3-208ENST00000415548 SLC52A1Q9NWF4 448 aa12.65□□□□□ -0.38
CCT3-208ENST00000415548 SLIT1O75093 1534 aa12.65□□□□□ -0.38
CCT3-208ENST00000415548 MED14O60244 1454 aa12.65□□□□□ -0.38
CCT3-208ENST00000415548 ARHGAP23Q9P227 1491 aa12.65□□□□□ -0.38
CCT3-208ENST00000415548 KDM5AP29375 1690 aaKnown RBP12.64□□□□□ -0.39
CCT3-208ENST00000415548 ADGRB3O60242 1522 aa12.63□□□□□ -0.39
CCT3-208ENST00000415548 LTKP29376 864 aa12.63□□□□□ -0.39
CCT3-208ENST00000415548 TXNDC2Q86VQ3 553 aa12.63□□□□□ -0.39
CCT3-208ENST00000415548 TMEM2Q9UHN6 1383 aa12.63□□□□□ -0.39
CCT3-208ENST00000415548 SCAF11Q99590 1463 aaKnown RBP12.63□□□□□ -0.39
CCT3-208ENST00000415548 IQGAP1P46940 1657 aa12.63□□□□□ -0.39
CCT3-208ENST00000415548 TRIM52Q96A61 297 aa12.61□□□□□ -0.39
CCT3-208ENST00000415548 EID1Q9Y6B2 187 aa12.61□□□□□ -0.39
CCT3-208ENST00000415548 MYO5BQ9ULV0 1848 aa12.6□□□□□ -0.39
CCT3-208ENST00000415548 TMEM131LA2VDJ0 1609 aa12.59□□□□□ -0.39
CCT3-208ENST00000415548 CHGAP10645 457 aaKnown RBP12.59□□□□□ -0.39
CCT3-208ENST00000415548 SPHKAPQ2M3C7 1700 aa12.58□□□□□ -0.4
CCT3-208ENST00000415548 IQSEC2Q5JU85 1478 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms