RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 ZMYM3Q14202 1370 aa38.65■■■■□ 3.78
CPNE1-207ENST00000414664 C3P01024 1663 aa38.65■■■■□ 3.78
CPNE1-207ENST00000414664 ERBINQ96RT1 1412 aa38.64■■■■□ 3.78
CPNE1-207ENST00000414664 CLTCQ00610 1675 aaKnown RBP38.64■■■■□ 3.78
CPNE1-207ENST00000414664 FAM135AQ9P2D6 1515 aa38.63■■■■□ 3.77
CPNE1-207ENST00000414664 RRBP1Q9P2E9 1410 aaKnown RBP38.62■■■■□ 3.77
CPNE1-207ENST00000414664 WASHC2CQ9Y4E1 1318 aa38.6■■■■□ 3.77
CPNE1-207ENST00000414664 RNF17Q9BXT8 1623 aaKnown RBP38.59■■■■□ 3.77
CPNE1-207ENST00000414664 KDM5DQ9BY66 1539 aa38.56■■■■□ 3.76
CPNE1-207ENST00000414664 PTPRKQ15262 1439 aa38.55■■■■□ 3.76
CPNE1-207ENST00000414664 ITGAEP38570 1179 aa38.55■■■■□ 3.76
CPNE1-207ENST00000414664 SETD1BQ9UPS6 1966 aaKnown RBP38.55■■■■□ 3.76
CPNE1-207ENST00000414664 ROCK1Q13464 1354 aa38.52■■■■□ 3.76
CPNE1-207ENST00000414664 LMTK3Q96Q04 1460 aa38.51■■■■□ 3.76
CPNE1-207ENST00000414664 NPATQ14207 1427 aa38.5■■■■□ 3.75
CPNE1-207ENST00000414664 PREX1Q8TCU6 1659 aa38.49■■■■□ 3.75
CPNE1-207ENST00000414664 UHRF1BP1Q6BDS2 1440 aa38.46■■■■□ 3.75
CPNE1-207ENST00000414664 ANKRD50Q9ULJ7 1429 aa38.46■■■■□ 3.75
CPNE1-207ENST00000414664 MROH1Q8NDA8 1641 aa38.45■■■■□ 3.75
CPNE1-207ENST00000414664 ZC3H13Q5T200 1668 aaKnown RBP38.44■■■■□ 3.74
CPNE1-207ENST00000414664 KANK1Q14678 1352 aa38.42■■■■□ 3.74
CPNE1-207ENST00000414664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.41■■■■□ 3.749e-9■□□□□ 10.7
CPNE1-207ENST00000414664 ABCC3O15438 1527 aa38.41■■■■□ 3.74
CPNE1-207ENST00000414664 PRDM15P57071 1507 aaPredicted RBP38.41■■■■□ 3.74
CPNE1-207ENST00000414664 DEPDC5O75140 1603 aa38.4■■■■□ 3.74
CPNE1-207ENST00000414664 PZPP20742 1482 aa38.38■■■■□ 3.73
CPNE1-207ENST00000414664 HSPA2P54652 639 aa38.34■■■■□ 3.73
CPNE1-207ENST00000414664 CEP152O94986 1710 aa38.32■■■■□ 3.72
CPNE1-207ENST00000414664 FBXO31Q5XUX0 539 aaPredicted RBP38.3■■■■□ 3.72
CPNE1-207ENST00000414664 CAMSAP1Q5T5Y3 1602 aa38.27■■■■□ 3.72
CPNE1-207ENST00000414664 TNRQ92752 1358 aa38.27■■■■□ 3.72
CPNE1-207ENST00000414664 VWDEQ8N2E2 1590 aa38.24■■■■□ 3.71
CPNE1-207ENST00000414664 ARHGAP31Q2M1Z3 1444 aa38.24■■■■□ 3.71
CPNE1-207ENST00000414664 MYO3AQ8NEV4 1616 aa38.23■■■■□ 3.71
CPNE1-207ENST00000414664 LMTK2Q8IWU2 1503 aa38.22■■■■□ 3.71
CPNE1-207ENST00000414664 UNC13BO14795 1591 aa38.17■■■■□ 3.7
CPNE1-207ENST00000414664 SPATA31D1Q6ZQQ2 1576 aa38.16■■■■□ 3.7
CPNE1-207ENST00000414664 ZNF142P52746 1687 aaPredicted RBP38.16■■■■□ 3.7
CPNE1-207ENST00000414664 ERVK-7P63135 1459 aa38.15■■■■□ 3.7
CPNE1-207ENST00000414664 CEP170BQ9Y4F5 1589 aaPredicted RBP38.15■■■■□ 3.7
CPNE1-207ENST00000414664 A2ML1A8K2U0 1454 aa38.14■■■■□ 3.7
CPNE1-207ENST00000414664 NAIPQ13075 1403 aa38.12■■■■□ 3.69
CPNE1-207ENST00000414664 NLRP1Q9C000 1473 aa38.12■■■■□ 3.69
CPNE1-207ENST00000414664 CFAP65Q6ZU64 1925 aaKnown RBP38.11■■■■□ 3.69
CPNE1-207ENST00000414664 HFM1A2PYH4 1435 aa38.1■■■■□ 3.69
CPNE1-207ENST00000414664 EFCAB6Q5THR3 1501 aa38.08■■■■□ 3.69
CPNE1-207ENST00000414664 GCC2Q8IWJ2 1684 aa38.08■■■■□ 3.69
CPNE1-207ENST00000414664 NUP155O75694 1391 aa38.07■■■■□ 3.69
CPNE1-207ENST00000414664 DMRT2Q9Y5R5 561 aa38.05■■■■□ 3.68
CPNE1-207ENST00000414664 TET3O43151 1660 aa38.04■■■■□ 3.68
CPNE1-207ENST00000414664 RPRD2Q5VT52 1461 aaKnown RBP38.03■■■■□ 3.68
CPNE1-207ENST00000414664 IQGAP3Q86VI3 1631 aa38.02■■■■□ 3.68
CPNE1-207ENST00000414664 THEMISQ8N1K5 641 aaPredicted RBP38■■■■□ 3.67
CPNE1-207ENST00000414664 STRCQ7RTU9 1775 aa38■■■■□ 3.67
CPNE1-207ENST00000414664 PLA2R1Q13018 1463 aa37.99■■■■□ 3.67
CPNE1-207ENST00000414664 UGGT1Q9NYU2 1555 aa37.97■■■■□ 3.67
CPNE1-207ENST00000414664 NOS1P29475 1434 aa37.95■■■■□ 3.67
CPNE1-207ENST00000414664 PKD2Q13563 968 aa37.94■■■■□ 3.66
CPNE1-207ENST00000414664 NCKAP5LQ9HCH0 1330 aa37.89■■■■□ 3.66
CPNE1-207ENST00000414664 TRIM52Q96A61 297 aa37.89■■■■□ 3.66
CPNE1-207ENST00000414664 SLC52A1Q9NWF4 448 aa37.89■■■■□ 3.66
CPNE1-207ENST00000414664 PTPRTO14522 1441 aa37.88■■■■□ 3.66
CPNE1-207ENST00000414664 E9PCH4 1651 aa37.87■■■■□ 3.65
CPNE1-207ENST00000414664 SYNMO15061 1565 aa37.85■■■■□ 3.65
CPNE1-207ENST00000414664 IDI1Q13907 227 aa37.85■■■■□ 3.65
CPNE1-207ENST00000414664 STAG3Q9UJ98 1225 aa37.85■■■■□ 3.65
CPNE1-207ENST00000414664 ANKLE2Q86XL3 938 aa37.84■■■■□ 3.65
CPNE1-207ENST00000414664 UBR1Q8IWV7 1749 aa37.82■■■■□ 3.65
CPNE1-207ENST00000414664 ACIN1Q9UKV3 1341 aaKnown RBP37.82■■■■□ 3.64
CPNE1-207ENST00000414664 PIK3C2BO00750 1634 aa37.8■■■■□ 3.64
CPNE1-207ENST00000414664 SETD5Q9C0A6 1442 aa37.78■■■■□ 3.64
CPNE1-207ENST00000414664 KDM5AP29375 1690 aaKnown RBP37.76■■■■□ 3.63
CPNE1-207ENST00000414664 POLR1AO95602 1720 aaPredicted RBP37.75■■■■□ 3.63
CPNE1-207ENST00000414664 SLC4A1APQ9BWU0 796 aaKnown RBP37.72■■■■□ 3.63
CPNE1-207ENST00000414664 SLIT1O75093 1534 aa37.69■■■■□ 3.62
CPNE1-207ENST00000414664 ADGRB3O60242 1522 aa37.68■■■■□ 3.62
CPNE1-207ENST00000414664 EID1Q9Y6B2 187 aa37.68■■■■□ 3.62
CPNE1-207ENST00000414664 ARHGAP23Q9P227 1491 aa37.67■■■■□ 3.62
CPNE1-207ENST00000414664 TMEM2Q9UHN6 1383 aa37.67■■■■□ 3.62
CPNE1-207ENST00000414664 NEURL4Q96JN8 1562 aa37.66■■■■□ 3.62
CPNE1-207ENST00000414664 MED14O60244 1454 aa37.65■■■■□ 3.62
CPNE1-207ENST00000414664 TXNDC2Q86VQ3 553 aa37.65■■■■□ 3.62
CPNE1-207ENST00000414664 SPHKAPQ2M3C7 1700 aa37.64■■■■□ 3.62
CPNE1-207ENST00000414664 NPHP4O75161 1426 aaPredicted RBP37.63■■■■□ 3.61
CPNE1-207ENST00000414664 CHGAP10645 457 aaKnown RBP37.62■■■■□ 3.61
CPNE1-207ENST00000414664 SCAF11Q99590 1463 aaKnown RBP37.62■■■■□ 3.61
CPNE1-207ENST00000414664 RAB3GAP2Q9H2M9 1393 aa37.61■■■■□ 3.61
CPNE1-207ENST00000414664 LTKP29376 864 aa37.59■■■■□ 3.61
CPNE1-207ENST00000414664 HDGFP51858 240 aaKnown RBP37.58■■■■□ 3.61
CPNE1-207ENST00000414664 MPHOSPH9Q99550 1183 aa37.58■■■■□ 3.61
CPNE1-207ENST00000414664 TMEM131LA2VDJ0 1609 aa37.58■■■■□ 3.61
CPNE1-207ENST00000414664 IQGAP1P46940 1657 aa37.55■■■■□ 3.6
CPNE1-207ENST00000414664 TRPM2O94759 1503 aa37.54■■■■□ 3.6
CPNE1-207ENST00000414664 HRCP23327 699 aa37.53■■■■□ 3.6
CPNE1-207ENST00000414664 CERKQ8TCT0 537 aa37.51■■■■□ 3.6
CPNE1-207ENST00000414664 MYO5BQ9ULV0 1848 aa37.51■■■■□ 3.6
CPNE1-207ENST00000414664 ZNF335Q9H4Z2 1342 aaPredicted RBP37.49■■■■□ 3.59
CPNE1-207ENST00000414664 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.47■■■■□ 3.59
CPNE1-207ENST00000414664 RIMS2Q9UQ26 1411 aa37.46■■■■□ 3.59
CPNE1-207ENST00000414664 FOXD1Q16676 465 aa37.45■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms