RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TRIM26Q12899 539 aaPredicted RBP46.03■■■■■ 4.96
CSNK1E-206ENST00000413574 FER1L4A9Z1Z3 1794 aa46.03■■■■■ 4.96
CSNK1E-206ENST00000413574 MROH1Q8NDA8 1641 aa46.01■■■■■ 4.96
CSNK1E-206ENST00000413574 DEPDC5O75140 1603 aa45.97■■■■■ 4.95
CSNK1E-206ENST00000413574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP45.95■■■■■ 4.951e-6■■■□□ 14.6
CSNK1E-206ENST00000413574 RIMS1Q86UR5 1692 aaKnown RBP45.95■■■■■ 4.95
CSNK1E-206ENST00000413574 CLTCQ00610 1675 aaKnown RBP45.91■■■■■ 4.94
CSNK1E-206ENST00000413574 PRDM15P57071 1507 aaPredicted RBP45.9■■■■■ 4.94
CSNK1E-206ENST00000413574 ESF1Q9H501 851 aaKnown RBP45.87■■■■■ 4.93
CSNK1E-206ENST00000413574 UNC13BO14795 1591 aa45.86■■■■■ 4.93
CSNK1E-206ENST00000413574 CEP152O94986 1710 aa45.84■■■■■ 4.93
CSNK1E-206ENST00000413574 SETD5Q9C0A6 1442 aa45.84■■■■■ 4.93
CSNK1E-206ENST00000413574 PPP6R1Q9UPN7 881 aa45.84■■■■■ 4.93
CSNK1E-206ENST00000413574 WASHC2CQ9Y4E1 1318 aa45.84■■■■■ 4.93
CSNK1E-206ENST00000413574 KDM5DQ9BY66 1539 aa45.83■■■■■ 4.93
CSNK1E-206ENST00000413574 ABCC3O15438 1527 aa45.79■■■■■ 4.92
CSNK1E-206ENST00000413574 VWDEQ8N2E2 1590 aa45.77■■■■■ 4.92
CSNK1E-206ENST00000413574 PTPRMP28827 1452 aa45.77■■■■■ 4.92
CSNK1E-206ENST00000413574 PLPPR3Q6T4P5 718 aa45.77■■■■■ 4.92
CSNK1E-206ENST00000413574 CNTLNQ9NXG0 1405 aa45.77■■■■■ 4.92
CSNK1E-206ENST00000413574 KANK1Q14678 1352 aa45.76■■■■■ 4.92
CSNK1E-206ENST00000413574 ZC3H13Q5T200 1668 aaKnown RBP45.76■■■■■ 4.92
CSNK1E-206ENST00000413574 MROH2AA6NES4 1674 aa45.74■■■■■ 4.91
CSNK1E-206ENST00000413574 RAB3GAP2Q9H2M9 1393 aa45.74■■■■■ 4.91
CSNK1E-206ENST00000413574 FAM135AQ9P2D6 1515 aa45.74■■■■■ 4.91
CSNK1E-206ENST00000413574 CEBPAP49715 358 aaPredicted RBP45.72■■■■■ 4.91
CSNK1E-206ENST00000413574 NUP155O75694 1391 aa45.72■■■■■ 4.91
CSNK1E-206ENST00000413574 C3P01024 1663 aa45.72■■■■■ 4.91
CSNK1E-206ENST00000413574 ZMYM3Q14202 1370 aa45.7■■■■■ 4.91
CSNK1E-206ENST00000413574 CAMSAP1Q5T5Y3 1602 aa45.68■■■■■ 4.9
CSNK1E-206ENST00000413574 IQGAP3Q86VI3 1631 aa45.67■■■■■ 4.9
CSNK1E-206ENST00000413574 TRIM52Q96A61 297 aa45.67■■■■■ 4.9
CSNK1E-206ENST00000413574 LMTK2Q8IWU2 1503 aa45.63■■■■■ 4.9
CSNK1E-206ENST00000413574 PCGF6Q9BYE7 350 aa45.59■■■■■ 4.89
CSNK1E-206ENST00000413574 CFAP65Q6ZU64 1925 aaKnown RBP45.59■■■■■ 4.89
CSNK1E-206ENST00000413574 TET3O43151 1660 aa45.57■■■■■ 4.89
CSNK1E-206ENST00000413574 EFCAB6Q5THR3 1501 aa45.54■■■■■ 4.88
CSNK1E-206ENST00000413574 PZPP20742 1482 aa45.52■■■■■ 4.88
CSNK1E-206ENST00000413574 FBXO31Q5XUX0 539 aaPredicted RBP45.52■■■■■ 4.88
CSNK1E-206ENST00000413574 NPATQ14207 1427 aa45.5■■■■■ 4.87
CSNK1E-206ENST00000413574 E9PCH4 1651 aa45.47■■■■■ 4.87
CSNK1E-206ENST00000413574 ARHGAP31Q2M1Z3 1444 aa45.47■■■■■ 4.87
CSNK1E-206ENST00000413574 HRCP23327 699 aa45.46■■■■■ 4.87
CSNK1E-206ENST00000413574 SLC4A1APQ9BWU0 796 aaKnown RBP45.43■■■■■ 4.86
CSNK1E-206ENST00000413574 PREX1Q8TCU6 1659 aa45.42■■■■■ 4.86
CSNK1E-206ENST00000413574 ACIN1Q9UKV3 1341 aaKnown RBP45.38■■■■■ 4.86
CSNK1E-206ENST00000413574 AEBP2Q6ZN18 517 aaPredicted RBP45.37■■■■■ 4.85
CSNK1E-206ENST00000413574 MPHOSPH9Q99550 1183 aa45.37■■■■■ 4.85
CSNK1E-206ENST00000413574 ERVK-7P63135 1459 aa45.37■■■■■ 4.85
CSNK1E-206ENST00000413574 RPRD2Q5VT52 1461 aaKnown RBP45.35■■■■■ 4.85
CSNK1E-206ENST00000413574 SPATA31D1Q6ZQQ2 1576 aa45.34■■■■■ 4.85
CSNK1E-206ENST00000413574 PKD2Q13563 968 aa45.34■■■■■ 4.85
CSNK1E-206ENST00000413574 SETD1BQ9UPS6 1966 aaKnown RBP45.32■■■■■ 4.85
CSNK1E-206ENST00000413574 TNRQ92752 1358 aa45.29■■■■■ 4.84
CSNK1E-206ENST00000413574 FOXD1Q16676 465 aa45.29■■■■■ 4.84
CSNK1E-206ENST00000413574 NOS1P29475 1434 aa45.25■■■■■ 4.83
CSNK1E-206ENST00000413574 SYNMO15061 1565 aa45.25■■■■■ 4.83
CSNK1E-206ENST00000413574 MYO3AQ8NEV4 1616 aa45.23■■■■■ 4.83
CSNK1E-206ENST00000413574 SPHKAPQ2M3C7 1700 aa45.22■■■■■ 4.83
CSNK1E-206ENST00000413574 UHRF1BP1Q6BDS2 1440 aa45.15■■■■■ 4.82
CSNK1E-206ENST00000413574 UGGT1Q9NYU2 1555 aa45.13■■■■■ 4.82
CSNK1E-206ENST00000413574 PTPRTO14522 1441 aa45.13■■■■■ 4.82
CSNK1E-206ENST00000413574 PLA2R1Q13018 1463 aa45.12■■■■■ 4.81
CSNK1E-206ENST00000413574 LMTK3Q96Q04 1460 aa45.1■■■■■ 4.81
CSNK1E-206ENST00000413574 CEP170BQ9Y4F5 1589 aaPredicted RBP45.08■■■■■ 4.81
CSNK1E-206ENST00000413574 NLRP1Q9C000 1473 aa45.08■■■■■ 4.81
CSNK1E-206ENST00000413574 IDI1Q13907 227 aa45.07■■■■■ 4.81
CSNK1E-206ENST00000413574 ZNF142P52746 1687 aaPredicted RBP45.07■■■■■ 4.81
CSNK1E-206ENST00000413574 TRPM2O94759 1503 aa45.06■■■■■ 4.8
CSNK1E-206ENST00000413574 PIK3C2BO00750 1634 aa45.06■■■■■ 4.8
CSNK1E-206ENST00000413574 A2ML1A8K2U0 1454 aa45.03■■■■■ 4.8
CSNK1E-206ENST00000413574 SLC52A1Q9NWF4 448 aa45.01■■■■■ 4.8
CSNK1E-206ENST00000413574 CLTCL1P53675 1640 aa45.01■■■■■ 4.8
CSNK1E-206ENST00000413574 DHX57Q6P158 1386 aaKnown RBP44.99■■■■■ 4.79
CSNK1E-206ENST00000413574 HSPA2P54652 639 aa44.97■■■■■ 4.79
CSNK1E-206ENST00000413574 UBR1Q8IWV7 1749 aa44.97■■■■■ 4.79
CSNK1E-206ENST00000413574 MYO5BQ9ULV0 1848 aa44.93■■■■■ 4.78
CSNK1E-206ENST00000413574 ANKRD30BQ9BXX2 1392 aa44.92■■■■■ 4.78
CSNK1E-206ENST00000413574 STAG3Q9UJ98 1225 aa44.89■■■■■ 4.78
CSNK1E-206ENST00000413574 ADGRB3O60242 1522 aa44.88■■■■■ 4.78
CSNK1E-206ENST00000413574 CHGAP10645 457 aaKnown RBP44.88■■■■■ 4.78
CSNK1E-206ENST00000413574 TMEM131LA2VDJ0 1609 aa44.87■■■■■ 4.77
CSNK1E-206ENST00000413574 CCDC144AA2RUR9 1427 aa44.87■■■■■ 4.77
CSNK1E-206ENST00000413574 KIF1BO60333 1816 aa44.85■■■■■ 4.77
CSNK1E-206ENST00000413574 KDM5AP29375 1690 aaKnown RBP44.85■■■■■ 4.77
CSNK1E-206ENST00000413574 THEMISQ8N1K5 641 aaPredicted RBP44.82■■■■■ 4.77
CSNK1E-206ENST00000413574 TMEM2Q9UHN6 1383 aa44.69■■■■■ 4.74
CSNK1E-206ENST00000413574 STRCQ7RTU9 1775 aa44.68■■■■■ 4.74
CSNK1E-206ENST00000413574 SLIT1O75093 1534 aa44.67■■■■■ 4.74
CSNK1E-206ENST00000413574 ZNF326Q5BKZ1 582 aaKnown RBP44.66■■■■■ 4.74
CSNK1E-206ENST00000413574 ARHGAP23Q9P227 1491 aa44.65■■■■■ 4.74
CSNK1E-206ENST00000413574 SIN3AQ96ST3 1273 aa44.64■■■■■ 4.74
CSNK1E-206ENST00000413574 NCKAP5LQ9HCH0 1330 aa44.64■■■■■ 4.74
CSNK1E-206ENST00000413574 SPATA31E1Q6ZUB1 1445 aa44.64■■■■■ 4.74
CSNK1E-206ENST00000413574 RGL3Q3MIN7 710 aa44.63■■■■■ 4.73
CSNK1E-206ENST00000413574 POLR1AO95602 1720 aaPredicted RBP44.61■■■■■ 4.73
CSNK1E-206ENST00000413574 LTKP29376 864 aa44.6■■■■■ 4.73
CSNK1E-206ENST00000413574 RIMS2Q9UQ26 1411 aa44.59■■■■■ 4.73
CSNK1E-206ENST00000413574 NUTM2DQ5VT03 806 aaPredicted RBP44.59■■■■■ 4.73
CSNK1E-206ENST00000413574 ZFYVE9O95405 1425 aa44.59■■■■■ 4.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms