RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 RTEL1-TNFRSF6BF6WH68 1400 aa13.41□□□□□ -0.26
HCG18-234ENST00000413358 CNTLNQ9NXG0 1405 aa13.41□□□□□ -0.26
HCG18-234ENST00000413358 KIF15Q9NS87 1388 aa13.41□□□□□ -0.26
HCG18-234ENST00000413358 REREQ9P2R6 1566 aa13.41□□□□□ -0.26
HCG18-234ENST00000413358 AGLP35573 1532 aa13.39□□□□□ -0.27
HCG18-234ENST00000413358 RRP7BPQ9NSQ0 103 aa13.39□□□□□ -0.27
HCG18-234ENST00000413358 NCOA1Q15788 1441 aa13.39□□□□□ -0.27
HCG18-234ENST00000413358 KIDINS220Q9ULH0 1771 aa13.38□□□□□ -0.27
HCG18-234ENST00000413358 ABCA6Q8N139 1617 aa13.38□□□□□ -0.27
HCG18-234ENST00000413358 NAIPQ13075 1403 aa13.38□□□□□ -0.27
HCG18-234ENST00000413358 DUOX2Q9NRD8 1548 aa13.37□□□□□ -0.27
HCG18-234ENST00000413358 PTPRTO14522 1441 aa13.37□□□□□ -0.27
HCG18-234ENST00000413358 SETD5Q9C0A6 1442 aa13.37□□□□□ -0.27
HCG18-234ENST00000413358 C3P01024 1663 aa13.34□□□□□ -0.27
HCG18-234ENST00000413358 ERBINQ96RT1 1412 aa13.34□□□□□ -0.27
HCG18-234ENST00000413358 ANKRD50Q9ULJ7 1429 aa13.34□□□□□ -0.27
HCG18-234ENST00000413358 ZMYM3Q14202 1370 aa13.33□□□□□ -0.27
HCG18-234ENST00000413358 RAB3GAP2Q9H2M9 1393 aa13.33□□□□□ -0.27
HCG18-234ENST00000413358 DISP3Q9P2K9 1392 aa13.33□□□□□ -0.27
HCG18-234ENST00000413358 GGT6Q6P531 493 aa13.33□□□□□ -0.28
HCG18-234ENST00000413358 SENP3Q9H4L4 574 aaPredicted RBP13.33□□□□□ -0.28
HCG18-234ENST00000413358 A2MP01023 1474 aa13.33□□□□□ -0.28
HCG18-234ENST00000413358 STRCQ7RTU9 1775 aa13.32□□□□□ -0.28
HCG18-234ENST00000413358 NPATQ14207 1427 aa13.32□□□□□ -0.28
HCG18-234ENST00000413358 PPP6R1Q9UPN7 881 aa13.31□□□□□ -0.28
HCG18-234ENST00000413358 EIF2AK4Q9P2K8 1649 aaKnown RBP13.31□□□□□ -0.28
HCG18-234ENST00000413358 DHX29Q7Z478 1369 aaKnown RBP13.3□□□□□ -0.28
HCG18-234ENST00000413358 PKD2Q13563 968 aa13.29□□□□□ -0.28
HCG18-234ENST00000413358 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
HCG18-234ENST00000413358 CAMSAP1Q5T5Y3 1602 aa13.27□□□□□ -0.29
HCG18-234ENST00000413358 MROH2AA6NES4 1674 aa13.27□□□□□ -0.29
HCG18-234ENST00000413358 UNC13BO14795 1591 aa13.26□□□□□ -0.29
HCG18-234ENST00000413358 IQSEC2Q5JU85 1478 aa13.26□□□□□ -0.29
HCG18-234ENST00000413358 ACIN1Q9UKV3 1341 aaKnown RBP13.25□□□□□ -0.29
HCG18-234ENST00000413358 RNF17Q9BXT8 1623 aaKnown RBP13.24□□□□□ -0.29
HCG18-234ENST00000413358 KIF3BO15066 747 aa13.24□□□□□ -0.29
HCG18-234ENST00000413358 TRIM52Q96A61 297 aa13.24□□□□□ -0.29
HCG18-234ENST00000413358 DEPDC5O75140 1603 aa13.24□□□□□ -0.29
HCG18-234ENST00000413358 PRDM15P57071 1507 aaPredicted RBP13.23□□□□□ -0.29
HCG18-234ENST00000413358 UBAP1LF5GYI3 381 aa13.23□□□□□ -0.29
HCG18-234ENST00000413358 HRCP23327 699 aa13.23□□□□□ -0.29
HCG18-234ENST00000413358 KDM5DQ9BY66 1539 aa13.23□□□□□ -0.29
HCG18-234ENST00000413358 KANK1Q14678 1352 aa13.22□□□□□ -0.29
HCG18-234ENST00000413358 CLTCQ00610 1675 aaKnown RBP13.22□□□□□ -0.29
HCG18-234ENST00000413358 PLA2R1Q13018 1463 aa13.22□□□□□ -0.29
HCG18-234ENST00000413358 LTBP4Q8N2S1 1624 aa13.21□□□□□ -0.29
HCG18-234ENST00000413358 SOCS7O14512 581 aa13.21□□□□□ -0.29
HCG18-234ENST00000413358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.292e-6■■□□□ 11.6
HCG18-234ENST00000413358 IQGAP3Q86VI3 1631 aa13.21□□□□□ -0.3
HCG18-234ENST00000413358 MROH1Q8NDA8 1641 aa13.21□□□□□ -0.3
HCG18-234ENST00000413358 NUP155O75694 1391 aa13.2□□□□□ -0.3
HCG18-234ENST00000413358 ZNF335Q9H4Z2 1342 aaPredicted RBP13.2□□□□□ -0.3
HCG18-234ENST00000413358 FAM135AQ9P2D6 1515 aa13.19□□□□□ -0.3
HCG18-234ENST00000413358 WASHC2CQ9Y4E1 1318 aa13.19□□□□□ -0.3
HCG18-234ENST00000413358 ILDR2Q71H61 639 aa13.19□□□□□ -0.3
HCG18-234ENST00000413358 CEP170BQ9Y4F5 1589 aaPredicted RBP13.19□□□□□ -0.3
HCG18-234ENST00000413358 PZPP20742 1482 aa13.18□□□□□ -0.3
HCG18-234ENST00000413358 MYO3AQ8NEV4 1616 aa13.18□□□□□ -0.3
HCG18-234ENST00000413358 ZC3H13Q5T200 1668 aaKnown RBP13.18□□□□□ -0.3
HCG18-234ENST00000413358 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
HCG18-234ENST00000413358 SPATA31D1Q6ZQQ2 1576 aa13.17□□□□□ -0.3
HCG18-234ENST00000413358 DHX57Q6P158 1386 aaKnown RBP13.17□□□□□ -0.3
HCG18-234ENST00000413358 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
HCG18-234ENST00000413358 VWDEQ8N2E2 1590 aa13.16□□□□□ -0.3
HCG18-234ENST00000413358 ZNF142P52746 1687 aaPredicted RBP13.16□□□□□ -0.3
HCG18-234ENST00000413358 ANKLE2Q86XL3 938 aa13.16□□□□□ -0.3
HCG18-234ENST00000413358 THEMISQ8N1K5 641 aaPredicted RBP13.16□□□□□ -0.3
HCG18-234ENST00000413358 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
HCG18-234ENST00000413358 TNRQ92752 1358 aa13.16□□□□□ -0.3
HCG18-234ENST00000413358 CEP152O94986 1710 aa13.16□□□□□ -0.3
HCG18-234ENST00000413358 ABCC3O15438 1527 aa13.15□□□□□ -0.3
HCG18-234ENST00000413358 TOM1O60784 492 aa13.15□□□□□ -0.3
HCG18-234ENST00000413358 CCER1Q8TC90 406 aaPredicted RBP13.15□□□□□ -0.3
HCG18-234ENST00000413358 TET3O43151 1660 aa13.15□□□□□ -0.31
HCG18-234ENST00000413358 LMTK2Q8IWU2 1503 aa13.14□□□□□ -0.31
HCG18-234ENST00000413358 EFCAB6Q5THR3 1501 aa13.13□□□□□ -0.31
HCG18-234ENST00000413358 FBXO31Q5XUX0 539 aaPredicted RBP13.13□□□□□ -0.31
HCG18-234ENST00000413358 MPHOSPH9Q99550 1183 aa13.13□□□□□ -0.31
HCG18-234ENST00000413358 PIP4K2BP78356 416 aa13.12□□□□□ -0.31
HCG18-234ENST00000413358 CPS1P31327 1500 aa13.09□□□□□ -0.31
HCG18-234ENST00000413358 PHF23Q9BUL5 403 aaPredicted RBP13.09□□□□□ -0.31
HCG18-234ENST00000413358 NLRP1Q9C000 1473 aa13.09□□□□□ -0.31
HCG18-234ENST00000413358 E9PCH4 1651 aa13.08□□□□□ -0.31
HCG18-234ENST00000413358 RPRD2Q5VT52 1461 aaKnown RBP13.08□□□□□ -0.32
HCG18-234ENST00000413358 FOXD1Q16676 465 aa13.07□□□□□ -0.32
HCG18-234ENST00000413358 CLSPNQ9HAW4 1339 aa13.06□□□□□ -0.32
HCG18-234ENST00000413358 UGGT1Q9NYU2 1555 aa13.06□□□□□ -0.32
HCG18-234ENST00000413358 NPHP4O75161 1426 aaPredicted RBP13.05□□□□□ -0.32
HCG18-234ENST00000413358 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
HCG18-234ENST00000413358 SPHKAPQ2M3C7 1700 aa13.05□□□□□ -0.32
HCG18-234ENST00000413358 HSPA1LP34931 641 aa13.05□□□□□ -0.32
HCG18-234ENST00000413358 POLR1AO95602 1720 aaPredicted RBP13.05□□□□□ -0.32
HCG18-234ENST00000413358 TRPM2O94759 1503 aa13.04□□□□□ -0.32
HCG18-234ENST00000413358 CCDC144AA2RUR9 1427 aa13.03□□□□□ -0.32
HCG18-234ENST00000413358 ANKRD30BQ9BXX2 1392 aa13.02□□□□□ -0.33
HCG18-234ENST00000413358 ERVK-7P63135 1459 aa13.02□□□□□ -0.33
HCG18-234ENST00000413358 STAG3Q9UJ98 1225 aa13.01□□□□□ -0.33
HCG18-234ENST00000413358 NEURL4Q96JN8 1562 aa13□□□□□ -0.33
HCG18-234ENST00000413358 MED14O60244 1454 aa13□□□□□ -0.33
HCG18-234ENST00000413358 EID1Q9Y6B2 187 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms