RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 ITGAEP38570 1179 aa20.2■□□□□ 0.82
SSB-203ENST00000413002 CLTCQ00610 1675 aaKnown RBP20.19■□□□□ 0.82
SSB-203ENST00000413002 WASHC2CQ9Y4E1 1318 aa20.18■□□□□ 0.82
SSB-203ENST00000413002 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
SSB-203ENST00000413002 ANKRD30AQ9BXX3 1397 aa20.17■□□□□ 0.82
SSB-203ENST00000413002 PTPRKQ15262 1439 aa20.17■□□□□ 0.82
SSB-203ENST00000413002 DUOX2Q9NRD8 1548 aa20.16■□□□□ 0.82
SSB-203ENST00000413002 NCOA1Q15788 1441 aa20.15■□□□□ 0.82
SSB-203ENST00000413002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.14■□□□□ 0.818e-7■■■□□ 17.7
SSB-203ENST00000413002 FBXO31Q5XUX0 539 aaPredicted RBP20.13■□□□□ 0.81
SSB-203ENST00000413002 MROH2AA6NES4 1674 aa20.12■□□□□ 0.81
SSB-203ENST00000413002 UHRF1BP1Q6BDS2 1440 aa20.11■□□□□ 0.81
SSB-203ENST00000413002 KDM5DQ9BY66 1539 aa20.11■□□□□ 0.81
SSB-203ENST00000413002 ERBINQ96RT1 1412 aa20.1■□□□□ 0.81
SSB-203ENST00000413002 ADGRL2O95490 1459 aa20.09■□□□□ 0.81
SSB-203ENST00000413002 PREX1Q8TCU6 1659 aa20.09■□□□□ 0.81
SSB-203ENST00000413002 RNF17Q9BXT8 1623 aaKnown RBP20.09■□□□□ 0.81
SSB-203ENST00000413002 MROH1Q8NDA8 1641 aa20.08■□□□□ 0.8
SSB-203ENST00000413002 EIF2AK4Q9P2K8 1649 aaKnown RBP20.08■□□□□ 0.8
SSB-203ENST00000413002 NPATQ14207 1427 aa20.08■□□□□ 0.8
SSB-203ENST00000413002 ABCC3O15438 1527 aa20.06■□□□□ 0.8
SSB-203ENST00000413002 POTEDQ86YR6 584 aa20.05■□□□□ 0.8
SSB-203ENST00000413002 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
SSB-203ENST00000413002 SETD1BQ9UPS6 1966 aaKnown RBP20.04■□□□□ 0.8
SSB-203ENST00000413002 ANKRD50Q9ULJ7 1429 aa20.03■□□□□ 0.8
SSB-203ENST00000413002 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.03■□□□□ 0.8
SSB-203ENST00000413002 PZPP20742 1482 aa20.03■□□□□ 0.8
SSB-203ENST00000413002 FAM135AQ9P2D6 1515 aa20.02■□□□□ 0.79
SSB-203ENST00000413002 TNRQ92752 1358 aa20.01■□□□□ 0.79
SSB-203ENST00000413002 CEP152O94986 1710 aa20■□□□□ 0.79
SSB-203ENST00000413002 PRDM15P57071 1507 aaPredicted RBP20■□□□□ 0.79
SSB-203ENST00000413002 ROCK1Q13464 1354 aa19.99■□□□□ 0.79
SSB-203ENST00000413002 KANK1Q14678 1352 aa19.99■□□□□ 0.79
SSB-203ENST00000413002 MYO3AQ8NEV4 1616 aa19.98■□□□□ 0.79
SSB-203ENST00000413002 PIAS4Q8N2W9 510 aaPredicted RBP19.97■□□□□ 0.79
SSB-203ENST00000413002 DEPDC5O75140 1603 aa19.96■□□□□ 0.79
SSB-203ENST00000413002 ZC3H13Q5T200 1668 aaKnown RBP19.96■□□□□ 0.79
SSB-203ENST00000413002 CAMSAP1Q5T5Y3 1602 aa19.95■□□□□ 0.78
SSB-203ENST00000413002 CEP170BQ9Y4F5 1589 aaPredicted RBP19.94■□□□□ 0.78
SSB-203ENST00000413002 NCKAP5LQ9HCH0 1330 aa19.94■□□□□ 0.78
SSB-203ENST00000413002 ERVK-7P63135 1459 aa19.93■□□□□ 0.78
SSB-203ENST00000413002 A2ML1A8K2U0 1454 aa19.92■□□□□ 0.78
SSB-203ENST00000413002 STRCQ7RTU9 1775 aa19.92■□□□□ 0.78
SSB-203ENST00000413002 VWDEQ8N2E2 1590 aa19.91■□□□□ 0.78
SSB-203ENST00000413002 CFAP65Q6ZU64 1925 aaKnown RBP19.9■□□□□ 0.78
SSB-203ENST00000413002 ARHGAP31Q2M1Z3 1444 aa19.9■□□□□ 0.78
SSB-203ENST00000413002 SPATA31D1Q6ZQQ2 1576 aa19.9■□□□□ 0.78
SSB-203ENST00000413002 ZNF142P52746 1687 aaPredicted RBP19.89■□□□□ 0.77
SSB-203ENST00000413002 LMTK2Q8IWU2 1503 aa19.88■□□□□ 0.77
SSB-203ENST00000413002 NUP155O75694 1391 aa19.87■□□□□ 0.77
SSB-203ENST00000413002 DMRT2Q9Y5R5 561 aa19.87■□□□□ 0.77
SSB-203ENST00000413002 NLRP1Q9C000 1473 aa19.86■□□□□ 0.77
SSB-203ENST00000413002 NAIPQ13075 1403 aa19.85■□□□□ 0.77
SSB-203ENST00000413002 UNC13BO14795 1591 aa19.84■□□□□ 0.77
SSB-203ENST00000413002 UGGT1Q9NYU2 1555 aa19.84■□□□□ 0.77
SSB-203ENST00000413002 THEMISQ8N1K5 641 aaPredicted RBP19.84■□□□□ 0.77
SSB-203ENST00000413002 EFCAB6Q5THR3 1501 aa19.84■□□□□ 0.77
SSB-203ENST00000413002 PLA2R1Q13018 1463 aa19.82■□□□□ 0.76
SSB-203ENST00000413002 PKD2Q13563 968 aa19.82■□□□□ 0.76
SSB-203ENST00000413002 IDI1Q13907 227 aa19.81■□□□□ 0.76
SSB-203ENST00000413002 PTPRTO14522 1441 aa19.81■□□□□ 0.76
SSB-203ENST00000413002 NOS1P29475 1434 aa19.79■□□□□ 0.76
SSB-203ENST00000413002 ANKLE2Q86XL3 938 aa19.79■□□□□ 0.76
SSB-203ENST00000413002 STAG3Q9UJ98 1225 aa19.79■□□□□ 0.76
SSB-203ENST00000413002 SYNMO15061 1565 aa19.78■□□□□ 0.76
SSB-203ENST00000413002 HFM1A2PYH4 1435 aa19.78■□□□□ 0.76
SSB-203ENST00000413002 TRIM52Q96A61 297 aa19.78■□□□□ 0.76
SSB-203ENST00000413002 TET3O43151 1660 aa19.78■□□□□ 0.76
SSB-203ENST00000413002 IQGAP3Q86VI3 1631 aa19.76■□□□□ 0.75
SSB-203ENST00000413002 PIK3C2BO00750 1634 aa19.75■□□□□ 0.75
SSB-203ENST00000413002 GCC2Q8IWJ2 1684 aa19.75■□□□□ 0.75
SSB-203ENST00000413002 RPRD2Q5VT52 1461 aaKnown RBP19.74■□□□□ 0.75
SSB-203ENST00000413002 ILDR1Q86SU0 546 aaPredicted RBP19.74■□□□□ 0.75
SSB-203ENST00000413002 E9PCH4 1651 aa19.74■□□□□ 0.75
SSB-203ENST00000413002 ZNF335Q9H4Z2 1342 aaPredicted RBP19.74■□□□□ 0.75
SSB-203ENST00000413002 LTKP29376 864 aa19.73■□□□□ 0.75
SSB-203ENST00000413002 CERKQ8TCT0 537 aa19.73■□□□□ 0.75
SSB-203ENST00000413002 UBR1Q8IWV7 1749 aa19.73■□□□□ 0.75
SSB-203ENST00000413002 CHGAP10645 457 aaKnown RBP19.72■□□□□ 0.75
SSB-203ENST00000413002 TXNDC2Q86VQ3 553 aa19.72■□□□□ 0.75
SSB-203ENST00000413002 NEURL4Q96JN8 1562 aa19.72■□□□□ 0.75
SSB-203ENST00000413002 SLC52A1Q9NWF4 448 aa19.72■□□□□ 0.75
SSB-203ENST00000413002 NPHP4O75161 1426 aaPredicted RBP19.7■□□□□ 0.74
SSB-203ENST00000413002 TMEM2Q9UHN6 1383 aa19.69■□□□□ 0.74
SSB-203ENST00000413002 POLR1AO95602 1720 aaPredicted RBP19.68■□□□□ 0.74
SSB-203ENST00000413002 SLC4A1APQ9BWU0 796 aaKnown RBP19.67■□□□□ 0.74
SSB-203ENST00000413002 EID1Q9Y6B2 187 aa19.67■□□□□ 0.74
SSB-203ENST00000413002 ARHGAP23Q9P227 1491 aa19.67■□□□□ 0.74
SSB-203ENST00000413002 ADRA2BP18089 450 aa19.66■□□□□ 0.74
SSB-203ENST00000413002 SCAF11Q99590 1463 aaKnown RBP19.66■□□□□ 0.74
SSB-203ENST00000413002 SLIT1O75093 1534 aa19.66■□□□□ 0.74
SSB-203ENST00000413002 LTBP4Q8N2S1 1624 aa19.65■□□□□ 0.74
SSB-203ENST00000413002 MED14O60244 1454 aa19.65■□□□□ 0.74
SSB-203ENST00000413002 ADGRB3O60242 1522 aa19.65■□□□□ 0.74
SSB-203ENST00000413002 NUTM2DQ5VT03 806 aaPredicted RBP19.64■□□□□ 0.73
SSB-203ENST00000413002 SETD5Q9C0A6 1442 aa19.63■□□□□ 0.73
SSB-203ENST00000413002 FBXO41Q8TF61 875 aa19.63■□□□□ 0.73
SSB-203ENST00000413002 IQGAP1P46940 1657 aa19.61■□□□□ 0.73
SSB-203ENST00000413002 BCANQ96GW7 911 aa19.6■□□□□ 0.73
SSB-203ENST00000413002 TMEM131LA2VDJ0 1609 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms