RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 C11orf95C9JLR9 678 aaPredicted RBP34.34■■■■□ 3.09
VRK2-202ENST00000412104 PLA2R1Q13018 1463 aa34.33■■■■□ 3.09
VRK2-202ENST00000412104 CNTLNQ9NXG0 1405 aa34.32■■■■□ 3.09
VRK2-202ENST00000412104 KDM5CP41229 1560 aa34.32■■■■□ 3.08
VRK2-202ENST00000412104 ADGRL1O94910 1474 aa34.31■■■■□ 3.08
VRK2-202ENST00000412104 ATP7AQ04656 1500 aa34.31■■■■□ 3.08
VRK2-202ENST00000412104 USP47Q96K76 1375 aa34.28■■■■□ 3.08
VRK2-202ENST00000412104 NPM1P06748 294 aaKnown RBP eCLIP34.26■■■■□ 3.08
VRK2-202ENST00000412104 ATP10AO60312 1499 aa34.25■■■■□ 3.07
VRK2-202ENST00000412104 SCAPERQ9BY12 1400 aa34.25■■■■□ 3.07
VRK2-202ENST00000412104 DEPDC5O75140 1603 aa34.24■■■■□ 3.07
VRK2-202ENST00000412104 KIF7Q2M1P5 1343 aa34.23■■■■□ 3.07
VRK2-202ENST00000412104 DCAF11Q8TEB1 546 aa34.23■■■■□ 3.07
VRK2-202ENST00000412104 BCORL1Q5H9F3 1711 aa34.21■■■■□ 3.07
VRK2-202ENST00000412104 KDM2AQ9Y2K7 1162 aa34.2■■■■□ 3.07
VRK2-202ENST00000412104 E9PCH4 1651 aa34.17■■■■□ 3.06
VRK2-202ENST00000412104 A2MP01023 1474 aa34.15■■■■□ 3.06
VRK2-202ENST00000412104 CFAP74Q9C0B2 1584 aa34.14■■■■□ 3.06
VRK2-202ENST00000412104 TRPM1Q7Z4N2 1603 aa34.14■■■■□ 3.06
VRK2-202ENST00000412104 EIF2AK4Q9P2K8 1649 aaKnown RBP34.14■■■■□ 3.06
VRK2-202ENST00000412104 PRAG1Q86YV5 1406 aa34.13■■■■□ 3.05
VRK2-202ENST00000412104 CARD11Q9BXL7 1154 aa34.13■■■■□ 3.05
VRK2-202ENST00000412104 KIDINS220Q9ULH0 1771 aa34.1■■■■□ 3.05
VRK2-202ENST00000412104 TET3O43151 1660 aa34.1■■■■□ 3.05
VRK2-202ENST00000412104 VWDEQ8N2E2 1590 aa34.09■■■■□ 3.05
VRK2-202ENST00000412104 ZNF518AQ6AHZ1 1483 aa34.09■■■■□ 3.05
VRK2-202ENST00000412104 CD109Q6YHK3 1445 aa34.09■■■■□ 3.05
VRK2-202ENST00000412104 RGL3Q3MIN7 710 aa34.08■■■■□ 3.05
VRK2-202ENST00000412104 ROCK2O75116 1388 aaKnown RBP34.06■■■■□ 3.04
VRK2-202ENST00000412104 DHX29Q7Z478 1369 aaKnown RBP34.06■■■■□ 3.04
VRK2-202ENST00000412104 SPHKAPQ2M3C7 1700 aa34.06■■■■□ 3.04
VRK2-202ENST00000412104 MYT1LQ9UL68 1186 aa34.06■■■■□ 3.04
VRK2-202ENST00000412104 TRPM2O94759 1503 aa34.05■■■■□ 3.04
VRK2-202ENST00000412104 PRDM15P57071 1507 aaPredicted RBP34.05■■■■□ 3.04
VRK2-202ENST00000412104 ARID4BQ4LE39 1312 aaPredicted RBP34.03■■■■□ 3.04
VRK2-202ENST00000412104 MROH1Q8NDA8 1641 aa34.03■■■■□ 3.04
VRK2-202ENST00000412104 KANK1Q14678 1352 aa34.01■■■■□ 3.04
VRK2-202ENST00000412104 PTPRTO14522 1441 aa33.99■■■■□ 3.03
VRK2-202ENST00000412104 POGZQ7Z3K3 1410 aa33.99■■■■□ 3.03
VRK2-202ENST00000412104 CEP152O94986 1710 aa33.99■■■■□ 3.03
VRK2-202ENST00000412104 LAMC1P11047 1609 aa33.99■■■■□ 3.03
VRK2-202ENST00000412104 KIF3BO15066 747 aa33.98■■■■□ 3.03
VRK2-202ENST00000412104 PRKRIP1Q9H875 184 aaPredicted RBP33.98■■■■□ 3.03
VRK2-202ENST00000412104 GPRASP1Q5JY77 1395 aa33.96■■■■□ 3.03
VRK2-202ENST00000412104 CLTCL1P53675 1640 aa33.95■■■■□ 3.03
VRK2-202ENST00000412104 ST20-MTHFSA0A0A6YYL1 179 aa33.94■■■■□ 3.02
VRK2-202ENST00000412104 HECW2Q9P2P5 1572 aa33.92■■■■□ 3.02
VRK2-202ENST00000412104 POLR3GLQ9BT43 218 aa33.91■■■■□ 3.02
VRK2-202ENST00000412104 MLH3Q9UHC1 1453 aa33.9■■■■□ 3.02
VRK2-202ENST00000412104 RNF17Q9BXT8 1623 aaKnown RBP33.89■■■■□ 3.02
VRK2-202ENST00000412104 NBPF1Q3BBV0 1214 aa33.89■■■■□ 3.02
VRK2-202ENST00000412104 NEO1Q92859 1461 aa33.88■■■■□ 3.01
VRK2-202ENST00000412104 EFCAB6Q5THR3 1501 aa33.87■■■■□ 3.01
VRK2-202ENST00000412104 FRMPD1Q5SYB0 1578 aa33.85■■■■□ 3.01
VRK2-202ENST00000412104 MADDQ8WXG6 1647 aa33.85■■■■□ 3.01
VRK2-202ENST00000412104 PPRC1Q5VV67 1664 aaKnown RBP33.83■■■■□ 3.01
VRK2-202ENST00000412104 CCDC184Q52MB2 194 aa33.83■■■■□ 3.01
VRK2-202ENST00000412104 LMTK2Q8IWU2 1503 aa33.82■■■■□ 3.01
VRK2-202ENST00000412104 ABCA6Q8N139 1617 aa33.82■■■■□ 3
VRK2-202ENST00000412104 MAP3K4Q9Y6R4 1608 aa33.82■■■■□ 3
VRK2-202ENST00000412104 NEURL4Q96JN8 1562 aa33.8■■■■□ 3
VRK2-202ENST00000412104 RIMBP3CA6NJZ7 1639 aa33.79■■■■□ 3
VRK2-202ENST00000412104 RIMBP3BA6NNM3 1639 aa33.79■■■■□ 3
VRK2-202ENST00000412104 RIMBP3Q9UFD9 1639 aa33.79■■■■□ 3
VRK2-202ENST00000412104 CYB5RLQ6IPT4 315 aa33.74■■■□□ 2.99
VRK2-202ENST00000412104 MRS2Q9HD23 443 aa33.74■■■□□ 2.99
VRK2-202ENST00000412104 UGGT1Q9NYU2 1555 aa33.73■■■□□ 2.99
VRK2-202ENST00000412104 HNRNPUQ00839 825 aaKnown RBP eCLIP33.73■■■□□ 2.99
VRK2-202ENST00000412104 COL17A1Q9UMD9 1497 aaPredicted RBP33.72■■■□□ 2.99
VRK2-202ENST00000412104 GLI2P10070 1586 aa33.72■■■□□ 2.99
VRK2-202ENST00000412104 SUPT16HQ9Y5B9 1047 aaKnown RBP33.72■■■□□ 2.99
VRK2-202ENST00000412104 STAC3Q96MF2 364 aa33.71■■■□□ 2.99
VRK2-202ENST00000412104 RICTORQ6R327 1708 aa33.71■■■□□ 2.99
VRK2-202ENST00000412104 KIF1BO60333 1816 aa33.71■■■□□ 2.99
VRK2-202ENST00000412104 IQGAP1P46940 1657 aa33.69■■■□□ 2.98
VRK2-202ENST00000412104 RAPGEF3O95398 923 aa33.67■■■□□ 2.98
VRK2-202ENST00000412104 DIP2CQ9Y2E4 1556 aa33.67■■■□□ 2.98
VRK2-202ENST00000412104 TESK2Q96S53 571 aa33.66■■■□□ 2.98
VRK2-202ENST00000412104 MROH2AA6NES4 1674 aa33.64■■■□□ 2.98
VRK2-202ENST00000412104 KIAA1210Q9ULL0 1709 aa33.63■■■□□ 2.97
VRK2-202ENST00000412104 DISP3Q9P2K9 1392 aa33.63■■■□□ 2.97
VRK2-202ENST00000412104 IFT172Q9UG01 1749 aa33.62■■■□□ 2.97
VRK2-202ENST00000412104 FAM9BQ8IZU0 186 aa33.61■■■□□ 2.97
VRK2-202ENST00000412104 ABCC3O15438 1527 aa33.61■■■□□ 2.97
VRK2-202ENST00000412104 MYOM2P54296 1465 aa33.61■■■□□ 2.97
VRK2-202ENST00000412104 NPATQ14207 1427 aa33.6■■■□□ 2.97
VRK2-202ENST00000412104 CNGB1Q14028 1251 aaPredicted RBP33.59■■■□□ 2.97
VRK2-202ENST00000412104 GGT6Q6P531 493 aa33.59■■■□□ 2.97
VRK2-202ENST00000412104 DIP2BQ9P265 1576 aa33.58■■■□□ 2.97
VRK2-202ENST00000412104 CAMSAP1Q5T5Y3 1602 aa33.56■■■□□ 2.96
VRK2-202ENST00000412104 ADGRB3O60242 1522 aa33.56■■■□□ 2.96
VRK2-202ENST00000412104 SCAF11Q99590 1463 aaKnown RBP33.56■■■□□ 2.96
VRK2-202ENST00000412104 TMF1P82094 1093 aa33.53■■■□□ 2.96
VRK2-202ENST00000412104 KTN1Q86UP2 1357 aaKnown RBP33.53■■■□□ 2.96
VRK2-202ENST00000412104 CFAP65Q6ZU64 1925 aaKnown RBP33.51■■■□□ 2.96
VRK2-202ENST00000412104 WASHC2CQ9Y4E1 1318 aa33.51■■■□□ 2.95
VRK2-202ENST00000412104 YEATS2Q9ULM3 1422 aa33.49■■■□□ 2.95
VRK2-202ENST00000412104 ZC3H13Q5T200 1668 aaKnown RBP33.47■■■□□ 2.95
VRK2-202ENST00000412104 NRXN1Q9ULB1 1477 aa33.47■■■□□ 2.95
VRK2-202ENST00000412104 RALBP1Q15311 655 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms