RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 RNF17Q9BXT8 1623 aaKnown RBP30.04■■■□□ 2.4
PTPA-208ENST00000411917 PRDM15P57071 1507 aaPredicted RBP30■■■□□ 2.39
PTPA-208ENST00000411917 FAM135AQ9P2D6 1515 aa29.99■■■□□ 2.39
PTPA-208ENST00000411917 VWDEQ8N2E2 1590 aa29.97■■■□□ 2.39
PTPA-208ENST00000411917 PPP6R1Q9UPN7 881 aa29.95■■■□□ 2.39
PTPA-208ENST00000411917 MROH1Q8NDA8 1641 aa29.93■■■□□ 2.38
PTPA-208ENST00000411917 IQGAP3Q86VI3 1631 aa29.93■■■□□ 2.38
PTPA-208ENST00000411917 KIF3BO15066 747 aa29.92■■■□□ 2.38
PTPA-208ENST00000411917 DHX57Q6P158 1386 aaKnown RBP29.91■■■□□ 2.38
PTPA-208ENST00000411917 LMTK2Q8IWU2 1503 aa29.91■■■□□ 2.38
PTPA-208ENST00000411917 NUP155O75694 1391 aa29.9■■■□□ 2.38
PTPA-208ENST00000411917 PZPP20742 1482 aa29.9■■■□□ 2.38
PTPA-208ENST00000411917 CLSPNQ9HAW4 1339 aa29.9■■■□□ 2.38
PTPA-208ENST00000411917 KANK1Q14678 1352 aa29.89■■■□□ 2.37
PTPA-208ENST00000411917 TRIM52Q96A61 297 aa29.85■■■□□ 2.37
PTPA-208ENST00000411917 SIGLEC1Q9BZZ2 1709 aa29.82■■■□□ 2.36
PTPA-208ENST00000411917 ZC3H13Q5T200 1668 aaKnown RBP29.82■■■□□ 2.36
PTPA-208ENST00000411917 MPHOSPH9Q99550 1183 aa29.82■■■□□ 2.36
PTPA-208ENST00000411917 SLC4A1APQ9BWU0 796 aaKnown RBP29.78■■■□□ 2.36
PTPA-208ENST00000411917 TET3O43151 1660 aa29.78■■■□□ 2.36
PTPA-208ENST00000411917 ABCC3O15438 1527 aa29.77■■■□□ 2.36
PTPA-208ENST00000411917 ARHGAP31Q2M1Z3 1444 aa29.75■■■□□ 2.35
PTPA-208ENST00000411917 RPRD2Q5VT52 1461 aaKnown RBP29.74■■■□□ 2.35
PTPA-208ENST00000411917 EFCAB6Q5THR3 1501 aa29.73■■■□□ 2.35
PTPA-208ENST00000411917 GGT6Q6P531 493 aa29.73■■■□□ 2.35
PTPA-208ENST00000411917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.73■■■□□ 2.35
PTPA-208ENST00000411917 CNTLNQ9NXG0 1405 aa29.71■■■□□ 2.35
PTPA-208ENST00000411917 WASHC2CQ9Y4E1 1318 aa29.7■■■□□ 2.34
PTPA-208ENST00000411917 CCER1Q8TC90 406 aaPredicted RBP29.69■■■□□ 2.34
PTPA-208ENST00000411917 PKD2Q13563 968 aa29.67■■■□□ 2.34
PTPA-208ENST00000411917 ARID4BQ4LE39 1312 aaPredicted RBP29.66■■■□□ 2.34
PTPA-208ENST00000411917 ANKRD30BQ9BXX2 1392 aa29.65■■■□□ 2.34
PTPA-208ENST00000411917 CAMSAP1Q5T5Y3 1602 aa29.63■■■□□ 2.33
PTPA-208ENST00000411917 PTPRTO14522 1441 aa29.63■■■□□ 2.33
PTPA-208ENST00000411917 CEP152O94986 1710 aa29.63■■■□□ 2.33
PTPA-208ENST00000411917 E9PCH4 1651 aa29.62■■■□□ 2.33
PTPA-208ENST00000411917 MROH2AA6NES4 1674 aa29.61■■■□□ 2.33
PTPA-208ENST00000411917 NPATQ14207 1427 aa29.61■■■□□ 2.33
PTPA-208ENST00000411917 TRPM2O94759 1503 aa29.55■■■□□ 2.32
PTPA-208ENST00000411917 PLA2R1Q13018 1463 aa29.55■■■□□ 2.32
PTPA-208ENST00000411917 NOS1P29475 1434 aa29.54■■■□□ 2.32
PTPA-208ENST00000411917 ADAMTSL3P82987 1691 aa29.54■■■□□ 2.32
PTPA-208ENST00000411917 CLTCQ00610 1675 aaKnown RBP29.54■■■□□ 2.32
PTPA-208ENST00000411917 ESF1Q9H501 851 aaKnown RBP29.54■■■□□ 2.32
PTPA-208ENST00000411917 MLECQ14165 292 aa29.51■■■□□ 2.31
PTPA-208ENST00000411917 ZMYM3Q14202 1370 aa29.51■■■□□ 2.31
PTPA-208ENST00000411917 SPHKAPQ2M3C7 1700 aa29.5■■■□□ 2.31
PTPA-208ENST00000411917 TIMELESSQ9UNS1 1208 aa29.49■■■□□ 2.31
PTPA-208ENST00000411917 FER1L4A9Z1Z3 1794 aa29.49■■■□□ 2.31
PTPA-208ENST00000411917 SPATA31D1Q6ZQQ2 1576 aa29.47■■■□□ 2.31
PTPA-208ENST00000411917 FOXD1Q16676 465 aa29.47■■■□□ 2.31
PTPA-208ENST00000411917 NEURL4Q96JN8 1562 aa29.47■■■□□ 2.31
PTPA-208ENST00000411917 ERVK-7P63135 1459 aa29.46■■■□□ 2.31
PTPA-208ENST00000411917 CCDC144AA2RUR9 1427 aa29.45■■■□□ 2.31
PTPA-208ENST00000411917 ZEB1P37275 1124 aaPredicted RBP29.45■■■□□ 2.31
PTPA-208ENST00000411917 PREX1Q8TCU6 1659 aa29.43■■■□□ 2.3
PTPA-208ENST00000411917 MADDQ8WXG6 1647 aa29.42■■■□□ 2.3
PTPA-208ENST00000411917 SLC52A1Q9NWF4 448 aa29.4■■■□□ 2.3
PTPA-208ENST00000411917 PIK3C2BO00750 1634 aa29.39■■■□□ 2.3
PTPA-208ENST00000411917 SYNMO15061 1565 aa29.38■■■□□ 2.29
PTPA-208ENST00000411917 C3P01024 1663 aa29.35■■■□□ 2.29
PTPA-208ENST00000411917 CLTCL1P53675 1640 aa29.34■■■□□ 2.29
PTPA-208ENST00000411917 SIN3AQ96ST3 1273 aa29.34■■■□□ 2.29
PTPA-208ENST00000411917 RIMS1Q86UR5 1692 aaKnown RBP29.32■■■□□ 2.28
PTPA-208ENST00000411917 SPATA31E1Q6ZUB1 1445 aa29.31■■■□□ 2.28
PTPA-208ENST00000411917 NLRP1Q9C000 1473 aa29.29■■■□□ 2.28
PTPA-208ENST00000411917 TNRQ92752 1358 aa29.29■■■□□ 2.28
PTPA-208ENST00000411917 FBXO31Q5XUX0 539 aaPredicted RBP29.28■■■□□ 2.28
PTPA-208ENST00000411917 ADGRB3O60242 1522 aa29.27■■■□□ 2.28
PTPA-208ENST00000411917 PTPRMP28827 1452 aa29.27■■■□□ 2.28
PTPA-208ENST00000411917 KDM5AP29375 1690 aaKnown RBP29.27■■■□□ 2.28
PTPA-208ENST00000411917 TONSLQ96HA7 1378 aa29.26■■■□□ 2.28
PTPA-208ENST00000411917 STAC3Q96MF2 364 aa29.26■■■□□ 2.27
PTPA-208ENST00000411917 NEUROD1Q13562 356 aa29.24■■■□□ 2.27
PTPA-208ENST00000411917 UGGT1Q9NYU2 1555 aa29.24■■■□□ 2.27
PTPA-208ENST00000411917 IDI1Q13907 227 aa29.22■■■□□ 2.27
PTPA-208ENST00000411917 KIF1BO60333 1816 aa29.21■■■□□ 2.27
PTPA-208ENST00000411917 RPGRIP1LQ68CZ1 1315 aa29.18■■■□□ 2.26
PTPA-208ENST00000411917 TMEM131LA2VDJ0 1609 aa29.17■■■□□ 2.26
PTPA-208ENST00000411917 CFAP65Q6ZU64 1925 aaKnown RBP29.17■■■□□ 2.26
PTPA-208ENST00000411917 CEBPAP49715 358 aaPredicted RBP29.16■■■□□ 2.26
PTPA-208ENST00000411917 KDM4FA0A1W2PPD8 638 aa29.14■■■□□ 2.26
PTPA-208ENST00000411917 L3MBTL2Q969R5 705 aa29.14■■■□□ 2.26
PTPA-208ENST00000411917 SETD1BQ9UPS6 1966 aaKnown RBP29.13■■■□□ 2.25
PTPA-208ENST00000411917 A2ML1A8K2U0 1454 aa29.12■■■□□ 2.25
PTPA-208ENST00000411917 MYO3AQ8NEV4 1616 aa29.12■■■□□ 2.25
PTPA-208ENST00000411917 UHRF1BP1Q6BDS2 1440 aa29.11■■■□□ 2.25
PTPA-208ENST00000411917 PPP1R15AO75807 674 aaPredicted RBP29.11■■■□□ 2.25
PTPA-208ENST00000411917 MYOM2P54296 1465 aa29.1■■■□□ 2.25
PTPA-208ENST00000411917 ZFYVE9O95405 1425 aa29.1■■■□□ 2.25
PTPA-208ENST00000411917 ZNF142P52746 1687 aaPredicted RBP29.09■■■□□ 2.25
PTPA-208ENST00000411917 UBR1Q8IWV7 1749 aa29.06■■■□□ 2.24
PTPA-208ENST00000411917 IFT172Q9UG01 1749 aa29.06■■■□□ 2.24
PTPA-208ENST00000411917 CEP170BQ9Y4F5 1589 aaPredicted RBP29.05■■■□□ 2.24
PTPA-208ENST00000411917 NEXMIFQ5QGS0 1516 aa29.04■■■□□ 2.24
PTPA-208ENST00000411917 NRXN1Q9ULB1 1477 aa29.04■■■□□ 2.24
PTPA-208ENST00000411917 SLIT1O75093 1534 aa29.02■■■□□ 2.24
PTPA-208ENST00000411917 RGL3Q3MIN7 710 aa29.01■■■□□ 2.23
PTPA-208ENST00000411917 STAG3Q9UJ98 1225 aa29.01■■■□□ 2.23
PTPA-208ENST00000411917 ARHGAP23Q9P227 1491 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms