RNA–Protein interactions for RNA: ENST00000411792.1

RFC4-203, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-203ENST00000411792 ANKRD30AQ9BXX3 1397 aa28■■■□□ 2.07
RFC4-203ENST00000411792 ILDR1Q86SU0 546 aaPredicted RBP28■■■□□ 2.07
RFC4-203ENST00000411792 RRP7BPQ9NSQ0 103 aa28■■■□□ 2.07
RFC4-203ENST00000411792 CHIC2Q9UKJ5 165 aa28■■■□□ 2.07
RFC4-203ENST00000411792 MROH2AA6NES4 1674 aa27.98■■■□□ 2.07
RFC4-203ENST00000411792 FAM135AQ9P2D6 1515 aa27.95■■■□□ 2.06
RFC4-203ENST00000411792 EIF2AK4Q9P2K8 1649 aaKnown RBP27.95■■■□□ 2.06
RFC4-203ENST00000411792 WASHC2CQ9Y4E1 1318 aa27.94■■■□□ 2.06
RFC4-203ENST00000411792 ERBINQ96RT1 1412 aa27.93■■■□□ 2.06
RFC4-203ENST00000411792 KDM5DQ9BY66 1539 aa27.93■■■□□ 2.06
RFC4-203ENST00000411792 NPATQ14207 1427 aa27.92■■■□□ 2.06
RFC4-203ENST00000411792 NCOA1Q15788 1441 aa27.9■■■□□ 2.06
RFC4-203ENST00000411792 ADGRL2O95490 1459 aa27.89■■■□□ 2.05
RFC4-203ENST00000411792 RNF17Q9BXT8 1623 aaKnown RBP27.89■■■□□ 2.05
RFC4-203ENST00000411792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.87■■■□□ 2.05
RFC4-203ENST00000411792 ITGAEP38570 1179 aa27.85■■■□□ 2.05
RFC4-203ENST00000411792 PTPRKQ15262 1439 aa27.84■■■□□ 2.05
RFC4-203ENST00000411792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.81■■■□□ 2.045e-8■■□□□ 12.5
RFC4-203ENST00000411792 KANK1Q14678 1352 aa27.81■■■□□ 2.04
RFC4-203ENST00000411792 RRBP1Q9P2E9 1410 aaKnown RBP27.8■■■□□ 2.04
RFC4-203ENST00000411792 PZPP20742 1482 aa27.8■■■□□ 2.04
RFC4-203ENST00000411792 ZC3H13Q5T200 1668 aaKnown RBP27.8■■■□□ 2.04
RFC4-203ENST00000411792 ABCC3O15438 1527 aa27.79■■■□□ 2.04
RFC4-203ENST00000411792 ANKRD50Q9ULJ7 1429 aa27.78■■■□□ 2.04
RFC4-203ENST00000411792 ROCK1Q13464 1354 aa27.78■■■□□ 2.04
RFC4-203ENST00000411792 DMRT2Q9Y5R5 561 aa27.78■■■□□ 2.04
RFC4-203ENST00000411792 MROH1Q8NDA8 1641 aa27.78■■■□□ 2.04
RFC4-203ENST00000411792 PRDM15P57071 1507 aaPredicted RBP27.77■■■□□ 2.04
RFC4-203ENST00000411792 FBXO31Q5XUX0 539 aaPredicted RBP27.76■■■□□ 2.03
RFC4-203ENST00000411792 MYO3AQ8NEV4 1616 aa27.75■■■□□ 2.03
RFC4-203ENST00000411792 STRCQ7RTU9 1775 aa27.75■■■□□ 2.03
RFC4-203ENST00000411792 TNRQ92752 1358 aa27.73■■■□□ 2.03
RFC4-203ENST00000411792 DEPDC5O75140 1603 aa27.71■■■□□ 2.03
RFC4-203ENST00000411792 CAMSAP1Q5T5Y3 1602 aa27.71■■■□□ 2.03
RFC4-203ENST00000411792 CEP170BQ9Y4F5 1589 aaPredicted RBP27.7■■■□□ 2.03
RFC4-203ENST00000411792 CEP152O94986 1710 aa27.69■■■□□ 2.02
RFC4-203ENST00000411792 ZNF142P52746 1687 aaPredicted RBP27.68■■■□□ 2.02
RFC4-203ENST00000411792 FBXO41Q8TF61 875 aa27.65■■■□□ 2.02
RFC4-203ENST00000411792 NCKAP5LQ9HCH0 1330 aa27.65■■■□□ 2.02
RFC4-203ENST00000411792 A2ML1A8K2U0 1454 aa27.64■■■□□ 2.02
RFC4-203ENST00000411792 PTPRTO14522 1441 aa27.63■■■□□ 2.01
RFC4-203ENST00000411792 ARHGAP31Q2M1Z3 1444 aa27.63■■■□□ 2.01
RFC4-203ENST00000411792 ERVK-7P63135 1459 aa27.63■■■□□ 2.01
RFC4-203ENST00000411792 NLRP1Q9C000 1473 aa27.62■■■□□ 2.01
RFC4-203ENST00000411792 LMTK2Q8IWU2 1503 aa27.61■■■□□ 2.01
RFC4-203ENST00000411792 SPATA31D1Q6ZQQ2 1576 aa27.6■■■□□ 2.01
RFC4-203ENST00000411792 VWDEQ8N2E2 1590 aa27.6■■■□□ 2.01
RFC4-203ENST00000411792 CFAP65Q6ZU64 1925 aaKnown RBP27.59■■■□□ 2.01
RFC4-203ENST00000411792 CERKQ8TCT0 537 aa27.59■■■□□ 2.01
RFC4-203ENST00000411792 PKD2Q13563 968 aa27.58■■■□□ 2.01
RFC4-203ENST00000411792 PLA2R1Q13018 1463 aa27.57■■■□□ 2
RFC4-203ENST00000411792 UNC13BO14795 1591 aa27.55■■■□□ 2
RFC4-203ENST00000411792 EFCAB6Q5THR3 1501 aa27.53■■■□□ 2
RFC4-203ENST00000411792 THEMISQ8N1K5 641 aaPredicted RBP27.53■■■□□ 2
RFC4-203ENST00000411792 UGGT1Q9NYU2 1555 aa27.52■■■□□ 2
RFC4-203ENST00000411792 NUP155O75694 1391 aa27.5■■□□□ 1.99
RFC4-203ENST00000411792 RPRD2Q5VT52 1461 aaKnown RBP27.49■■□□□ 1.99
RFC4-203ENST00000411792 NAIPQ13075 1403 aa27.48■■□□□ 1.99
RFC4-203ENST00000411792 TET3O43151 1660 aa27.47■■□□□ 1.99
RFC4-203ENST00000411792 ANKLE2Q86XL3 938 aa27.47■■□□□ 1.99
RFC4-203ENST00000411792 HFM1A2PYH4 1435 aa27.45■■□□□ 1.98
RFC4-203ENST00000411792 STAG3Q9UJ98 1225 aa27.45■■□□□ 1.98
RFC4-203ENST00000411792 IQGAP3Q86VI3 1631 aa27.44■■□□□ 1.98
RFC4-203ENST00000411792 GCC2Q8IWJ2 1684 aa27.43■■□□□ 1.98
RFC4-203ENST00000411792 POLR1AO95602 1720 aaPredicted RBP27.43■■□□□ 1.98
RFC4-203ENST00000411792 NOS1P29475 1434 aa27.42■■□□□ 1.98
RFC4-203ENST00000411792 ZNF335Q9H4Z2 1342 aaPredicted RBP27.41■■□□□ 1.98
RFC4-203ENST00000411792 SLC52A1Q9NWF4 448 aa27.39■■□□□ 1.98
RFC4-203ENST00000411792 LTBP4Q8N2S1 1624 aa27.38■■□□□ 1.97
RFC4-203ENST00000411792 IDI1Q13907 227 aa27.37■■□□□ 1.97
RFC4-203ENST00000411792 TRIM52Q96A61 297 aa27.37■■□□□ 1.97
RFC4-203ENST00000411792 SYNMO15061 1565 aa27.36■■□□□ 1.97
RFC4-203ENST00000411792 NEURL4Q96JN8 1562 aa27.35■■□□□ 1.97
RFC4-203ENST00000411792 UBR1Q8IWV7 1749 aa27.35■■□□□ 1.97
RFC4-203ENST00000411792 PIK3C2BO00750 1634 aa27.34■■□□□ 1.97
RFC4-203ENST00000411792 NPHP4O75161 1426 aaPredicted RBP27.33■■□□□ 1.97
RFC4-203ENST00000411792 EID1Q9Y6B2 187 aa27.32■■□□□ 1.96
RFC4-203ENST00000411792 E9PCH4 1651 aa27.32■■□□□ 1.96
RFC4-203ENST00000411792 ADGRB3O60242 1522 aa27.28■■□□□ 1.96
RFC4-203ENST00000411792 SCAF11Q99590 1463 aaKnown RBP27.28■■□□□ 1.96
RFC4-203ENST00000411792 TXNDC2Q86VQ3 553 aa27.28■■□□□ 1.96
RFC4-203ENST00000411792 SLIT1O75093 1534 aa27.27■■□□□ 1.96
RFC4-203ENST00000411792 TMEM2Q9UHN6 1383 aa27.27■■□□□ 1.96
RFC4-203ENST00000411792 KDM5AP29375 1690 aaKnown RBP27.27■■□□□ 1.96
RFC4-203ENST00000411792 MED14O60244 1454 aa27.26■■□□□ 1.95
RFC4-203ENST00000411792 CHGAP10645 457 aaKnown RBP27.26■■□□□ 1.95
RFC4-203ENST00000411792 IQGAP1P46940 1657 aa27.26■■□□□ 1.95
RFC4-203ENST00000411792 ARHGAP23Q9P227 1491 aa27.25■■□□□ 1.95
RFC4-203ENST00000411792 SLC4A1APQ9BWU0 796 aaKnown RBP27.24■■□□□ 1.95
RFC4-203ENST00000411792 LTKP29376 864 aa27.23■■□□□ 1.95
RFC4-203ENST00000411792 IQSEC2Q5JU85 1478 aa27.23■■□□□ 1.95
RFC4-203ENST00000411792 ACIN1Q9UKV3 1341 aaKnown RBP27.22■■□□□ 1.95
RFC4-203ENST00000411792 HDGFP51858 240 aaKnown RBP27.2■■□□□ 1.94
RFC4-203ENST00000411792 SETD5Q9C0A6 1442 aa27.2■■□□□ 1.94
RFC4-203ENST00000411792 UBAP1LF5GYI3 381 aa27.17■■□□□ 1.94
RFC4-203ENST00000411792 CPS1P31327 1500 aa27.16■■□□□ 1.94
RFC4-203ENST00000411792 SPHKAPQ2M3C7 1700 aa27.16■■□□□ 1.94
RFC4-203ENST00000411792 PPP1R15AO75807 674 aaPredicted RBP27.15■■□□□ 1.94
RFC4-203ENST00000411792 BCANQ96GW7 911 aa27.14■■□□□ 1.94
RFC4-203ENST00000411792 TMEM131LA2VDJ0 1609 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms