RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 ERBINQ96RT1 1412 aa35.98■■■■□ 3.35
R3HCC1-202ENST00000411463 RRBP1Q9P2E9 1410 aaKnown RBP35.98■■■■□ 3.35
R3HCC1-202ENST00000411463 EIF2AK4Q9P2K8 1649 aaKnown RBP35.97■■■■□ 3.35
R3HCC1-202ENST00000411463 ITGAEP38570 1179 aa35.95■■■■□ 3.35
R3HCC1-202ENST00000411463 WASHC2CQ9Y4E1 1318 aa35.95■■■■□ 3.35
R3HCC1-202ENST00000411463 C3P01024 1663 aa35.95■■■■□ 3.34
R3HCC1-202ENST00000411463 CLTCQ00610 1675 aaKnown RBP35.95■■■■□ 3.34
R3HCC1-202ENST00000411463 MROH2AA6NES4 1674 aa35.94■■■■□ 3.34
R3HCC1-202ENST00000411463 RNF17Q9BXT8 1623 aaKnown RBP35.91■■■■□ 3.34
R3HCC1-202ENST00000411463 FAM135AQ9P2D6 1515 aa35.91■■■■□ 3.34
R3HCC1-202ENST00000411463 KDM5DQ9BY66 1539 aa35.9■■■■□ 3.34
R3HCC1-202ENST00000411463 LMTK3Q96Q04 1460 aa35.88■■■■□ 3.33
R3HCC1-202ENST00000411463 ROCK1Q13464 1354 aa35.87■■■■□ 3.33
R3HCC1-202ENST00000411463 NPATQ14207 1427 aa35.83■■■■□ 3.33
R3HCC1-202ENST00000411463 ANKRD50Q9ULJ7 1429 aa35.82■■■■□ 3.33
R3HCC1-202ENST00000411463 MROH1Q8NDA8 1641 aa35.82■■■■□ 3.33
R3HCC1-202ENST00000411463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.8■■■■□ 3.32
R3HCC1-202ENST00000411463 UHRF1BP1Q6BDS2 1440 aa35.79■■■■□ 3.32
R3HCC1-202ENST00000411463 ABCC3O15438 1527 aa35.78■■■■□ 3.32
R3HCC1-202ENST00000411463 PREX1Q8TCU6 1659 aa35.77■■■■□ 3.32
R3HCC1-202ENST00000411463 PRDM15P57071 1507 aaPredicted RBP35.77■■■■□ 3.32
R3HCC1-202ENST00000411463 HSPA2P54652 639 aa35.75■■■■□ 3.31
R3HCC1-202ENST00000411463 SETD1BQ9UPS6 1966 aaKnown RBP35.75■■■■□ 3.31
R3HCC1-202ENST00000411463 KANK1Q14678 1352 aa35.74■■■■□ 3.31
R3HCC1-202ENST00000411463 PZPP20742 1482 aa35.74■■■■□ 3.31
R3HCC1-202ENST00000411463 DEPDC5O75140 1603 aa35.74■■■■□ 3.31
R3HCC1-202ENST00000411463 ZC3H13Q5T200 1668 aaKnown RBP35.74■■■■□ 3.31
R3HCC1-202ENST00000411463 FBXO31Q5XUX0 539 aaPredicted RBP35.73■■■■□ 3.31
R3HCC1-202ENST00000411463 CEP152O94986 1710 aa35.64■■■■□ 3.3
R3HCC1-202ENST00000411463 TNRQ92752 1358 aa35.63■■■■□ 3.29
R3HCC1-202ENST00000411463 VWDEQ8N2E2 1590 aa35.62■■■■□ 3.29
R3HCC1-202ENST00000411463 CAMSAP1Q5T5Y3 1602 aa35.61■■■■□ 3.29
R3HCC1-202ENST00000411463 ARHGAP31Q2M1Z3 1444 aa35.6■■■■□ 3.29
R3HCC1-202ENST00000411463 LMTK2Q8IWU2 1503 aa35.59■■■■□ 3.29
R3HCC1-202ENST00000411463 MYO3AQ8NEV4 1616 aa35.57■■■■□ 3.29
R3HCC1-202ENST00000411463 NAIPQ13075 1403 aa35.54■■■■□ 3.28
R3HCC1-202ENST00000411463 ERVK-7P63135 1459 aa35.54■■■■□ 3.28
R3HCC1-202ENST00000411463 UNC13BO14795 1591 aa35.53■■■■□ 3.28
R3HCC1-202ENST00000411463 SPATA31D1Q6ZQQ2 1576 aa35.53■■■■□ 3.28
R3HCC1-202ENST00000411463 CEP170BQ9Y4F5 1589 aaPredicted RBP35.51■■■■□ 3.28
R3HCC1-202ENST00000411463 HFM1A2PYH4 1435 aa35.5■■■■□ 3.27
R3HCC1-202ENST00000411463 A2ML1A8K2U0 1454 aa35.5■■■■□ 3.27
R3HCC1-202ENST00000411463 ZNF142P52746 1687 aaPredicted RBP35.48■■■■□ 3.27
R3HCC1-202ENST00000411463 NLRP1Q9C000 1473 aa35.48■■■■□ 3.27
R3HCC1-202ENST00000411463 NUP155O75694 1391 aa35.48■■■■□ 3.27
R3HCC1-202ENST00000411463 EFCAB6Q5THR3 1501 aa35.46■■■■□ 3.27
R3HCC1-202ENST00000411463 GCC2Q8IWJ2 1684 aa35.43■■■■□ 3.26
R3HCC1-202ENST00000411463 IQGAP3Q86VI3 1631 aa35.39■■■■□ 3.26
R3HCC1-202ENST00000411463 RPRD2Q5VT52 1461 aaKnown RBP35.39■■■■□ 3.26
R3HCC1-202ENST00000411463 TET3O43151 1660 aa35.39■■■■□ 3.26
R3HCC1-202ENST00000411463 DMRT2Q9Y5R5 561 aa35.38■■■■□ 3.25
R3HCC1-202ENST00000411463 CFAP65Q6ZU64 1925 aaKnown RBP35.37■■■■□ 3.25
R3HCC1-202ENST00000411463 THEMISQ8N1K5 641 aaPredicted RBP35.36■■■■□ 3.25
R3HCC1-202ENST00000411463 PLA2R1Q13018 1463 aa35.36■■■■□ 3.25
R3HCC1-202ENST00000411463 UGGT1Q9NYU2 1555 aa35.35■■■■□ 3.25
R3HCC1-202ENST00000411463 STRCQ7RTU9 1775 aa35.35■■■■□ 3.25
R3HCC1-202ENST00000411463 NOS1P29475 1434 aa35.35■■■■□ 3.25
R3HCC1-202ENST00000411463 NCKAP5LQ9HCH0 1330 aa35.31■■■■□ 3.24
R3HCC1-202ENST00000411463 PKD2Q13563 968 aa35.3■■■■□ 3.24
R3HCC1-202ENST00000411463 TRIM52Q96A61 297 aa35.29■■■■□ 3.24
R3HCC1-202ENST00000411463 IDI1Q13907 227 aa35.28■■■■□ 3.24
R3HCC1-202ENST00000411463 SYNMO15061 1565 aa35.27■■■■□ 3.24
R3HCC1-202ENST00000411463 SLC52A1Q9NWF4 448 aa35.26■■■■□ 3.23
R3HCC1-202ENST00000411463 PTPRTO14522 1441 aa35.25■■■■□ 3.23
R3HCC1-202ENST00000411463 E9PCH4 1651 aa35.25■■■■□ 3.23
R3HCC1-202ENST00000411463 ANKLE2Q86XL3 938 aa35.22■■■■□ 3.23
R3HCC1-202ENST00000411463 STAG3Q9UJ98 1225 aa35.22■■■■□ 3.23
R3HCC1-202ENST00000411463 SETD5Q9C0A6 1442 aa35.19■■■■□ 3.22
R3HCC1-202ENST00000411463 PIK3C2BO00750 1634 aa35.19■■■■□ 3.22
R3HCC1-202ENST00000411463 UBR1Q8IWV7 1749 aa35.18■■■■□ 3.22
R3HCC1-202ENST00000411463 SLC4A1APQ9BWU0 796 aaKnown RBP35.15■■■■□ 3.22
R3HCC1-202ENST00000411463 ACIN1Q9UKV3 1341 aaKnown RBP35.12■■■■□ 3.21
R3HCC1-202ENST00000411463 KDM5AP29375 1690 aaKnown RBP35.09■■■■□ 3.21
R3HCC1-202ENST00000411463 ARHGAP23Q9P227 1491 aa35.09■■■■□ 3.21
R3HCC1-202ENST00000411463 SLIT1O75093 1534 aa35.09■■■■□ 3.21
R3HCC1-202ENST00000411463 TMEM2Q9UHN6 1383 aa35.08■■■■□ 3.21
R3HCC1-202ENST00000411463 ADGRB3O60242 1522 aa35.08■■■■□ 3.21
R3HCC1-202ENST00000411463 NEURL4Q96JN8 1562 aa35.08■■■■□ 3.21
R3HCC1-202ENST00000411463 POLR1AO95602 1720 aaPredicted RBP35.07■■■■□ 3.2
R3HCC1-202ENST00000411463 TXNDC2Q86VQ3 553 aa35.07■■■■□ 3.2
R3HCC1-202ENST00000411463 RAB3GAP2Q9H2M9 1393 aa35.07■■■■□ 3.2
R3HCC1-202ENST00000411463 EID1Q9Y6B2 187 aa35.06■■■■□ 3.2
R3HCC1-202ENST00000411463 MED14O60244 1454 aa35.05■■■■□ 3.2
R3HCC1-202ENST00000411463 LTKP29376 864 aa35.04■■■■□ 3.2
R3HCC1-202ENST00000411463 SCAF11Q99590 1463 aaKnown RBP35.04■■■■□ 3.2
R3HCC1-202ENST00000411463 NPHP4O75161 1426 aaPredicted RBP35.04■■■■□ 3.2
R3HCC1-202ENST00000411463 CHGAP10645 457 aaKnown RBP35.03■■■■□ 3.2
R3HCC1-202ENST00000411463 MPHOSPH9Q99550 1183 aa35.02■■■■□ 3.2
R3HCC1-202ENST00000411463 SPHKAPQ2M3C7 1700 aa35.01■■■■□ 3.19
R3HCC1-202ENST00000411463 TMEM131LA2VDJ0 1609 aa34.98■■■■□ 3.19
R3HCC1-202ENST00000411463 TRPM2O94759 1503 aa34.96■■■■□ 3.19
R3HCC1-202ENST00000411463 FOXD1Q16676 465 aa34.95■■■■□ 3.19
R3HCC1-202ENST00000411463 ZNF335Q9H4Z2 1342 aaPredicted RBP34.94■■■■□ 3.18
R3HCC1-202ENST00000411463 HRCP23327 699 aa34.93■■■■□ 3.18
R3HCC1-202ENST00000411463 IQGAP1P46940 1657 aa34.93■■■■□ 3.18
R3HCC1-202ENST00000411463 HDGFP51858 240 aaKnown RBP34.92■■■■□ 3.18
R3HCC1-202ENST00000411463 CERKQ8TCT0 537 aa34.92■■■■□ 3.18
R3HCC1-202ENST00000411463 ZFYVE9O95405 1425 aa34.9■■■■□ 3.18
R3HCC1-202ENST00000411463 RIMS2Q9UQ26 1411 aa34.9■■■■□ 3.18
R3HCC1-202ENST00000411463 LTBP4Q8N2S1 1624 aa34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms