RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 DUOX2Q9NRD8 1548 aa39.06■■■■□ 3.84
C2orf88-204ENST00000409870 MROH2AA6NES4 1674 aa39.05■■■■□ 3.84
C2orf88-204ENST00000409870 ITGAEP38570 1179 aa39.03■■■■□ 3.84
C2orf88-204ENST00000409870 ROCK1Q13464 1354 aa39.02■■■■□ 3.84
C2orf88-204ENST00000409870 UHRF1BP1Q6BDS2 1440 aa39.02■■■■□ 3.84
C2orf88-204ENST00000409870 SETD1BQ9UPS6 1966 aaKnown RBP39.02■■■■□ 3.84
C2orf88-204ENST00000409870 EIF2AK4Q9P2K8 1649 aaKnown RBP39■■■■□ 3.83
C2orf88-204ENST00000409870 RRP7BPQ9NSQ0 103 aa38.99■■■■□ 3.83
C2orf88-204ENST00000409870 ERBINQ96RT1 1412 aa38.96■■■■□ 3.83
C2orf88-204ENST00000409870 CLTCQ00610 1675 aaKnown RBP38.94■■■■□ 3.82
C2orf88-204ENST00000409870 RNF17Q9BXT8 1623 aaKnown RBP38.89■■■■□ 3.82
C2orf88-204ENST00000409870 KIF3BO15066 747 aa38.88■■■■□ 3.81
C2orf88-204ENST00000409870 STRCQ7RTU9 1775 aa38.84■■■■□ 3.81
C2orf88-204ENST00000409870 NPATQ14207 1427 aa38.84■■■■□ 3.81
C2orf88-204ENST00000409870 ANKRD50Q9ULJ7 1429 aa38.84■■■■□ 3.81
C2orf88-204ENST00000409870 ZMYM3Q14202 1370 aa38.82■■■■□ 3.8
C2orf88-204ENST00000409870 MROH1Q8NDA8 1641 aa38.81■■■■□ 3.8
C2orf88-204ENST00000409870 GCC2Q8IWJ2 1684 aa38.81■■■■□ 3.8
C2orf88-204ENST00000409870 GGT6Q6P531 493 aa38.8■■■■□ 3.8
C2orf88-204ENST00000409870 DEPDC5O75140 1603 aa38.8■■■■□ 3.8
C2orf88-204ENST00000409870 FAM135AQ9P2D6 1515 aa38.77■■■■□ 3.8
C2orf88-204ENST00000409870 PRDM15P57071 1507 aaPredicted RBP38.76■■■■□ 3.79
C2orf88-204ENST00000409870 HFM1A2PYH4 1435 aa38.75■■■■□ 3.79
C2orf88-204ENST00000409870 NAIPQ13075 1403 aa38.75■■■■□ 3.79
C2orf88-204ENST00000409870 PPP6R1Q9UPN7 881 aa38.74■■■■□ 3.79
C2orf88-204ENST00000409870 MYO3AQ8NEV4 1616 aa38.74■■■■□ 3.79
C2orf88-204ENST00000409870 FBXO41Q8TF61 875 aa38.73■■■■□ 3.79
C2orf88-204ENST00000409870 KDM5DQ9BY66 1539 aa38.71■■■■□ 3.79
C2orf88-204ENST00000409870 ZNF142P52746 1687 aaPredicted RBP38.71■■■■□ 3.79
C2orf88-204ENST00000409870 ZC3H13Q5T200 1668 aaKnown RBP38.68■■■■□ 3.78
C2orf88-204ENST00000409870 UNC13BO14795 1591 aa38.66■■■■□ 3.78
C2orf88-204ENST00000409870 DMRT2Q9Y5R5 561 aa38.64■■■■□ 3.78
C2orf88-204ENST00000409870 ABCC3O15438 1527 aa38.64■■■■□ 3.78
C2orf88-204ENST00000409870 VWDEQ8N2E2 1590 aa38.63■■■■□ 3.77
C2orf88-204ENST00000409870 CEP170BQ9Y4F5 1589 aaPredicted RBP38.62■■■■□ 3.77
C2orf88-204ENST00000409870 CAMSAP1Q5T5Y3 1602 aa38.62■■■■□ 3.77
C2orf88-204ENST00000409870 CEP152O94986 1710 aa38.61■■■■□ 3.77
C2orf88-204ENST00000409870 WASHC2CQ9Y4E1 1318 aa38.59■■■■□ 3.77
C2orf88-204ENST00000409870 PTPRTO14522 1441 aa38.59■■■■□ 3.77
C2orf88-204ENST00000409870 KANK1Q14678 1352 aa38.57■■■■□ 3.77
C2orf88-204ENST00000409870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.55■■■■□ 3.76
C2orf88-204ENST00000409870 LMTK2Q8IWU2 1503 aa38.53■■■■□ 3.76
C2orf88-204ENST00000409870 PZPP20742 1482 aa38.52■■■■□ 3.76
C2orf88-204ENST00000409870 CERKQ8TCT0 537 aa38.52■■■■□ 3.76
C2orf88-204ENST00000409870 PLA2R1Q13018 1463 aa38.49■■■■□ 3.75
C2orf88-204ENST00000409870 IQGAP3Q86VI3 1631 aa38.49■■■■□ 3.75
C2orf88-204ENST00000409870 SETD5Q9C0A6 1442 aa38.47■■■■□ 3.75
C2orf88-204ENST00000409870 A2ML1A8K2U0 1454 aa38.45■■■■□ 3.75
C2orf88-204ENST00000409870 EFCAB6Q5THR3 1501 aa38.43■■■■□ 3.74
C2orf88-204ENST00000409870 TET3O43151 1660 aa38.43■■■■□ 3.74
C2orf88-204ENST00000409870 NUP155O75694 1391 aa38.42■■■■□ 3.74
C2orf88-204ENST00000409870 TNRQ92752 1358 aa38.41■■■■□ 3.74
C2orf88-204ENST00000409870 TRIM26Q12899 539 aaPredicted RBP38.41■■■■□ 3.74
C2orf88-204ENST00000409870 ARHGAP31Q2M1Z3 1444 aa38.41■■■■□ 3.74
C2orf88-204ENST00000409870 FBXO31Q5XUX0 539 aaPredicted RBP38.36■■■■□ 3.73
C2orf88-204ENST00000409870 RAB3GAP2Q9H2M9 1393 aa38.35■■■■□ 3.73
C2orf88-204ENST00000409870 LTBP4Q8N2S1 1624 aa38.34■■■■□ 3.73
C2orf88-204ENST00000409870 NCKAP5LQ9HCH0 1330 aa38.34■■■■□ 3.73
C2orf88-204ENST00000409870 POLR1AO95602 1720 aaPredicted RBP38.32■■■■□ 3.72
C2orf88-204ENST00000409870 SPATA31D1Q6ZQQ2 1576 aa38.32■■■■□ 3.72
C2orf88-204ENST00000409870 PKD2Q13563 968 aa38.31■■■■□ 3.72
C2orf88-204ENST00000409870 ERVK-7P63135 1459 aa38.3■■■■□ 3.72
C2orf88-204ENST00000409870 RPRD2Q5VT52 1461 aaKnown RBP38.29■■■■□ 3.72
C2orf88-204ENST00000409870 NLRP1Q9C000 1473 aa38.29■■■■□ 3.72
C2orf88-204ENST00000409870 E9PCH4 1651 aa38.28■■■■□ 3.72
C2orf88-204ENST00000409870 ACIN1Q9UKV3 1341 aaKnown RBP38.27■■■■□ 3.72
C2orf88-204ENST00000409870 TRIM52Q96A61 297 aa38.27■■■■□ 3.72
C2orf88-204ENST00000409870 CFAP65Q6ZU64 1925 aaKnown RBP38.27■■■■□ 3.72
C2orf88-204ENST00000409870 UGGT1Q9NYU2 1555 aa38.21■■■■□ 3.71
C2orf88-204ENST00000409870 NEURL4Q96JN8 1562 aa38.21■■■■□ 3.71
C2orf88-204ENST00000409870 IQSEC2Q5JU85 1478 aa38.21■■■■□ 3.71
C2orf88-204ENST00000409870 HRCP23327 699 aa38.19■■■■□ 3.7
C2orf88-204ENST00000409870 NOS1P29475 1434 aa38.18■■■■□ 3.7
C2orf88-204ENST00000409870 SYNMO15061 1565 aa38.15■■■■□ 3.7
C2orf88-204ENST00000409870 ZNF335Q9H4Z2 1342 aaPredicted RBP38.13■■■■□ 3.69
C2orf88-204ENST00000409870 SLC4A1APQ9BWU0 796 aaKnown RBP38.12■■■■□ 3.69
C2orf88-204ENST00000409870 SPHKAPQ2M3C7 1700 aa38.09■■■■□ 3.69
C2orf88-204ENST00000409870 THEMISQ8N1K5 641 aaPredicted RBP38.08■■■■□ 3.69
C2orf88-204ENST00000409870 MPHOSPH9Q99550 1183 aa38.06■■■■□ 3.68
C2orf88-204ENST00000409870 UBR1Q8IWV7 1749 aa38.05■■■■□ 3.68
C2orf88-204ENST00000409870 PIK3C2BO00750 1634 aa38.02■■■■□ 3.68
C2orf88-204ENST00000409870 ANKLE2Q86XL3 938 aa38.02■■■■□ 3.68
C2orf88-204ENST00000409870 MED14O60244 1454 aa38.01■■■■□ 3.67
C2orf88-204ENST00000409870 IQGAP1P46940 1657 aa38■■■■□ 3.67
C2orf88-204ENST00000409870 TRPM2O94759 1503 aa37.99■■■■□ 3.67
C2orf88-204ENST00000409870 NPHP4O75161 1426 aaPredicted RBP37.97■■■■□ 3.67
C2orf88-204ENST00000409870 SLC52A1Q9NWF4 448 aa37.95■■■■□ 3.67
C2orf88-204ENST00000409870 KDM5AP29375 1690 aaKnown RBP37.94■■■■□ 3.66
C2orf88-204ENST00000409870 CPS1P31327 1500 aa37.93■■■■□ 3.66
C2orf88-204ENST00000409870 IDI1Q13907 227 aa37.92■■■■□ 3.66
C2orf88-204ENST00000409870 ADGRB3O60242 1522 aa37.9■■■■□ 3.66
C2orf88-204ENST00000409870 FOXD1Q16676 465 aa37.9■■■■□ 3.66
C2orf88-204ENST00000409870 PCGF6Q9BYE7 350 aa37.89■■■■□ 3.66
C2orf88-204ENST00000409870 CLTCL1P53675 1640 aa37.88■■■■□ 3.65
C2orf88-204ENST00000409870 SLIT1O75093 1534 aa37.87■■■■□ 3.65
C2orf88-204ENST00000409870 SCAF11Q99590 1463 aaKnown RBP37.85■■■■□ 3.65
C2orf88-204ENST00000409870 ARHGAP23Q9P227 1491 aa37.85■■■■□ 3.65
C2orf88-204ENST00000409870 TMEM131LA2VDJ0 1609 aa37.83■■■■□ 3.65
C2orf88-204ENST00000409870 MYO5BQ9ULV0 1848 aa37.8■■■■□ 3.64
C2orf88-204ENST00000409870 UBAP1LF5GYI3 381 aa37.78■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms