RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 PRDM15P57071 1507 aaPredicted RBP8.06□□□□□ -1.12
EPHA4-202ENST00000409854 ANKRD30BQ9BXX2 1392 aa8.05□□□□□ -1.12
EPHA4-202ENST00000409854 AFAP1Q8N556 730 aa8.05□□□□□ -1.12
EPHA4-202ENST00000409854 PHF23Q9BUL5 403 aaPredicted RBP8.05□□□□□ -1.12
EPHA4-202ENST00000409854 TEX14Q8IWB6 1497 aa8.05□□□□□ -1.12
EPHA4-202ENST00000409854 DIP2CQ9Y2E4 1556 aa8.05□□□□□ -1.12
EPHA4-202ENST00000409854 TET3O43151 1660 aa8.04□□□□□ -1.12
EPHA4-202ENST00000409854 RPRD2Q5VT52 1461 aaKnown RBP8.04□□□□□ -1.12
EPHA4-202ENST00000409854 SIN3AQ96ST3 1273 aa8.04□□□□□ -1.12
EPHA4-202ENST00000409854 E9PCH4 1651 aa8.04□□□□□ -1.12
EPHA4-202ENST00000409854 NUP155O75694 1391 aa8.03□□□□□ -1.12
EPHA4-202ENST00000409854 SLC4A1APQ9BWU0 796 aaKnown RBP8.02□□□□□ -1.12
EPHA4-202ENST00000409854 DHX29Q7Z478 1369 aaKnown RBP8.02□□□□□ -1.13
EPHA4-202ENST00000409854 A2MP01023 1474 aa8.02□□□□□ -1.13
EPHA4-202ENST00000409854 REREQ9P2R6 1566 aa8.02□□□□□ -1.13
EPHA4-202ENST00000409854 SPHKAPQ2M3C7 1700 aa8.02□□□□□ -1.13
EPHA4-202ENST00000409854 CEP152O94986 1710 aa8.01□□□□□ -1.13
EPHA4-202ENST00000409854 FAM69CQ0P6D2 419 aa8.01□□□□□ -1.13
EPHA4-202ENST00000409854 ATP10AO60312 1499 aa8.01□□□□□ -1.13
EPHA4-202ENST00000409854 LMTK2Q8IWU2 1503 aa8.01□□□□□ -1.13
EPHA4-202ENST00000409854 TONSLQ96HA7 1378 aa8□□□□□ -1.13
EPHA4-202ENST00000409854 ZC3H13Q5T200 1668 aaKnown RBP8□□□□□ -1.13
EPHA4-202ENST00000409854 NEUROD1Q13562 356 aa7.99□□□□□ -1.13
EPHA4-202ENST00000409854 PKD2Q13563 968 aa7.99□□□□□ -1.13
EPHA4-202ENST00000409854 FOXD1Q16676 465 aa7.99□□□□□ -1.13
EPHA4-202ENST00000409854 EFCAB6Q5THR3 1501 aa7.99□□□□□ -1.13
EPHA4-202ENST00000409854 PPP1R15AO75807 674 aaPredicted RBP7.98□□□□□ -1.13
EPHA4-202ENST00000409854 PLA2R1Q13018 1463 aa7.98□□□□□ -1.13
EPHA4-202ENST00000409854 TRPM2O94759 1503 aa7.98□□□□□ -1.13
EPHA4-202ENST00000409854 SLC24A1O60721 1099 aa7.98□□□□□ -1.13
EPHA4-202ENST00000409854 ARHGEF40Q8TER5 1519 aa7.98□□□□□ -1.13
EPHA4-202ENST00000409854 CAMSAP1Q5T5Y3 1602 aa7.97□□□□□ -1.13
EPHA4-202ENST00000409854 SIGLEC1Q9BZZ2 1709 aa7.97□□□□□ -1.13
EPHA4-202ENST00000409854 NEURL4Q96JN8 1562 aa7.97□□□□□ -1.13
EPHA4-202ENST00000409854 YEATS2Q9ULM3 1422 aa7.96□□□□□ -1.13
EPHA4-202ENST00000409854 RAPGEF3O95398 923 aa7.96□□□□□ -1.13
EPHA4-202ENST00000409854 AGLP35573 1532 aa7.96□□□□□ -1.14
EPHA4-202ENST00000409854 ZNF316A6NFI3 1004 aaPredicted RBP7.96□□□□□ -1.14
EPHA4-202ENST00000409854 PTPRTO14522 1441 aa7.96□□□□□ -1.14
EPHA4-202ENST00000409854 CLTCL1P53675 1640 aa7.95□□□□□ -1.14
EPHA4-202ENST00000409854 ABCC3O15438 1527 aa7.95□□□□□ -1.14
EPHA4-202ENST00000409854 COL17A1Q9UMD9 1497 aaPredicted RBP7.95□□□□□ -1.14
EPHA4-202ENST00000409854 KANK1Q14678 1352 aa7.95□□□□□ -1.14
EPHA4-202ENST00000409854 KIF1BO60333 1816 aa7.94□□□□□ -1.14
EPHA4-202ENST00000409854 IFT172Q9UG01 1749 aa7.94□□□□□ -1.14
EPHA4-202ENST00000409854 KIF3BO15066 747 aa7.94□□□□□ -1.14
EPHA4-202ENST00000409854 POLR1AO95602 1720 aaPredicted RBP7.94□□□□□ -1.14
EPHA4-202ENST00000409854 CCDC144AA2RUR9 1427 aa7.93□□□□□ -1.14
EPHA4-202ENST00000409854 UHRF1BP1Q6BDS2 1440 aa7.93□□□□□ -1.14
EPHA4-202ENST00000409854 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.93□□□□□ -1.14
EPHA4-202ENST00000409854 L3MBTL2Q969R5 705 aa7.93□□□□□ -1.14
EPHA4-202ENST00000409854 MYT1LQ9UL68 1186 aa7.93□□□□□ -1.14
EPHA4-202ENST00000409854 PIK3C2BO00750 1634 aa7.92□□□□□ -1.14
EPHA4-202ENST00000409854 ERICH6Q7L0X2 663 aa7.92□□□□□ -1.14
EPHA4-202ENST00000409854 TRPM1Q7Z4N2 1603 aa7.92□□□□□ -1.14
EPHA4-202ENST00000409854 MROH2AA6NES4 1674 aa7.92□□□□□ -1.14
EPHA4-202ENST00000409854 DNAJC5Q9H3Z4 198 aa7.91□□□□□ -1.14
EPHA4-202ENST00000409854 SPATA31E1Q6ZUB1 1445 aa7.91□□□□□ -1.14
EPHA4-202ENST00000409854 LAMC1P11047 1609 aa7.91□□□□□ -1.14
EPHA4-202ENST00000409854 PREX1Q8TCU6 1659 aa7.91□□□□□ -1.14
EPHA4-202ENST00000409854 ARHGAP31Q2M1Z3 1444 aa7.91□□□□□ -1.14
EPHA4-202ENST00000409854 RALGAPBQ86X10 1494 aa7.9□□□□□ -1.14
EPHA4-202ENST00000409854 NPATQ14207 1427 aa7.9□□□□□ -1.15
EPHA4-202ENST00000409854 CFAP65Q6ZU64 1925 aaKnown RBP7.9□□□□□ -1.15
EPHA4-202ENST00000409854 CLTCQ00610 1675 aaKnown RBP7.9□□□□□ -1.15
EPHA4-202ENST00000409854 SYNMO15061 1565 aa7.89□□□□□ -1.15
EPHA4-202ENST00000409854 MADDQ8WXG6 1647 aa7.89□□□□□ -1.15
EPHA4-202ENST00000409854 ADGRB3O60242 1522 aa7.89□□□□□ -1.15
EPHA4-202ENST00000409854 KIAA1210Q9ULL0 1709 aa7.89□□□□□ -1.15
EPHA4-202ENST00000409854 PPLO60437 1756 aa7.89□□□□□ -1.15
EPHA4-202ENST00000409854 CNTLNQ9NXG0 1405 aa7.89□□□□□ -1.15
EPHA4-202ENST00000409854 UGGT1Q9NYU2 1555 aa7.88□□□□□ -1.15
EPHA4-202ENST00000409854 NOS1P29475 1434 aa7.88□□□□□ -1.15
EPHA4-202ENST00000409854 NBPF8Q3BBV2 869 aa7.88□□□□□ -1.15
EPHA4-202ENST00000409854 PRAG1Q86YV5 1406 aa7.87□□□□□ -1.15
EPHA4-202ENST00000409854 MYO5BQ9ULV0 1848 aa7.86□□□□□ -1.15
EPHA4-202ENST00000409854 MYOM2P54296 1465 aa7.86□□□□□ -1.15
EPHA4-202ENST00000409854 DIEXFQ68CQ4 756 aaKnown RBP7.86□□□□□ -1.15
EPHA4-202ENST00000409854 GGT6Q6P531 493 aa7.86□□□□□ -1.15
EPHA4-202ENST00000409854 PPP6R1Q9UPN7 881 aa7.86□□□□□ -1.15
EPHA4-202ENST00000409854 SPATA31D1Q6ZQQ2 1576 aa7.85□□□□□ -1.15
EPHA4-202ENST00000409854 WASHC2CQ9Y4E1 1318 aa7.85□□□□□ -1.15
EPHA4-202ENST00000409854 IQGAP1P46940 1657 aa7.85□□□□□ -1.15
EPHA4-202ENST00000409854 NRXN1Q9ULB1 1477 aa7.84□□□□□ -1.15
EPHA4-202ENST00000409854 TMEM131LA2VDJ0 1609 aa7.84□□□□□ -1.15
EPHA4-202ENST00000409854 GPRASP1Q5JY77 1395 aa7.84□□□□□ -1.15
EPHA4-202ENST00000409854 ERVK-7P63135 1459 aa7.83□□□□□ -1.16
EPHA4-202ENST00000409854 STAC3Q96MF2 364 aa7.83□□□□□ -1.16
EPHA4-202ENST00000409854 DCAF11Q8TEB1 546 aa7.83□□□□□ -1.16
EPHA4-202ENST00000409854 KDM5AP29375 1690 aaKnown RBP7.83□□□□□ -1.16
EPHA4-202ENST00000409854 FER1L4A9Z1Z3 1794 aa7.82□□□□□ -1.16
EPHA4-202ENST00000409854 NEXMIFQ5QGS0 1516 aa7.82□□□□□ -1.16
EPHA4-202ENST00000409854 HSPA5P11021 654 aaKnown RBP7.82□□□□□ -1.16
EPHA4-202ENST00000409854 EIF4G2P78344 907 aaKnown RBP eCLIP7.82□□□□□ -1.16
EPHA4-202ENST00000409854 SETBP1Q9Y6X0 1596 aa7.81□□□□□ -1.16
EPHA4-202ENST00000409854 USP47Q96K76 1375 aa7.8□□□□□ -1.16
EPHA4-202ENST00000409854 C3P01024 1663 aa7.8□□□□□ -1.16
EPHA4-202ENST00000409854 RGL3Q3MIN7 710 aa7.8□□□□□ -1.16
EPHA4-202ENST00000409854 TRHP20396 242 aaPredicted RBP7.8□□□□□ -1.16
EPHA4-202ENST00000409854 MYO3AQ8NEV4 1616 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms