RNA–Protein interactions for RNA: ENST00000409036.5

RAPGEF4-204, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 5 BASIC

Gene RAPGEF4, Length 3,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-204ENST00000409036 CCER2I3L3R5 266 aa8.77□□□□□ -1.01
RAPGEF4-204ENST00000409036 HNRNPUQ00839 825 aaKnown RBP eCLIP8.77□□□□□ -1.01
RAPGEF4-204ENST00000409036 ASXL2Q76L83 1435 aa8.76□□□□□ -1.01
RAPGEF4-204ENST00000409036 FANCAO15360 1455 aa8.76□□□□□ -1.01
RAPGEF4-204ENST00000409036 ATP7AQ04656 1500 aa8.76□□□□□ -1.01
RAPGEF4-204ENST00000409036 EIF4G2P78344 907 aaKnown RBP eCLIP8.76□□□□□ -1.01
RAPGEF4-204ENST00000409036 HNRNPMP52272 730 aaKnown RBP eCLIP8.76□□□□□ -1.01
RAPGEF4-204ENST00000409036 NEO1Q92859 1461 aa8.76□□□□□ -1.01
RAPGEF4-204ENST00000409036 VWDEQ8N2E2 1590 aa8.76□□□□□ -1.01
RAPGEF4-204ENST00000409036 ZNF326Q5BKZ1 582 aaKnown RBP8.75□□□□□ -1.01
RAPGEF4-204ENST00000409036 TET3O43151 1660 aa8.75□□□□□ -1.01
RAPGEF4-204ENST00000409036 GLI2P10070 1586 aa8.75□□□□□ -1.01
RAPGEF4-204ENST00000409036 ZNF518AQ6AHZ1 1483 aa8.75□□□□□ -1.01
RAPGEF4-204ENST00000409036 NPM1P06748 294 aaKnown RBP eCLIP8.75□□□□□ -1.01
RAPGEF4-204ENST00000409036 PKD2Q13563 968 aa8.74□□□□□ -1.01
RAPGEF4-204ENST00000409036 KDM5CP41229 1560 aa8.74□□□□□ -1.01
RAPGEF4-204ENST00000409036 PRDM15P57071 1507 aaPredicted RBP8.74□□□□□ -1.01
RAPGEF4-204ENST00000409036 L3MBTL2Q969R5 705 aa8.74□□□□□ -1.01
RAPGEF4-204ENST00000409036 LMTK2Q8IWU2 1503 aa8.74□□□□□ -1.01
RAPGEF4-204ENST00000409036 ADGRL1O94910 1474 aa8.74□□□□□ -1.01
RAPGEF4-204ENST00000409036 AEBP2Q6ZN18 517 aaPredicted RBP8.73□□□□□ -1.01
RAPGEF4-204ENST00000409036 RNF17Q9BXT8 1623 aaKnown RBP8.73□□□□□ -1.01
RAPGEF4-204ENST00000409036 SENP3-EIF4A1A0A087X0R7 540 aa8.73□□□□□ -1.01
RAPGEF4-204ENST00000409036 KANK1Q14678 1352 aa8.73□□□□□ -1.01
RAPGEF4-204ENST00000409036 CCDC144AA2RUR9 1427 aa8.73□□□□□ -1.01
RAPGEF4-204ENST00000409036 SPATA31E1Q6ZUB1 1445 aa8.73□□□□□ -1.01
RAPGEF4-204ENST00000409036 ROCK2O75116 1388 aaKnown RBP8.73□□□□□ -1.01
RAPGEF4-204ENST00000409036 TRPM2O94759 1503 aa8.72□□□□□ -1.01
RAPGEF4-204ENST00000409036 SPAG9O60271 1321 aaKnown RBP8.72□□□□□ -1.01
RAPGEF4-204ENST00000409036 FAM9BQ8IZU0 186 aa8.72□□□□□ -1.01
RAPGEF4-204ENST00000409036 MLH3Q9UHC1 1453 aa8.72□□□□□ -1.01
RAPGEF4-204ENST00000409036 TRAPPC8Q9Y2L5 1435 aa8.72□□□□□ -1.01
RAPGEF4-204ENST00000409036 CNTLNQ9NXG0 1405 aa8.71□□□□□ -1.02
RAPGEF4-204ENST00000409036 PTPRTO14522 1441 aa8.7□□□□□ -1.02
RAPGEF4-204ENST00000409036 HECW2Q9P2P5 1572 aa8.7□□□□□ -1.02
RAPGEF4-204ENST00000409036 CEP152O94986 1710 aa8.7□□□□□ -1.02
RAPGEF4-204ENST00000409036 DHX29Q7Z478 1369 aaKnown RBP8.7□□□□□ -1.02
RAPGEF4-204ENST00000409036 ANP32EQ9BTT0 268 aa8.7□□□□□ -1.02
RAPGEF4-204ENST00000409036 SPHKAPQ2M3C7 1700 aa8.7□□□□□ -1.02
RAPGEF4-204ENST00000409036 POGZQ7Z3K3 1410 aa8.7□□□□□ -1.02
RAPGEF4-204ENST00000409036 TSHZ2Q9NRE2 1034 aa8.69□□□□□ -1.02
RAPGEF4-204ENST00000409036 GPRASP1Q5JY77 1395 aa8.69□□□□□ -1.02
RAPGEF4-204ENST00000409036 TRPM1Q7Z4N2 1603 aa8.69□□□□□ -1.02
RAPGEF4-204ENST00000409036 MAP3K4Q9Y6R4 1608 aa8.69□□□□□ -1.02
RAPGEF4-204ENST00000409036 SCAPERQ9BY12 1400 aa8.69□□□□□ -1.02
RAPGEF4-204ENST00000409036 HSPA5P11021 654 aaKnown RBP8.69□□□□□ -1.02
RAPGEF4-204ENST00000409036 KIAA1210Q9ULL0 1709 aa8.68□□□□□ -1.02
RAPGEF4-204ENST00000409036 ZC3H13Q5T200 1668 aaKnown RBP8.68□□□□□ -1.02
RAPGEF4-204ENST00000409036 CCDC7Q96M83 1385 aa8.68□□□□□ -1.02
RAPGEF4-204ENST00000409036 CD109Q6YHK3 1445 aa8.68□□□□□ -1.02
RAPGEF4-204ENST00000409036 E9PCH4 1651 aa8.67□□□□□ -1.02
RAPGEF4-204ENST00000409036 KIDINS220Q9ULH0 1771 aa8.67□□□□□ -1.02
RAPGEF4-204ENST00000409036 KTN1Q86UP2 1357 aaKnown RBP8.67□□□□□ -1.02
RAPGEF4-204ENST00000409036 PRAG1Q86YV5 1406 aa8.67□□□□□ -1.02
RAPGEF4-204ENST00000409036 MROH1Q8NDA8 1641 aa8.66□□□□□ -1.02
RAPGEF4-204ENST00000409036 EFCAB6Q5THR3 1501 aa8.66□□□□□ -1.02
RAPGEF4-204ENST00000409036 PLA2R1Q13018 1463 aa8.66□□□□□ -1.02
RAPGEF4-204ENST00000409036 SLC24A1O60721 1099 aa8.65□□□□□ -1.02
RAPGEF4-204ENST00000409036 ZMYM4Q5VZL5 1548 aa8.65□□□□□ -1.02
RAPGEF4-204ENST00000409036 A2MP01023 1474 aa8.65□□□□□ -1.02
RAPGEF4-204ENST00000409036 USP47Q96K76 1375 aa8.65□□□□□ -1.02
RAPGEF4-204ENST00000409036 REREQ9P2R6 1566 aa8.65□□□□□ -1.02
RAPGEF4-204ENST00000409036 MYOM2P54296 1465 aa8.65□□□□□ -1.03
RAPGEF4-204ENST00000409036 FOXD1Q16676 465 aa8.64□□□□□ -1.03
RAPGEF4-204ENST00000409036 NBPF8Q3BBV2 869 aa8.64□□□□□ -1.03
RAPGEF4-204ENST00000409036 SALL2Q9Y467 1007 aaPredicted RBP8.64□□□□□ -1.03
RAPGEF4-204ENST00000409036 WASHC2AQ641Q2 1341 aa8.63□□□□□ -1.03
RAPGEF4-204ENST00000409036 NBR1Q14596 966 aa8.63□□□□□ -1.03
RAPGEF4-204ENST00000409036 MADDQ8WXG6 1647 aa8.62□□□□□ -1.03
RAPGEF4-204ENST00000409036 RTL5Q5HYW3 569 aaPredicted RBP8.62□□□□□ -1.03
RAPGEF4-204ENST00000409036 RBM19Q9Y4C8 960 aaKnown RBP8.62□□□□□ -1.03
RAPGEF4-204ENST00000409036 RICTORQ6R327 1708 aa8.62□□□□□ -1.03
RAPGEF4-204ENST00000409036 RIMBP3CA6NJZ7 1639 aa8.62□□□□□ -1.03
RAPGEF4-204ENST00000409036 RIMBP3BA6NNM3 1639 aa8.62□□□□□ -1.03
RAPGEF4-204ENST00000409036 RIMBP3Q9UFD9 1639 aa8.62□□□□□ -1.03
RAPGEF4-204ENST00000409036 MRS2Q9HD23 443 aa8.62□□□□□ -1.03
RAPGEF4-204ENST00000409036 NPM2Q86SE8 214 aaKnown RBP8.61□□□□□ -1.03
RAPGEF4-204ENST00000409036 CLTCL1P53675 1640 aa8.61□□□□□ -1.03
RAPGEF4-204ENST00000409036 KIF1BO60333 1816 aa8.61□□□□□ -1.03
RAPGEF4-204ENST00000409036 ARHGAP31Q2M1Z3 1444 aa8.61□□□□□ -1.03
RAPGEF4-204ENST00000409036 ABCA6Q8N139 1617 aa8.6□□□□□ -1.03
RAPGEF4-204ENST00000409036 FRMPD1Q5SYB0 1578 aa8.6□□□□□ -1.03
RAPGEF4-204ENST00000409036 IFT172Q9UG01 1749 aa8.6□□□□□ -1.03
RAPGEF4-204ENST00000409036 DIP2CQ9Y2E4 1556 aa8.6□□□□□ -1.03
RAPGEF4-204ENST00000409036 IQGAP1P46940 1657 aa8.6□□□□□ -1.03
RAPGEF4-204ENST00000409036 DIP2BQ9P265 1576 aa8.6□□□□□ -1.03
RAPGEF4-204ENST00000409036 PPRC1Q5VV67 1664 aaKnown RBP8.59□□□□□ -1.03
RAPGEF4-204ENST00000409036 KIF7Q2M1P5 1343 aa8.59□□□□□ -1.03
RAPGEF4-204ENST00000409036 CARD11Q9BXL7 1154 aa8.59□□□□□ -1.03
RAPGEF4-204ENST00000409036 WASHC2CQ9Y4E1 1318 aa8.59□□□□□ -1.03
RAPGEF4-204ENST00000409036 SETBP1Q9Y6X0 1596 aa8.59□□□□□ -1.03
RAPGEF4-204ENST00000409036 ADGRB3O60242 1522 aa8.59□□□□□ -1.03
RAPGEF4-204ENST00000409036 EIF3AQ14152 1382 aaKnown RBP8.59□□□□□ -1.03
RAPGEF4-204ENST00000409036 PPP6R1Q9UPN7 881 aa8.59□□□□□ -1.03
RAPGEF4-204ENST00000409036 AGLP35573 1532 aa8.58□□□□□ -1.04
RAPGEF4-204ENST00000409036 NRXN1Q9ULB1 1477 aa8.58□□□□□ -1.04
RAPGEF4-204ENST00000409036 COL17A1Q9UMD9 1497 aaPredicted RBP8.58□□□□□ -1.04
RAPGEF4-204ENST00000409036 AFAP1Q8N556 730 aa8.58□□□□□ -1.04
RAPGEF4-204ENST00000409036 CAMSAP1Q5T5Y3 1602 aa8.58□□□□□ -1.04
RAPGEF4-204ENST00000409036 RPGRIP1LQ68CZ1 1315 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms