RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 PPP4R2Q9NY27 417 aa20.77■□□□□ 0.92
CBX6-202ENST00000407418 PLCB2Q00722 1185 aa20.76■□□□□ 0.91
CBX6-202ENST00000407418 TTC5Q8N0Z6 440 aa20.75■□□□□ 0.91
CBX6-202ENST00000407418 RAB3GAP2Q9H2M9 1393 aa20.73■□□□□ 0.91
CBX6-202ENST00000407418 NOP58Q9Y2X3 529 aaKnown RBP20.72■□□□□ 0.91
CBX6-202ENST00000407418 SLC4A10Q6U841 1118 aa20.71■□□□□ 0.91
CBX6-202ENST00000407418 RWDD1Q9H446 243 aaPredicted RBP20.7■□□□□ 0.9
CBX6-202ENST00000407418 KLHL34Q8N239 644 aa20.69■□□□□ 0.9
CBX6-202ENST00000407418 SMC4Q9NTJ3 1288 aa20.69■□□□□ 0.9
CBX6-202ENST00000407418 TRIM34Q9BYJ4 488 aa20.69■□□□□ 0.9
CBX6-202ENST00000407418 HTATSF1O43719 755 aaKnown RBP20.68■□□□□ 0.9
CBX6-202ENST00000407418 SYTL4Q96C24 671 aaPredicted RBP20.68■□□□□ 0.9
CBX6-202ENST00000407418 NOL10Q9BSC4 688 aaKnown RBP20.68■□□□□ 0.9
CBX6-202ENST00000407418 TEFQ10587 303 aa20.67■□□□□ 0.9
CBX6-202ENST00000407418 L1TD1Q5T7N2 865 aaKnown RBP20.67■□□□□ 0.9
CBX6-202ENST00000407418 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
CBX6-202ENST00000407418 CCER2I3L3R5 266 aa20.66■□□□□ 0.9
CBX6-202ENST00000407418 KIAA2012Q0VF49 1180 aa20.66■□□□□ 0.9
CBX6-202ENST00000407418 FGD5Q6ZNL6 1462 aa20.66■□□□□ 0.9
CBX6-202ENST00000407418 CGNL1Q0VF96 1302 aa20.66■□□□□ 0.9
CBX6-202ENST00000407418 MINK1Q8N4C8 1332 aaPredicted RBP20.66■□□□□ 0.9
CBX6-202ENST00000407418 HSP90B1P14625 803 aaKnown RBP20.66■□□□□ 0.9
CBX6-202ENST00000407418 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.65■□□□□ 0.9
CBX6-202ENST00000407418 CHAF1AQ13111 956 aaPredicted RBP20.64■□□□□ 0.9
CBX6-202ENST00000407418 AMOTL1Q8IY63 956 aa20.64■□□□□ 0.9
CBX6-202ENST00000407418 CTDP1Q9Y5B0 961 aaPredicted RBP20.64■□□□□ 0.89
CBX6-202ENST00000407418 CCDC34Q96HJ3 373 aa20.63■□□□□ 0.89
CBX6-202ENST00000407418 TOMM22Q9NS69 142 aa20.63■□□□□ 0.89
CBX6-202ENST00000407418 WASHC2AQ641Q2 1341 aa20.62■□□□□ 0.89
CBX6-202ENST00000407418 TRIM6-TRIM34B2RNG4 842 aa20.62■□□□□ 0.89
CBX6-202ENST00000407418 SF3B2Q13435 895 aaKnown RBP20.62■□□□□ 0.89
CBX6-202ENST00000407418 PMFBP1Q8TBY8 1022 aa20.62■□□□□ 0.89
CBX6-202ENST00000407418 VPS53Q5VIR6 699 aa20.62■□□□□ 0.89
CBX6-202ENST00000407418 PHLDB1Q86UU1 1377 aa20.61■□□□□ 0.89
CBX6-202ENST00000407418 NEXNQ0ZGT2 675 aa20.6■□□□□ 0.89
CBX6-202ENST00000407418 MARCH6O60337 910 aa20.59■□□□□ 0.89
CBX6-202ENST00000407418 L3MBTL2Q969R5 705 aa20.59■□□□□ 0.89
CBX6-202ENST00000407418 B4GALNT3Q6L9W6 998 aa20.58■□□□□ 0.89
CBX6-202ENST00000407418 RASSF8Q8NHQ8 419 aa20.57■□□□□ 0.88
CBX6-202ENST00000407418 CWC22Q9HCG8 908 aaKnown RBP20.57■□□□□ 0.88
CBX6-202ENST00000407418 CCDC146Q8IYE0 955 aa20.57■□□□□ 0.88
CBX6-202ENST00000407418 MRC2Q9UBG0 1479 aa20.57■□□□□ 0.88
CBX6-202ENST00000407418 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
CBX6-202ENST00000407418 DHX57Q6P158 1386 aaKnown RBP20.56■□□□□ 0.88
CBX6-202ENST00000407418 AQRO60306 1485 aaKnown RBP eCLIP20.56■□□□□ 0.882e-6■■■■□ 22.4
CBX6-202ENST00000407418 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
CBX6-202ENST00000407418 FBXW7Q969H0 707 aa20.56■□□□□ 0.88
CBX6-202ENST00000407418 RAPGEF4Q8WZA2 1011 aa20.55■□□□□ 0.88
CBX6-202ENST00000407418 LRRFIP1Q32MZ4 808 aaKnown RBP20.55■□□□□ 0.88
CBX6-202ENST00000407418 DRC7Q8IY82 874 aa20.55■□□□□ 0.88
CBX6-202ENST00000407418 RCAN3Q9UKA8 241 aa20.55■□□□□ 0.88
CBX6-202ENST00000407418 ARHGAP5Q13017 1502 aa20.54■□□□□ 0.88
CBX6-202ENST00000407418 KIF15Q9NS87 1388 aa20.53■□□□□ 0.88
CBX6-202ENST00000407418 DEKP35659 375 aaKnown RBP20.53■□□□□ 0.88
CBX6-202ENST00000407418 CENPJQ9HC77 1338 aaPredicted RBP20.53■□□□□ 0.88
CBX6-202ENST00000407418 GPRASP1Q5JY77 1395 aa20.53■□□□□ 0.88
CBX6-202ENST00000407418 MYOM3Q5VTT5 1437 aa20.52■□□□□ 0.88
CBX6-202ENST00000407418 NLRP13Q86W25 1043 aa20.52■□□□□ 0.88
CBX6-202ENST00000407418 VPS37DQ86XT2 251 aa20.52■□□□□ 0.88
CBX6-202ENST00000407418 NGEFQ8N5V2 710 aa20.52■□□□□ 0.88
CBX6-202ENST00000407418 DDX58O95786 925 aaKnown RBP20.52■□□□□ 0.87
CBX6-202ENST00000407418 PROSER2Q86WR7 435 aaPredicted RBP20.51■□□□□ 0.87
CBX6-202ENST00000407418 TCEAL9Q9UHQ7 104 aa20.51■□□□□ 0.87
CBX6-202ENST00000407418 POGZQ7Z3K3 1410 aa20.51■□□□□ 0.87
CBX6-202ENST00000407418 TPM4P67936 248 aa20.51■□□□□ 0.87
CBX6-202ENST00000407418 RBM33Q96EV2 1170 aaKnown RBP20.5■□□□□ 0.87
CBX6-202ENST00000407418 MIA2Q96PC5 1412 aa20.5■□□□□ 0.87
CBX6-202ENST00000407418 PTMSP20962 102 aa20.49■□□□□ 0.87
CBX6-202ENST00000407418 CUX1P39880 1505 aa20.49■□□□□ 0.87
CBX6-202ENST00000407418 SYNJ2O15056 1496 aa20.49■□□□□ 0.87
CBX6-202ENST00000407418 IFT140Q96RY7 1462 aa20.49■□□□□ 0.87
CBX6-202ENST00000407418 PRM3Q9NNZ6 103 aa20.48■□□□□ 0.87
CBX6-202ENST00000407418 NCAPD3P42695 1498 aa20.48■□□□□ 0.87
CBX6-202ENST00000407418 AMER1Q5JTC6 1135 aaPredicted RBP20.47■□□□□ 0.87
CBX6-202ENST00000407418 KIF3AQ9Y496 699 aa20.47■□□□□ 0.87
CBX6-202ENST00000407418 PRG4Q92954 1404 aaPredicted RBP20.47■□□□□ 0.87
CBX6-202ENST00000407418 PANK3Q9H999 370 aa20.47■□□□□ 0.87
CBX6-202ENST00000407418 EIF2S2P20042 333 aaKnown RBP20.47■□□□□ 0.87
CBX6-202ENST00000407418 CHMP4CQ96CF2 233 aa20.47■□□□□ 0.87
CBX6-202ENST00000407418 MSNP26038 577 aaKnown RBP20.46■□□□□ 0.87
CBX6-202ENST00000407418 NLRP2Q9NX02 1062 aa20.46■□□□□ 0.87
CBX6-202ENST00000407418 STAC3Q96MF2 364 aa20.46■□□□□ 0.87
CBX6-202ENST00000407418 THEMISQ8N1K5 641 aaPredicted RBP20.46■□□□□ 0.87
CBX6-202ENST00000407418 DIAPH1O60610 1272 aaKnown RBP20.45■□□□□ 0.86
CBX6-202ENST00000407418 C9orf78Q9NZ63 289 aaPredicted RBP20.45■□□□□ 0.86
CBX6-202ENST00000407418 AKAP17AQ02040 695 aaKnown RBP20.45■□□□□ 0.86
CBX6-202ENST00000407418 RAD21O60216 631 aa20.45■□□□□ 0.86
CBX6-202ENST00000407418 TXNDC2Q86VQ3 553 aa20.45■□□□□ 0.86
CBX6-202ENST00000407418 CSPP1Q1MSJ5 1256 aa20.44■□□□□ 0.86
CBX6-202ENST00000407418 SPRYD3Q8NCJ5 442 aa20.44■□□□□ 0.86
CBX6-202ENST00000407418 SYNE3Q6ZMZ3 975 aa20.43■□□□□ 0.86
CBX6-202ENST00000407418 MYBBP1AQ9BQG0 1328 aaKnown RBP20.42■□□□□ 0.86
CBX6-202ENST00000407418 ST20-MTHFSA0A0A6YYL1 179 aa20.42■□□□□ 0.86
CBX6-202ENST00000407418 ESCO1Q5FWF5 840 aa20.42■□□□□ 0.86
CBX6-202ENST00000407418 PDE3BQ13370 1112 aa20.41■□□□□ 0.86
CBX6-202ENST00000407418 GBP4Q96PP9 640 aa20.41■□□□□ 0.86
CBX6-202ENST00000407418 RRP7AQ9Y3A4 280 aaKnown RBP20.41■□□□□ 0.86
CBX6-202ENST00000407418 SYAP1Q96A49 352 aaPredicted RBP20.39■□□□□ 0.85
CBX6-202ENST00000407418 CLUAP1Q96AJ1 413 aa20.39■□□□□ 0.85
CBX6-202ENST00000407418 KIF16BQ96L93 1317 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms