RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 DEPDC5O75140 1603 aa30.25■■■□□ 2.43
CHKB-201ENST00000406938 KIF3BO15066 747 aa30.24■■■□□ 2.43
CHKB-201ENST00000406938 BCORL1Q5H9F3 1711 aa30.24■■■□□ 2.43
CHKB-201ENST00000406938 NUP155O75694 1391 aa30.23■■■□□ 2.43
CHKB-201ENST00000406938 PZPP20742 1482 aa30.22■■■□□ 2.43
CHKB-201ENST00000406938 RNF17Q9BXT8 1623 aaKnown RBP30.21■■■□□ 2.43
CHKB-201ENST00000406938 MROH1Q8NDA8 1641 aa30.2■■■□□ 2.42
CHKB-201ENST00000406938 PRDM15P57071 1507 aaPredicted RBP30.2■■■□□ 2.42
CHKB-201ENST00000406938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.18■■■□□ 2.429e-8■■■□□ 18
CHKB-201ENST00000406938 SIGLEC1Q9BZZ2 1709 aa30.17■■■□□ 2.42
CHKB-201ENST00000406938 IQGAP3Q86VI3 1631 aa30.17■■■□□ 2.42
CHKB-201ENST00000406938 AGLP35573 1532 aa30.17■■■□□ 2.42
CHKB-201ENST00000406938 FAM135AQ9P2D6 1515 aa30.17■■■□□ 2.42
CHKB-201ENST00000406938 MPHOSPH9Q99550 1183 aa30.16■■■□□ 2.42
CHKB-201ENST00000406938 SLC4A1APQ9BWU0 796 aaKnown RBP30.14■■■□□ 2.41
CHKB-201ENST00000406938 VWDEQ8N2E2 1590 aa30.13■■■□□ 2.41
CHKB-201ENST00000406938 KANK1Q14678 1352 aa30.1■■■□□ 2.41
CHKB-201ENST00000406938 GGT6Q6P531 493 aa30.09■■■□□ 2.41
CHKB-201ENST00000406938 CLSPNQ9HAW4 1339 aa30.06■■■□□ 2.4
CHKB-201ENST00000406938 PKD2Q13563 968 aa30.04■■■□□ 2.4
CHKB-201ENST00000406938 FOXD1Q16676 465 aa30.02■■■□□ 2.4
CHKB-201ENST00000406938 LMTK2Q8IWU2 1503 aa30.02■■■□□ 2.4
CHKB-201ENST00000406938 TET3O43151 1660 aa30.01■■■□□ 2.39
CHKB-201ENST00000406938 CEP152O94986 1710 aa30.01■■■□□ 2.39
CHKB-201ENST00000406938 ABCC3O15438 1527 aa30.01■■■□□ 2.39
CHKB-201ENST00000406938 ARID4BQ4LE39 1312 aaPredicted RBP29.99■■■□□ 2.39
CHKB-201ENST00000406938 ZC3H13Q5T200 1668 aaKnown RBP29.98■■■□□ 2.39
CHKB-201ENST00000406938 EFCAB6Q5THR3 1501 aa29.97■■■□□ 2.39
CHKB-201ENST00000406938 WASHC2CQ9Y4E1 1318 aa29.96■■■□□ 2.39
CHKB-201ENST00000406938 MLECQ14165 292 aa29.95■■■□□ 2.38
CHKB-201ENST00000406938 E9PCH4 1651 aa29.95■■■□□ 2.38
CHKB-201ENST00000406938 ANKRD30BQ9BXX2 1392 aa29.92■■■□□ 2.38
CHKB-201ENST00000406938 CAMSAP1Q5T5Y3 1602 aa29.92■■■□□ 2.38
CHKB-201ENST00000406938 PPP6R1Q9UPN7 881 aa29.9■■■□□ 2.38
CHKB-201ENST00000406938 SIN3AQ96ST3 1273 aa29.86■■■□□ 2.37
CHKB-201ENST00000406938 NPATQ14207 1427 aa29.86■■■□□ 2.37
CHKB-201ENST00000406938 CLTCQ00610 1675 aaKnown RBP29.85■■■□□ 2.37
CHKB-201ENST00000406938 RPRD2Q5VT52 1461 aaKnown RBP29.85■■■□□ 2.37
CHKB-201ENST00000406938 PLA2R1Q13018 1463 aa29.83■■■□□ 2.37
CHKB-201ENST00000406938 ARHGAP31Q2M1Z3 1444 aa29.82■■■□□ 2.36
CHKB-201ENST00000406938 SPHKAPQ2M3C7 1700 aa29.8■■■□□ 2.36
CHKB-201ENST00000406938 NEUROD1Q13562 356 aa29.8■■■□□ 2.36
CHKB-201ENST00000406938 PTPRTO14522 1441 aa29.79■■■□□ 2.36
CHKB-201ENST00000406938 ZEB1P37275 1124 aaPredicted RBP29.79■■■□□ 2.36
CHKB-201ENST00000406938 ESF1Q9H501 851 aaKnown RBP29.78■■■□□ 2.36
CHKB-201ENST00000406938 TRPM2O94759 1503 aa29.78■■■□□ 2.36
CHKB-201ENST00000406938 CNTLNQ9NXG0 1405 aa29.76■■■□□ 2.35
CHKB-201ENST00000406938 CCDC144AA2RUR9 1427 aa29.75■■■□□ 2.35
CHKB-201ENST00000406938 FER1L4A9Z1Z3 1794 aa29.74■■■□□ 2.35
CHKB-201ENST00000406938 MROH2AA6NES4 1674 aa29.72■■■□□ 2.35
CHKB-201ENST00000406938 NOS1P29475 1434 aa29.7■■■□□ 2.35
CHKB-201ENST00000406938 ZMYM3Q14202 1370 aa29.7■■■□□ 2.34
CHKB-201ENST00000406938 PREX1Q8TCU6 1659 aa29.7■■■□□ 2.34
CHKB-201ENST00000406938 CLTCL1P53675 1640 aa29.68■■■□□ 2.34
CHKB-201ENST00000406938 MADDQ8WXG6 1647 aa29.68■■■□□ 2.34
CHKB-201ENST00000406938 ERVK-7P63135 1459 aa29.67■■■□□ 2.34
CHKB-201ENST00000406938 SYNMO15061 1565 aa29.67■■■□□ 2.34
CHKB-201ENST00000406938 UGGT1Q9NYU2 1555 aa29.67■■■□□ 2.34
CHKB-201ENST00000406938 ADAMTSL3P82987 1691 aa29.67■■■□□ 2.34
CHKB-201ENST00000406938 TONSLQ96HA7 1378 aa29.66■■■□□ 2.34
CHKB-201ENST00000406938 CFAP65Q6ZU64 1925 aaKnown RBP29.65■■■□□ 2.34
CHKB-201ENST00000406938 FBXO31Q5XUX0 539 aaPredicted RBP29.63■■■□□ 2.33
CHKB-201ENST00000406938 SPATA31D1Q6ZQQ2 1576 aa29.63■■■□□ 2.33
CHKB-201ENST00000406938 TIMELESSQ9UNS1 1208 aa29.61■■■□□ 2.33
CHKB-201ENST00000406938 RIMS1Q86UR5 1692 aaKnown RBP29.61■■■□□ 2.33
CHKB-201ENST00000406938 C3P01024 1663 aa29.59■■■□□ 2.33
CHKB-201ENST00000406938 PIK3C2BO00750 1634 aa29.59■■■□□ 2.33
CHKB-201ENST00000406938 SPATA31E1Q6ZUB1 1445 aa29.55■■■□□ 2.32
CHKB-201ENST00000406938 CEBPAP49715 358 aaPredicted RBP29.53■■■□□ 2.32
CHKB-201ENST00000406938 L3MBTL2Q969R5 705 aa29.53■■■□□ 2.32
CHKB-201ENST00000406938 NEURL4Q96JN8 1562 aa29.51■■■□□ 2.31
CHKB-201ENST00000406938 SLC52A1Q9NWF4 448 aa29.51■■■□□ 2.31
CHKB-201ENST00000406938 ADGRB3O60242 1522 aa29.51■■■□□ 2.31
CHKB-201ENST00000406938 KIF1BO60333 1816 aa29.5■■■□□ 2.31
CHKB-201ENST00000406938 TNRQ92752 1358 aa29.5■■■□□ 2.31
CHKB-201ENST00000406938 IDI1Q13907 227 aa29.48■■■□□ 2.31
CHKB-201ENST00000406938 RGL3Q3MIN7 710 aa29.47■■■□□ 2.31
CHKB-201ENST00000406938 PLPPR3Q6T4P5 718 aa29.47■■■□□ 2.31
CHKB-201ENST00000406938 PPP1R15AO75807 674 aaPredicted RBP29.44■■■□□ 2.3
CHKB-201ENST00000406938 CHGAP10645 457 aaKnown RBP29.43■■■□□ 2.3
CHKB-201ENST00000406938 PTPRMP28827 1452 aa29.41■■■□□ 2.3
CHKB-201ENST00000406938 TMEM131LA2VDJ0 1609 aa29.41■■■□□ 2.3
CHKB-201ENST00000406938 DCAF11Q8TEB1 546 aa29.4■■■□□ 2.3
CHKB-201ENST00000406938 NLRP1Q9C000 1473 aa29.39■■■□□ 2.3
CHKB-201ENST00000406938 MYO3AQ8NEV4 1616 aa29.36■■■□□ 2.29
CHKB-201ENST00000406938 ZNF326Q5BKZ1 582 aaKnown RBP29.35■■■□□ 2.29
CHKB-201ENST00000406938 KDM2AQ9Y2K7 1162 aa29.34■■■□□ 2.29
CHKB-201ENST00000406938 MYO5BQ9ULV0 1848 aa29.34■■■□□ 2.29
CHKB-201ENST00000406938 A2ML1A8K2U0 1454 aa29.33■■■□□ 2.29
CHKB-201ENST00000406938 IFT172Q9UG01 1749 aa29.33■■■□□ 2.29
CHKB-201ENST00000406938 STAG3Q9UJ98 1225 aa29.33■■■□□ 2.29
CHKB-201ENST00000406938 UHRF1BP1Q6BDS2 1440 aa29.32■■■□□ 2.28
CHKB-201ENST00000406938 KDM5AP29375 1690 aaKnown RBP29.31■■■□□ 2.28
CHKB-201ENST00000406938 KDM4FA0A1W2PPD8 638 aa29.31■■■□□ 2.28
CHKB-201ENST00000406938 NEXMIFQ5QGS0 1516 aa29.3■■■□□ 2.28
CHKB-201ENST00000406938 MYOM2P54296 1465 aa29.29■■■□□ 2.28
CHKB-201ENST00000406938 UBR1Q8IWV7 1749 aa29.29■■■□□ 2.28
CHKB-201ENST00000406938 PPLO60437 1756 aa29.29■■■□□ 2.28
CHKB-201ENST00000406938 NBPF8Q3BBV2 869 aa29.29■■■□□ 2.28
CHKB-201ENST00000406938 RPGRIP1LQ68CZ1 1315 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms