RNA–Protein interactions for RNA: ENST00000406381.6

ERBB2-202, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-202ENST00000406381 HAP1P54257 671 aaPredicted RBP16.14■□□□□ 0.17
ERBB2-202ENST00000406381 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
ERBB2-202ENST00000406381 ARAP1Q96P48 1450 aa16.12■□□□□ 0.17
ERBB2-202ENST00000406381 PKNOX2Q96KN3 472 aa16.12■□□□□ 0.17
ERBB2-202ENST00000406381 APAF1O14727 1248 aa16.11■□□□□ 0.17
ERBB2-202ENST00000406381 NGEFQ8N5V2 710 aa16.11■□□□□ 0.17
ERBB2-202ENST00000406381 KCNJ4P48050 445 aa16.1■□□□□ 0.17
ERBB2-202ENST00000406381 FAM13BQ9NYF5 915 aa16.1■□□□□ 0.17
ERBB2-202ENST00000406381 APBB1O00213 710 aa16.1■□□□□ 0.17
ERBB2-202ENST00000406381 PNISRQ8TF01 805 aaKnown RBP16.1■□□□□ 0.17
ERBB2-202ENST00000406381 CDCA7LQ96GN5 454 aa16.1■□□□□ 0.17
ERBB2-202ENST00000406381 POGKQ9P215 609 aa16.1■□□□□ 0.17
ERBB2-202ENST00000406381 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.09■□□□□ 0.17
ERBB2-202ENST00000406381 BCL2L13Q9BXK5 485 aa16.09■□□□□ 0.17
ERBB2-202ENST00000406381 AMER1Q5JTC6 1135 aaPredicted RBP16.09■□□□□ 0.17
ERBB2-202ENST00000406381 ST18O60284 1047 aa16.08■□□□□ 0.17
ERBB2-202ENST00000406381 TDRD9Q8NDG6 1382 aaKnown RBP16.07■□□□□ 0.16
ERBB2-202ENST00000406381 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
ERBB2-202ENST00000406381 ZKSCAN2Q63HK3 967 aa16.07■□□□□ 0.16
ERBB2-202ENST00000406381 IGF1RP08069 1367 aa16.07■□□□□ 0.16
ERBB2-202ENST00000406381 PHF14O94880 888 aa16.07■□□□□ 0.16
ERBB2-202ENST00000406381 TRAK2O60296 914 aa16.06■□□□□ 0.16
ERBB2-202ENST00000406381 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
ERBB2-202ENST00000406381 MYOM3Q5VTT5 1437 aa16.06■□□□□ 0.16
ERBB2-202ENST00000406381 EIF3AQ14152 1382 aaKnown RBP16.06■□□□□ 0.16
ERBB2-202ENST00000406381 FGD1P98174 961 aa16.05■□□□□ 0.16
ERBB2-202ENST00000406381 RRP7AQ9Y3A4 280 aaKnown RBP16.05■□□□□ 0.16
ERBB2-202ENST00000406381 C22orf23Q9BZE7 217 aa16.05■□□□□ 0.16
ERBB2-202ENST00000406381 SRPK2P78362 688 aaKnown RBP16.04■□□□□ 0.16
ERBB2-202ENST00000406381 CSPP1Q1MSJ5 1256 aa16.04■□□□□ 0.16
ERBB2-202ENST00000406381 AAMPQ13685 434 aa16.04■□□□□ 0.16
ERBB2-202ENST00000406381 OS9Q13438 667 aaPredicted RBP16.04■□□□□ 0.16
ERBB2-202ENST00000406381 MAP7D2Q96T17 732 aa16.04■□□□□ 0.16
ERBB2-202ENST00000406381 KANK1Q14678 1352 aa16.04■□□□□ 0.16
ERBB2-202ENST00000406381 ERICH3Q5RHP9 1530 aa16.03■□□□□ 0.16
ERBB2-202ENST00000406381 KIAA1211Q6ZU35 1233 aa16.02■□□□□ 0.16
ERBB2-202ENST00000406381 TPM2P07951 284 aa16.02■□□□□ 0.16
ERBB2-202ENST00000406381 CCDC144AA2RUR9 1427 aa16.02■□□□□ 0.15
ERBB2-202ENST00000406381 ANKRD45Q5TZF3 282 aa16.01■□□□□ 0.15
ERBB2-202ENST00000406381 ADAMTS8Q9UP79 889 aa16■□□□□ 0.15
ERBB2-202ENST00000406381 NBPF8Q3BBV2 869 aa16■□□□□ 0.15
ERBB2-202ENST00000406381 DDX19BQ9UMR2 479 aa15.99■□□□□ 0.15
ERBB2-202ENST00000406381 RRP9O43818 475 aaKnown RBP15.99■□□□□ 0.15
ERBB2-202ENST00000406381 RSPH4AQ5TD94 716 aa15.99■□□□□ 0.15
ERBB2-202ENST00000406381 MIA2Q96PC5 1412 aa15.99■□□□□ 0.15
ERBB2-202ENST00000406381 NASPP49321 788 aaPredicted RBP15.99■□□□□ 0.15
ERBB2-202ENST00000406381 MTERF4Q7Z6M4 381 aaKnown RBP15.99■□□□□ 0.15
ERBB2-202ENST00000406381 ISY1Q9ULR0 285 aaKnown RBP15.99■□□□□ 0.15
ERBB2-202ENST00000406381 HNRNPMP52272 730 aaKnown RBP eCLIP15.98■□□□□ 0.15
ERBB2-202ENST00000406381 FOXD4L5Q5VV16 416 aaPredicted RBP15.98■□□□□ 0.15
ERBB2-202ENST00000406381 FOXD4L4Q8WXT5 416 aaPredicted RBP15.98■□□□□ 0.15
ERBB2-202ENST00000406381 SAFB2Q14151 953 aaKnown RBP eCLIP15.98■□□□□ 0.15
ERBB2-202ENST00000406381 DZIP1LQ8IYY4 767 aaKnown RBP15.98■□□□□ 0.15
ERBB2-202ENST00000406381 HMMRO75330 724 aa15.97■□□□□ 0.15
ERBB2-202ENST00000406381 PANK1Q8TE04 598 aa15.97■□□□□ 0.15
ERBB2-202ENST00000406381 TNNT3P45378 269 aaPredicted RBP15.97■□□□□ 0.15
ERBB2-202ENST00000406381 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
ERBB2-202ENST00000406381 R3HCC1Q9Y3T6 440 aaKnown RBP15.97■□□□□ 0.15
ERBB2-202ENST00000406381 NUCB2P80303 420 aa15.96■□□□□ 0.15
ERBB2-202ENST00000406381 CUX1P39880 1505 aa15.96■□□□□ 0.15
ERBB2-202ENST00000406381 HFM1A2PYH4 1435 aa15.96■□□□□ 0.15
ERBB2-202ENST00000406381 PRXQ9BXM0 1461 aa15.96■□□□□ 0.15
ERBB2-202ENST00000406381 WASHC2CQ9Y4E1 1318 aa15.95■□□□□ 0.14
ERBB2-202ENST00000406381 NOL8Q76FK4 1167 aaKnown RBP15.95■□□□□ 0.14
ERBB2-202ENST00000406381 HTATSF1O43719 755 aaKnown RBP15.95■□□□□ 0.14
ERBB2-202ENST00000406381 HDGFL2Q7Z4V5 671 aaPredicted RBP15.95■□□□□ 0.14
ERBB2-202ENST00000406381 UBE2Q2Q8WVN8 375 aa15.95■□□□□ 0.14
ERBB2-202ENST00000406381 CASKIN1Q8WXD9 1431 aa15.94■□□□□ 0.14
ERBB2-202ENST00000406381 ESPNB1AK53 854 aa15.94■□□□□ 0.14
ERBB2-202ENST00000406381 PDE3AQ14432 1141 aa15.94■□□□□ 0.14
ERBB2-202ENST00000406381 NAP1L2Q9ULW6 460 aaPredicted RBP15.93■□□□□ 0.14
ERBB2-202ENST00000406381 TRIM6-TRIM34B2RNG4 842 aa15.93■□□□□ 0.14
ERBB2-202ENST00000406381 CARMIL2Q6F5E8 1435 aa15.92■□□□□ 0.14
ERBB2-202ENST00000406381 MCM4P33991 863 aa15.92■□□□□ 0.14
ERBB2-202ENST00000406381 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
ERBB2-202ENST00000406381 NCOA2Q15596 1464 aa15.92■□□□□ 0.14
ERBB2-202ENST00000406381 GRPEL1Q9HAV7 217 aa15.92■□□□□ 0.14
ERBB2-202ENST00000406381 PDS5BQ9NTI5 1447 aa15.91■□□□□ 0.14
ERBB2-202ENST00000406381 KIF16BQ96L93 1317 aa15.91■□□□□ 0.14
ERBB2-202ENST00000406381 CCDC173Q0VFZ6 552 aa15.91■□□□□ 0.14
ERBB2-202ENST00000406381 MCTP1Q6DN14 999 aa15.9■□□□□ 0.14
ERBB2-202ENST00000406381 C14orf37Q86TY3 774 aa15.9■□□□□ 0.14
ERBB2-202ENST00000406381 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.9■□□□□ 0.14
ERBB2-202ENST00000406381 REC8O95072 547 aa15.9■□□□□ 0.14
ERBB2-202ENST00000406381 LNPKQ9C0E8 428 aa15.9■□□□□ 0.14
ERBB2-202ENST00000406381 PDZRN3Q9UPQ7 1066 aa15.9■□□□□ 0.14
ERBB2-202ENST00000406381 ATP6V1DQ9Y5K8 247 aa15.9■□□□□ 0.14
ERBB2-202ENST00000406381 RTF1Q92541 710 aaKnown RBP15.89■□□□□ 0.13
ERBB2-202ENST00000406381 RUNDC1Q96C34 613 aa15.89■□□□□ 0.13
ERBB2-202ENST00000406381 C11orf95C9JLR9 678 aaPredicted RBP15.89■□□□□ 0.13
ERBB2-202ENST00000406381 ZNF771Q7L3S4 317 aaPredicted RBP15.89■□□□□ 0.13
ERBB2-202ENST00000406381 STK26Q9P289 416 aa15.88■□□□□ 0.13
ERBB2-202ENST00000406381 FOXD4L6Q3SYB3 417 aaPredicted RBP15.88■□□□□ 0.13
ERBB2-202ENST00000406381 FOXD4L3Q6VB84 417 aaPredicted RBP15.88■□□□□ 0.13
ERBB2-202ENST00000406381 ZNF644Q9H582 1327 aaPredicted RBP15.88■□□□□ 0.13
ERBB2-202ENST00000406381 TERF2IPQ9NYB0 399 aa15.88■□□□□ 0.13
ERBB2-202ENST00000406381 FYCO1Q9BQS8 1478 aa15.88■□□□□ 0.13
ERBB2-202ENST00000406381 EFCAB2Q5VUJ9 269 aa15.87■□□□□ 0.13
ERBB2-202ENST00000406381 CCDC39Q9UFE4 941 aa15.87■□□□□ 0.13
ERBB2-202ENST00000406381 TIAM1Q13009 1591 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms