RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 SNAPC4Q5SXM2 1469 aa17.86■□□□□ 0.45
DUSP28-202ENST00000405954 MYOM3Q5VTT5 1437 aa17.86■□□□□ 0.45
DUSP28-202ENST00000405954 KIF7Q2M1P5 1343 aa17.85■□□□□ 0.45
DUSP28-202ENST00000405954 CDK13Q14004 1512 aaKnown RBP17.85■□□□□ 0.45
DUSP28-202ENST00000405954 MAP7D2Q96T17 732 aa17.85■□□□□ 0.45
DUSP28-202ENST00000405954 MAGI3Q5TCQ9 1506 aa17.84■□□□□ 0.45
DUSP28-202ENST00000405954 SLC4A1APQ9BWU0 796 aaKnown RBP17.84■□□□□ 0.45
DUSP28-202ENST00000405954 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.83■□□□□ 0.45
DUSP28-202ENST00000405954 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
DUSP28-202ENST00000405954 RNF123Q5XPI4 1314 aa17.81■□□□□ 0.44
DUSP28-202ENST00000405954 NAP1L2Q9ULW6 460 aaPredicted RBP17.81■□□□□ 0.44
DUSP28-202ENST00000405954 MCM4P33991 863 aa17.81■□□□□ 0.44
DUSP28-202ENST00000405954 PNISRQ8TF01 805 aaKnown RBP17.81■□□□□ 0.44
DUSP28-202ENST00000405954 ABCA10Q8WWZ4 1543 aa17.8■□□□□ 0.44
DUSP28-202ENST00000405954 KDM2AQ9Y2K7 1162 aa17.8■□□□□ 0.44
DUSP28-202ENST00000405954 URB2Q14146 1524 aaKnown RBP17.8■□□□□ 0.44
DUSP28-202ENST00000405954 PLCD3Q8N3E9 789 aa17.79■□□□□ 0.44
DUSP28-202ENST00000405954 PTMAP06454 111 aaKnown RBP17.79■□□□□ 0.44
DUSP28-202ENST00000405954 DNMBPQ6XZF7 1577 aa17.79■□□□□ 0.44
DUSP28-202ENST00000405954 DENND4BO75064 1496 aaPredicted RBP17.78■□□□□ 0.44
DUSP28-202ENST00000405954 CTTNBP2Q8WZ74 1663 aa17.77■□□□□ 0.44
DUSP28-202ENST00000405954 KDM5BQ9UGL1 1544 aa17.77■□□□□ 0.44
DUSP28-202ENST00000405954 C20orf194Q5TEA3 1177 aa17.77■□□□□ 0.44
DUSP28-202ENST00000405954 GAPVD1Q14C86 1478 aa17.77■□□□□ 0.44
DUSP28-202ENST00000405954 UQCRHLA0A096LP55 91 aa17.77■□□□□ 0.44
DUSP28-202ENST00000405954 UQCRHP07919 91 aa17.77■□□□□ 0.44
DUSP28-202ENST00000405954 PDE3BQ13370 1112 aa17.76■□□□□ 0.43
DUSP28-202ENST00000405954 C8orf34Q49A92 452 aa17.76■□□□□ 0.43
DUSP28-202ENST00000405954 GOLGA6L22H0YM25 854 aa17.75■□□□□ 0.43
DUSP28-202ENST00000405954 HSCBQ8IWL3 235 aa17.74■□□□□ 0.43
DUSP28-202ENST00000405954 DDX11L8A8MPP1 907 aa17.74■□□□□ 0.43
DUSP28-202ENST00000405954 EFCAB5A4FU69 1503 aa17.74■□□□□ 0.43
DUSP28-202ENST00000405954 VGLL3A8MV65 326 aa17.73■□□□□ 0.43
DUSP28-202ENST00000405954 AEBP2Q6ZN18 517 aaPredicted RBP17.73■□□□□ 0.43
DUSP28-202ENST00000405954 FOXD4L1Q9NU39 408 aa17.73■□□□□ 0.43
DUSP28-202ENST00000405954 CHMP5Q9NZZ3 219 aa17.73■□□□□ 0.43
DUSP28-202ENST00000405954 PAXIP1Q6ZW49 1069 aaPredicted RBP17.72■□□□□ 0.43
DUSP28-202ENST00000405954 CHMP7Q8WUX9 453 aaPredicted RBP17.71■□□□□ 0.43
DUSP28-202ENST00000405954 GRIN2BQ13224 1484 aa17.71■□□□□ 0.43
DUSP28-202ENST00000405954 NASPP49321 788 aaPredicted RBP17.71■□□□□ 0.43
DUSP28-202ENST00000405954 CC2D1BQ5T0F9 858 aaKnown RBP17.71■□□□□ 0.43
DUSP28-202ENST00000405954 HSP90AB1P08238 724 aaKnown RBP17.71■□□□□ 0.43
DUSP28-202ENST00000405954 KIF21AQ7Z4S6 1674 aa17.71■□□□□ 0.43
DUSP28-202ENST00000405954 MFAP1P55081 439 aaKnown RBP17.7■□□□□ 0.42
DUSP28-202ENST00000405954 ZSCAN30Q86W11 494 aa17.7■□□□□ 0.42
DUSP28-202ENST00000405954 GBP4Q96PP9 640 aa17.7■□□□□ 0.42
DUSP28-202ENST00000405954 PRDM4Q9UKN5 801 aa17.7■□□□□ 0.42
DUSP28-202ENST00000405954 SUPT6HQ7KZ85 1726 aaKnown RBP17.7■□□□□ 0.42
DUSP28-202ENST00000405954 MTERF4Q7Z6M4 381 aaKnown RBP17.69■□□□□ 0.42
DUSP28-202ENST00000405954 ERBB4Q15303 1308 aa17.69■□□□□ 0.42
DUSP28-202ENST00000405954 LAMC3Q9Y6N6 1575 aa17.69■□□□□ 0.42
DUSP28-202ENST00000405954 WDR43Q15061 677 aaKnown RBP eCLIP17.69■□□□□ 0.42
DUSP28-202ENST00000405954 CBX1P83916 185 aa17.68■□□□□ 0.42
DUSP28-202ENST00000405954 XPCQ01831 940 aaPredicted RBP17.68■□□□□ 0.42
DUSP28-202ENST00000405954 THOC2Q8NI27 1593 aaKnown RBP17.68■□□□□ 0.42
DUSP28-202ENST00000405954 SMAP1Q8IYB5 467 aaPredicted RBP17.67■□□□□ 0.42
DUSP28-202ENST00000405954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.65■□□□□ 0.42
DUSP28-202ENST00000405954 ZNF771Q7L3S4 317 aaPredicted RBP17.65■□□□□ 0.42
DUSP28-202ENST00000405954 TBC1D2Q9BYX2 928 aa17.64■□□□□ 0.42
DUSP28-202ENST00000405954 CUL7Q14999 1698 aa17.64■□□□□ 0.41
DUSP28-202ENST00000405954 MYBBP1AQ9BQG0 1328 aaKnown RBP17.64■□□□□ 0.41
DUSP28-202ENST00000405954 CENPJQ9HC77 1338 aaPredicted RBP17.64■□□□□ 0.41
DUSP28-202ENST00000405954 UGGT2Q9NYU1 1516 aa17.64■□□□□ 0.41
DUSP28-202ENST00000405954 CCDC173Q0VFZ6 552 aa17.64■□□□□ 0.41
DUSP28-202ENST00000405954 PKD2Q13563 968 aa17.64■□□□□ 0.41
DUSP28-202ENST00000405954 CARD11Q9BXL7 1154 aa17.64■□□□□ 0.41
DUSP28-202ENST00000405954 DDX49Q9Y6V7 483 aaKnown RBP17.64■□□□□ 0.41
DUSP28-202ENST00000405954 TAF7LQ5H9L4 462 aa17.63■□□□□ 0.41
DUSP28-202ENST00000405954 ZNF608Q9ULD9 1512 aaPredicted RBP17.63■□□□□ 0.41
DUSP28-202ENST00000405954 SEC24BO95487 1268 aa17.63■□□□□ 0.41
DUSP28-202ENST00000405954 EHBP1L1Q8N3D4 1523 aa17.62■□□□□ 0.41
DUSP28-202ENST00000405954 NLRP13Q86W25 1043 aa17.62■□□□□ 0.41
DUSP28-202ENST00000405954 EPRSP07814 1512 aaKnown RBP17.62■□□□□ 0.41
DUSP28-202ENST00000405954 RALBP1Q15311 655 aa17.62■□□□□ 0.41
DUSP28-202ENST00000405954 CGNQ9P2M7 1197 aaKnown RBP17.62■□□□□ 0.41
DUSP28-202ENST00000405954 OFD1O75665 1012 aa17.61■□□□□ 0.41
DUSP28-202ENST00000405954 CFDP1Q9UEE9 299 aaPredicted RBP17.61■□□□□ 0.41
DUSP28-202ENST00000405954 IGSF3O75054 1194 aa17.6■□□□□ 0.41
DUSP28-202ENST00000405954 RGL3Q3MIN7 710 aa17.6■□□□□ 0.41
DUSP28-202ENST00000405954 FSD2A1L4K1 749 aa17.6■□□□□ 0.41
DUSP28-202ENST00000405954 PPP4R3BQ5MIZ7 849 aa17.6■□□□□ 0.41
DUSP28-202ENST00000405954 MRC2Q9UBG0 1479 aa17.6■□□□□ 0.41
DUSP28-202ENST00000405954 SAMD9Q5K651 1589 aa17.59■□□□□ 0.41
DUSP28-202ENST00000405954 NCOA1Q15788 1441 aa17.58■□□□□ 0.41
DUSP28-202ENST00000405954 MAPK8IP3Q9UPT6 1336 aa17.58■□□□□ 0.41
DUSP28-202ENST00000405954 ISY1Q9ULR0 285 aaKnown RBP17.58■□□□□ 0.4
DUSP28-202ENST00000405954 ANKRD30BQ9BXX2 1392 aa17.57■□□□□ 0.4
DUSP28-202ENST00000405954 E9PSI1 815 aa17.57■□□□□ 0.4
DUSP28-202ENST00000405954 CHMP4AQ9BY43 222 aa17.57■□□□□ 0.4
DUSP28-202ENST00000405954 PRG4Q92954 1404 aaPredicted RBP17.57■□□□□ 0.4
DUSP28-202ENST00000405954 CSPP1Q1MSJ5 1256 aa17.56■□□□□ 0.4
DUSP28-202ENST00000405954 TPRNQ4KMQ1 711 aa17.56■□□□□ 0.4
DUSP28-202ENST00000405954 RIPK4P57078 832 aa17.56■□□□□ 0.4
DUSP28-202ENST00000405954 SKOR2Q2VWA4 1001 aaPredicted RBP17.56■□□□□ 0.4
DUSP28-202ENST00000405954 KIF15Q9NS87 1388 aa17.55■□□□□ 0.4
DUSP28-202ENST00000405954 PLCB2Q00722 1185 aa17.55■□□□□ 0.4
DUSP28-202ENST00000405954 COG6Q9Y2V7 657 aa17.55■□□□□ 0.4
DUSP28-202ENST00000405954 USP47Q96K76 1375 aa17.55■□□□□ 0.4
DUSP28-202ENST00000405954 DAPK1P53355 1430 aa17.54■□□□□ 0.4
DUSP28-202ENST00000405954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms