RNA–Protein interactions for RNA: ENST00000405141.5

NCOA1-204, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NCOA1, Length 7,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-204ENST00000405141 SLC4A10Q6U841 1118 aa11.9□□□□□ -0.5
NCOA1-204ENST00000405141 RSPH6AQ9H0K4 717 aa11.9□□□□□ -0.5
NCOA1-204ENST00000405141 HSP90AA2PQ14568 343 aaPredicted RBP11.89□□□□□ -0.51
NCOA1-204ENST00000405141 PHLDB1Q86UU1 1377 aa11.89□□□□□ -0.51
NCOA1-204ENST00000405141 FOXD4L6Q3SYB3 417 aaPredicted RBP11.89□□□□□ -0.51
NCOA1-204ENST00000405141 FOXD4L3Q6VB84 417 aaPredicted RBP11.89□□□□□ -0.51
NCOA1-204ENST00000405141 DDX11L8A8MPP1 907 aa11.88□□□□□ -0.51
NCOA1-204ENST00000405141 SYAP1Q96A49 352 aaPredicted RBP11.88□□□□□ -0.51
NCOA1-204ENST00000405141 KIF21BO75037 1637 aa11.88□□□□□ -0.51
NCOA1-204ENST00000405141 GNL2Q13823 731 aaKnown RBP11.87□□□□□ -0.51
NCOA1-204ENST00000405141 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.87□□□□□ -0.51
NCOA1-204ENST00000405141 HSP90B1P14625 803 aaKnown RBP11.87□□□□□ -0.51
NCOA1-204ENST00000405141 KIF7Q2M1P5 1343 aa11.86□□□□□ -0.51
NCOA1-204ENST00000405141 ANKRD45Q5TZF3 282 aa11.86□□□□□ -0.51
NCOA1-204ENST00000405141 ELL2O00472 640 aaPredicted RBP11.86□□□□□ -0.51
NCOA1-204ENST00000405141 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
NCOA1-204ENST00000405141 CARMIL2Q6F5E8 1435 aa11.85□□□□□ -0.51
NCOA1-204ENST00000405141 CCDC7Q96M83 1385 aa11.85□□□□□ -0.51
NCOA1-204ENST00000405141 VSIG10Q8N0Z9 540 aa11.85□□□□□ -0.51
NCOA1-204ENST00000405141 CNTLNQ9NXG0 1405 aa11.85□□□□□ -0.51
NCOA1-204ENST00000405141 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
NCOA1-204ENST00000405141 APAF1O14727 1248 aa11.85□□□□□ -0.51
NCOA1-204ENST00000405141 KIF3BO15066 747 aa11.85□□□□□ -0.51
NCOA1-204ENST00000405141 ATAD2BQ9ULI0 1458 aa11.85□□□□□ -0.51
NCOA1-204ENST00000405141 DDX49Q9Y6V7 483 aaKnown RBP11.84□□□□□ -0.51
NCOA1-204ENST00000405141 E9PSI1 815 aa11.84□□□□□ -0.51
NCOA1-204ENST00000405141 WASHC2AQ641Q2 1341 aa11.84□□□□□ -0.51
NCOA1-204ENST00000405141 CCDC144AA2RUR9 1427 aa11.84□□□□□ -0.51
NCOA1-204ENST00000405141 NFKBIBQ15653 356 aa11.83□□□□□ -0.52
NCOA1-204ENST00000405141 ST18O60284 1047 aa11.82□□□□□ -0.52
NCOA1-204ENST00000405141 NPHP1O15259 732 aa11.81□□□□□ -0.52
NCOA1-204ENST00000405141 STK31Q9BXU1 1019 aa11.81□□□□□ -0.52
NCOA1-204ENST00000405141 ZKSCAN2Q63HK3 967 aa11.81□□□□□ -0.52
NCOA1-204ENST00000405141 PDS5BQ9NTI5 1447 aa11.81□□□□□ -0.52
NCOA1-204ENST00000405141 RILPL2Q969X0 211 aa11.81□□□□□ -0.52
NCOA1-204ENST00000405141 IL27Q8NEV9 243 aa11.8□□□□□ -0.52
NCOA1-204ENST00000405141 ZNF330Q9Y3S2 320 aaPredicted RBP11.8□□□□□ -0.52
NCOA1-204ENST00000405141 HMMRO75330 724 aa11.8□□□□□ -0.52
NCOA1-204ENST00000405141 BRPF3Q9ULD4 1205 aa11.8□□□□□ -0.52
NCOA1-204ENST00000405141 TERF2IPQ9NYB0 399 aa11.79□□□□□ -0.52
NCOA1-204ENST00000405141 CDCA7LQ96GN5 454 aa11.79□□□□□ -0.52
NCOA1-204ENST00000405141 AKNAQ7Z591 1439 aa11.79□□□□□ -0.52
NCOA1-204ENST00000405141 CHMP3Q9Y3E7 222 aa11.79□□□□□ -0.52
NCOA1-204ENST00000405141 EFCAB2Q5VUJ9 269 aa11.79□□□□□ -0.52
NCOA1-204ENST00000405141 SPAG9O60271 1321 aaKnown RBP11.79□□□□□ -0.52
NCOA1-204ENST00000405141 PANK1Q8TE04 598 aa11.78□□□□□ -0.52
NCOA1-204ENST00000405141 NUTM2FA1L443 756 aa11.78□□□□□ -0.52
NCOA1-204ENST00000405141 PRDM2Q13029 1718 aa11.78□□□□□ -0.52
NCOA1-204ENST00000405141 FGD6Q6ZV73 1430 aa11.78□□□□□ -0.52
NCOA1-204ENST00000405141 ZNF644Q9H582 1327 aaPredicted RBP11.77□□□□□ -0.52
NCOA1-204ENST00000405141 CCDC9Q9Y3X0 531 aaKnown RBP11.77□□□□□ -0.53
NCOA1-204ENST00000405141 CGNL1Q0VF96 1302 aa11.77□□□□□ -0.53
NCOA1-204ENST00000405141 SKOR2Q2VWA4 1001 aaPredicted RBP11.77□□□□□ -0.53
NCOA1-204ENST00000405141 CADPSQ9ULU8 1353 aa11.77□□□□□ -0.53
NCOA1-204ENST00000405141 PHF14O94880 888 aa11.77□□□□□ -0.53
NCOA1-204ENST00000405141 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.53
NCOA1-204ENST00000405141 LRRC9Q6ZRR7 1453 aa11.76□□□□□ -0.53
NCOA1-204ENST00000405141 HTATSF1O43719 755 aaKnown RBP11.76□□□□□ -0.53
NCOA1-204ENST00000405141 LTV1Q96GA3 475 aaPredicted RBP11.76□□□□□ -0.53
NCOA1-204ENST00000405141 GPATCH3Q96I76 525 aa11.76□□□□□ -0.53
NCOA1-204ENST00000405141 CSPP1Q1MSJ5 1256 aa11.76□□□□□ -0.53
NCOA1-204ENST00000405141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
NCOA1-204ENST00000405141 UACAQ9BZF9 1416 aa11.75□□□□□ -0.53
NCOA1-204ENST00000405141 HDGFP51858 240 aaKnown RBP11.75□□□□□ -0.53
NCOA1-204ENST00000405141 TPM4P67936 248 aa11.75□□□□□ -0.53
NCOA1-204ENST00000405141 KIF16BQ96L93 1317 aa11.75□□□□□ -0.53
NCOA1-204ENST00000405141 CREBRFQ8IUR6 639 aa11.75□□□□□ -0.53
NCOA1-204ENST00000405141 FAM13BQ9NYF5 915 aa11.75□□□□□ -0.53
NCOA1-204ENST00000405141 MCTP1Q6DN14 999 aa11.74□□□□□ -0.53
NCOA1-204ENST00000405141 FANCD2Q9BXW9 1451 aa11.74□□□□□ -0.53
NCOA1-204ENST00000405141 DZIP1LQ8IYY4 767 aaKnown RBP11.74□□□□□ -0.53
NCOA1-204ENST00000405141 CHMP5Q9NZZ3 219 aa11.74□□□□□ -0.53
NCOA1-204ENST00000405141 ISY1Q9ULR0 285 aaKnown RBP11.74□□□□□ -0.53
NCOA1-204ENST00000405141 CCDC184Q52MB2 194 aa11.74□□□□□ -0.53
NCOA1-204ENST00000405141 CLSTN1O94985 981 aa11.73□□□□□ -0.53
NCOA1-204ENST00000405141 TNNT3P45378 269 aaPredicted RBP11.73□□□□□ -0.53
NCOA1-204ENST00000405141 FRAT2O75474 233 aaPredicted RBP11.73□□□□□ -0.53
NCOA1-204ENST00000405141 ADAMTS8Q9UP79 889 aa11.73□□□□□ -0.53
NCOA1-204ENST00000405141 WASHC2CQ9Y4E1 1318 aa11.73□□□□□ -0.53
NCOA1-204ENST00000405141 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
NCOA1-204ENST00000405141 LMOD3Q0VAK6 560 aa11.72□□□□□ -0.53
NCOA1-204ENST00000405141 NECTIN2Q92692 538 aa11.72□□□□□ -0.53
NCOA1-204ENST00000405141 C22orf23Q9BZE7 217 aa11.72□□□□□ -0.53
NCOA1-204ENST00000405141 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
NCOA1-204ENST00000405141 MYOM3Q5VTT5 1437 aa11.72□□□□□ -0.53
NCOA1-204ENST00000405141 ZNF592Q92610 1267 aa11.72□□□□□ -0.53
NCOA1-204ENST00000405141 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
NCOA1-204ENST00000405141 GORABQ5T7V8 394 aa11.72□□□□□ -0.53
NCOA1-204ENST00000405141 DDX19BQ9UMR2 479 aa11.72□□□□□ -0.53
NCOA1-204ENST00000405141 RIPK4P57078 832 aa11.71□□□□□ -0.53
NCOA1-204ENST00000405141 LNPKQ9C0E8 428 aa11.71□□□□□ -0.53
NCOA1-204ENST00000405141 IGF1RP08069 1367 aa11.71□□□□□ -0.53
NCOA1-204ENST00000405141 MSH5O43196 834 aa11.71□□□□□ -0.54
NCOA1-204ENST00000405141 AMPHP49418 695 aa11.7□□□□□ -0.54
NCOA1-204ENST00000405141 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
NCOA1-204ENST00000405141 H3BQV1 296 aa11.7□□□□□ -0.54
NCOA1-204ENST00000405141 IFFO2Q5TF58 517 aa11.7□□□□□ -0.54
NCOA1-204ENST00000405141 ARAP1Q96P48 1450 aa11.7□□□□□ -0.54
NCOA1-204ENST00000405141 CUX1P39880 1505 aa11.7□□□□□ -0.54
NCOA1-204ENST00000405141 MINK1Q8N4C8 1332 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms