RNA–Protein interactions for RNA: ENST00000405141.5

NCOA1-204, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NCOA1, Length 7,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-204ENST00000405141 DCAF8L2P0C7V8 631 aa16.26■□□□□ 0.19
NCOA1-204ENST00000405141 SUPT5HO00267 1087 aaKnown RBP15.83■□□□□ 0.12
NCOA1-204ENST00000405141 NISCHQ9Y2I1 1504 aa15.71■□□□□ 0.11
NCOA1-204ENST00000405141 SHROOM4Q9ULL8 1493 aa15.62■□□□□ 0.09
NCOA1-204ENST00000405141 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.06
NCOA1-204ENST00000405141 PCGF6Q9BYE7 350 aa15.1■□□□□ 0.01
NCOA1-204ENST00000405141 TTBK1Q5TCY1 1321 aaPredicted RBP14.96□□□□□ -0.01
NCOA1-204ENST00000405141 FAM9AQ8IZU1 332 aaPredicted RBP14.95□□□□□ -0.02
NCOA1-204ENST00000405141 PELP1Q8IZL8 1130 aaKnown RBP14.89□□□□□ -0.03
NCOA1-204ENST00000405141 APLP2Q06481 763 aa14.72□□□□□ -0.05
NCOA1-204ENST00000405141 CCER1Q8TC90 406 aaPredicted RBP14.62□□□□□ -0.07
NCOA1-204ENST00000405141 CENPBP07199 599 aaPredicted RBP14.62□□□□□ -0.07
NCOA1-204ENST00000405141 RANGAP1P46060 587 aaPredicted RBP14.6□□□□□ -0.07
NCOA1-204ENST00000405141 ZEB1P37275 1124 aaPredicted RBP14.59□□□□□ -0.07
NCOA1-204ENST00000405141 YTHDC1Q96MU7 727 aaKnown RBP14.56□□□□□ -0.08
NCOA1-204ENST00000405141 TRIM41Q8WV44 630 aa14.54□□□□□ -0.08
NCOA1-204ENST00000405141 PPARGC1BQ86YN6 1023 aaKnown RBP14.51□□□□□ -0.09
NCOA1-204ENST00000405141 ERICH6Q7L0X2 663 aa14.45□□□□□ -0.1
NCOA1-204ENST00000405141 HRCP23327 699 aa14.43□□□□□ -0.1
NCOA1-204ENST00000405141 TRIM26Q12899 539 aaPredicted RBP14.32□□□□□ -0.12
NCOA1-204ENST00000405141 UBTFP17480 764 aaKnown RBP14.31□□□□□ -0.12
NCOA1-204ENST00000405141 ATP1B4Q9UN42 357 aaPredicted RBP14.29□□□□□ -0.12
NCOA1-204ENST00000405141 LOC105371045A0A1W2PR82 267 aa14.29□□□□□ -0.12
NCOA1-204ENST00000405141 MYT1Q01538 1121 aa14.19□□□□□ -0.14
NCOA1-204ENST00000405141 NEFLP07196 543 aa14.17□□□□□ -0.14
NCOA1-204ENST00000405141 CHIC1Q5VXU3 224 aa14.15□□□□□ -0.14
NCOA1-204ENST00000405141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
NCOA1-204ENST00000405141 ITGAEP38570 1179 aa14.01□□□□□ -0.17
NCOA1-204ENST00000405141 HNRNPUL2Q1KMD3 747 aaKnown RBP13.99□□□□□ -0.17
NCOA1-204ENST00000405141 DIEXFQ68CQ4 756 aaKnown RBP13.92□□□□□ -0.18
NCOA1-204ENST00000405141 CNGB1Q14028 1251 aaPredicted RBP13.85□□□□□ -0.19
NCOA1-204ENST00000405141 POLR3GLQ9BT43 218 aa13.85□□□□□ -0.19
NCOA1-204ENST00000405141 GTF3C3Q9Y5Q9 886 aa13.82□□□□□ -0.2
NCOA1-204ENST00000405141 BCANQ96GW7 911 aa13.74□□□□□ -0.21
NCOA1-204ENST00000405141 DAXXQ9UER7 740 aaPredicted RBP13.7□□□□□ -0.22
NCOA1-204ENST00000405141 NEUROD1Q13562 356 aa13.6□□□□□ -0.23
NCOA1-204ENST00000405141 ACIN1Q9UKV3 1341 aaKnown RBP13.59□□□□□ -0.23
NCOA1-204ENST00000405141 ABCC9O60706 1549 aa13.58□□□□□ -0.24
NCOA1-204ENST00000405141 FAM50AQ14320 339 aaKnown RBP13.58□□□□□ -0.24
NCOA1-204ENST00000405141 ZNF316A6NFI3 1004 aaPredicted RBP13.54□□□□□ -0.24
NCOA1-204ENST00000405141 RTL5Q5HYW3 569 aaPredicted RBP13.54□□□□□ -0.24
NCOA1-204ENST00000405141 MYT1LQ9UL68 1186 aa13.49□□□□□ -0.25
NCOA1-204ENST00000405141 PABPN1Q86U42 306 aaKnown RBP eCLIP13.46□□□□□ -0.25
NCOA1-204ENST00000405141 TRIM52Q96A61 297 aa13.45□□□□□ -0.26
NCOA1-204ENST00000405141 ANP32CO43423 234 aa13.42□□□□□ -0.26
NCOA1-204ENST00000405141 SLC4A1APQ9BWU0 796 aaKnown RBP13.41□□□□□ -0.26
NCOA1-204ENST00000405141 CLSPNQ9HAW4 1339 aa13.41□□□□□ -0.26
NCOA1-204ENST00000405141 CDK11AQ9UQ88 783 aaPredicted RBP13.41□□□□□ -0.26
NCOA1-204ENST00000405141 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
NCOA1-204ENST00000405141 ZNF326Q5BKZ1 582 aaKnown RBP13.35□□□□□ -0.27
NCOA1-204ENST00000405141 DCAF1Q9Y4B6 1507 aa13.32□□□□□ -0.28
NCOA1-204ENST00000405141 MYO15BQ96JP2 1530 aa13.29□□□□□ -0.28
NCOA1-204ENST00000405141 FKBP8Q14318 412 aa13.28□□□□□ -0.28
NCOA1-204ENST00000405141 P3H3Q8IVL6 736 aa13.25□□□□□ -0.29
NCOA1-204ENST00000405141 NPM2Q86SE8 214 aaKnown RBP13.23□□□□□ -0.29
NCOA1-204ENST00000405141 SCRIBQ14160 1630 aa13.22□□□□□ -0.29
NCOA1-204ENST00000405141 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
NCOA1-204ENST00000405141 ARID3CA6NKF2 412 aa13.2□□□□□ -0.3
NCOA1-204ENST00000405141 MIER1Q8N108 512 aa13.16□□□□□ -0.3
NCOA1-204ENST00000405141 BCL11AQ9H165 835 aa13.16□□□□□ -0.3
NCOA1-204ENST00000405141 ANP32AP39687 249 aaKnown RBP13.15□□□□□ -0.3
NCOA1-204ENST00000405141 DDX10Q13206 875 aaKnown RBP13.14□□□□□ -0.31
NCOA1-204ENST00000405141 CANXP27824 592 aaKnown RBP13.11□□□□□ -0.31
NCOA1-204ENST00000405141 HNRNPUQ00839 825 aaKnown RBP eCLIP13.1□□□□□ -0.31
NCOA1-204ENST00000405141 NBR1Q14596 966 aa13.08□□□□□ -0.32
NCOA1-204ENST00000405141 FAM9BQ8IZU0 186 aa13.08□□□□□ -0.32
NCOA1-204ENST00000405141 IRX6P78412 446 aaPredicted RBP13.07□□□□□ -0.32
NCOA1-204ENST00000405141 ZCCHC6Q5VYS8 1495 aaKnown RBP13.07□□□□□ -0.32
NCOA1-204ENST00000405141 HIRIP3Q9BW71 556 aaPredicted RBP13.04□□□□□ -0.32
NCOA1-204ENST00000405141 EIF5BO60841 1220 aaKnown RBP13.02□□□□□ -0.32
NCOA1-204ENST00000405141 TONSLQ96HA7 1378 aa13.02□□□□□ -0.33
NCOA1-204ENST00000405141 CCDC180Q9P1Z9 1646 aa13.02□□□□□ -0.33
NCOA1-204ENST00000405141 ZNF777Q9ULD5 760 aaPredicted RBP13.02□□□□□ -0.33
NCOA1-204ENST00000405141 FBLN2P98095 1184 aa13.01□□□□□ -0.33
NCOA1-204ENST00000405141 SALL2Q9Y467 1007 aaPredicted RBP13.01□□□□□ -0.33
NCOA1-204ENST00000405141 ZBTB47Q9UFB7 747 aaPredicted RBP12.96□□□□□ -0.33
NCOA1-204ENST00000405141 CHIC2Q9UKJ5 165 aa12.93□□□□□ -0.34
NCOA1-204ENST00000405141 SLC24A1O60721 1099 aa12.92□□□□□ -0.34
NCOA1-204ENST00000405141 CCDC136Q96JN2 1154 aa12.91□□□□□ -0.34
NCOA1-204ENST00000405141 ARXQ96QS3 562 aa12.9□□□□□ -0.34
NCOA1-204ENST00000405141 SENP3-EIF4A1A0A087X0R7 540 aa12.88□□□□□ -0.35
NCOA1-204ENST00000405141 MRS2Q9HD23 443 aa12.87□□□□□ -0.35
NCOA1-204ENST00000405141 ANP32EQ9BTT0 268 aa12.85□□□□□ -0.35
NCOA1-204ENST00000405141 CEP162Q5TB80 1403 aa12.84□□□□□ -0.35
NCOA1-204ENST00000405141 CLIP1P30622 1438 aa12.83□□□□□ -0.35
NCOA1-204ENST00000405141 TMC1Q8TDI8 760 aa12.83□□□□□ -0.36
NCOA1-204ENST00000405141 NEFMP07197 916 aa12.79□□□□□ -0.36
NCOA1-204ENST00000405141 HSP90AA1P07900 732 aaKnown RBP12.79□□□□□ -0.36
NCOA1-204ENST00000405141 KDM2AQ9Y2K7 1162 aa12.79□□□□□ -0.36
NCOA1-204ENST00000405141 SUPT16HQ9Y5B9 1047 aaKnown RBP12.78□□□□□ -0.36
NCOA1-204ENST00000405141 UPF2Q9HAU5 1272 aaKnown RBP12.76□□□□□ -0.37
NCOA1-204ENST00000405141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.75□□□□□ -0.375e-6■□□□□ 10.5
NCOA1-204ENST00000405141 RRP7BPQ9NSQ0 103 aa12.75□□□□□ -0.37
NCOA1-204ENST00000405141 ANP32BQ92688 251 aaKnown RBP12.74□□□□□ -0.37
NCOA1-204ENST00000405141 RSF1Q96T23 1441 aaPredicted RBP12.74□□□□□ -0.37
NCOA1-204ENST00000405141 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
NCOA1-204ENST00000405141 GOLGA3Q08378 1498 aa12.74□□□□□ -0.37
NCOA1-204ENST00000405141 WDR43Q15061 677 aaKnown RBP eCLIP12.71□□□□□ -0.37
NCOA1-204ENST00000405141 EIF4G2P78344 907 aaKnown RBP eCLIP12.7□□□□□ -0.381e-6■■■□□ 18
NCOA1-204ENST00000405141 MTUS2Q5JR59 1369 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms