RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 SMG6Q86US8 1419 aaKnown RBP21.35■■□□□ 1.01
TOM1-203ENST00000404284 UNC13BO14795 1591 aa21.34■■□□□ 1.01
TOM1-203ENST00000404284 KDM2AQ9Y2K7 1162 aa21.33■■□□□ 1.01
TOM1-203ENST00000404284 DCAF11Q8TEB1 546 aa21.33■■□□□ 1
TOM1-203ENST00000404284 SHROOM2Q13796 1616 aa21.33■■□□□ 1
TOM1-203ENST00000404284 ST20-MTHFSA0A0A6YYL1 179 aa21.32■■□□□ 1
TOM1-203ENST00000404284 CNGB1Q14028 1251 aaPredicted RBP21.32■■□□□ 1
TOM1-203ENST00000404284 RSPH4AQ5TD94 716 aa21.32■■□□□ 1
TOM1-203ENST00000404284 TRPM1Q7Z4N2 1603 aa21.31■■□□□ 1
TOM1-203ENST00000404284 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.31■■□□□ 13e-6■■■■■ 31
TOM1-203ENST00000404284 ANO8Q9HCE9 1232 aaPredicted RBP21.3■■□□□ 1
TOM1-203ENST00000404284 ARHGAP5Q13017 1502 aa21.3■■□□□ 1
TOM1-203ENST00000404284 PRAG1Q86YV5 1406 aa21.29■■□□□ 1
TOM1-203ENST00000404284 PNISRQ8TF01 805 aaKnown RBP21.28■■□□□ 1
TOM1-203ENST00000404284 PLXNC1O60486 1568 aa21.28■■□□□ 1
TOM1-203ENST00000404284 PLA2R1Q13018 1463 aa21.28■■□□□ 1
TOM1-203ENST00000404284 CCDC144AA2RUR9 1427 aa21.28■■□□□ 1
TOM1-203ENST00000404284 NUDCQ9Y266 331 aa21.26■□□□□ 0.99
TOM1-203ENST00000404284 MYO5CQ9NQX4 1742 aa21.26■□□□□ 0.99
TOM1-203ENST00000404284 B4GALNT3Q6L9W6 998 aa21.25■□□□□ 0.99
TOM1-203ENST00000404284 IQGAP3Q86VI3 1631 aa21.25■□□□□ 0.99
TOM1-203ENST00000404284 FANCIQ9NVI1 1328 aa21.25■□□□□ 0.99
TOM1-203ENST00000404284 RNF123Q5XPI4 1314 aa21.24■□□□□ 0.99
TOM1-203ENST00000404284 ABCC2Q92887 1545 aa21.24■□□□□ 0.99
TOM1-203ENST00000404284 LRPPRCP42704 1394 aaKnown RBP21.24■□□□□ 0.99
TOM1-203ENST00000404284 KTN1Q86UP2 1357 aaKnown RBP21.24■□□□□ 0.99
TOM1-203ENST00000404284 A2MP01023 1474 aa21.23■□□□□ 0.99
TOM1-203ENST00000404284 ERCC6L2Q5T890 1561 aa21.23■□□□□ 0.99
TOM1-203ENST00000404284 TMC1Q8TDI8 760 aa21.23■□□□□ 0.99
TOM1-203ENST00000404284 BRD4O60885 1362 aaPredicted RBP21.22■□□□□ 0.99
TOM1-203ENST00000404284 GPRASP1Q5JY77 1395 aa21.22■□□□□ 0.99
TOM1-203ENST00000404284 MYBBP1AQ9BQG0 1328 aaKnown RBP21.21■□□□□ 0.99
TOM1-203ENST00000404284 LAMC1P11047 1609 aa21.21■□□□□ 0.99
TOM1-203ENST00000404284 PLEKHH2Q8IVE3 1493 aa21.21■□□□□ 0.99
TOM1-203ENST00000404284 MAGI2Q86UL8 1455 aa21.2■□□□□ 0.98
TOM1-203ENST00000404284 RALBP1Q15311 655 aa21.2■□□□□ 0.98
TOM1-203ENST00000404284 PRDM15P57071 1507 aaPredicted RBP21.18■□□□□ 0.98
TOM1-203ENST00000404284 DUOX2Q9NRD8 1548 aa21.18■□□□□ 0.98
TOM1-203ENST00000404284 DEKP35659 375 aaKnown RBP21.18■□□□□ 0.98
TOM1-203ENST00000404284 NBPF1Q3BBV0 1214 aa21.17■□□□□ 0.98
TOM1-203ENST00000404284 ATP10AO60312 1499 aa21.16■□□□□ 0.98
TOM1-203ENST00000404284 COL17A1Q9UMD9 1497 aaPredicted RBP21.16■□□□□ 0.98
TOM1-203ENST00000404284 RGL3Q3MIN7 710 aa21.16■□□□□ 0.98
TOM1-203ENST00000404284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.15■□□□□ 0.98
TOM1-203ENST00000404284 PARD3Q8TEW0 1356 aa21.15■□□□□ 0.98
TOM1-203ENST00000404284 EIF2AK4Q9P2K8 1649 aaKnown RBP21.14■□□□□ 0.98
TOM1-203ENST00000404284 ERBINQ96RT1 1412 aa21.14■□□□□ 0.98
TOM1-203ENST00000404284 SENP3-EIF4A1A0A087X0R7 540 aa21.14■□□□□ 0.97
TOM1-203ENST00000404284 PLCH2O75038 1416 aa21.11■□□□□ 0.97
TOM1-203ENST00000404284 ZCCHC11Q5TAX3 1644 aaKnown RBP21.11■□□□□ 0.97
TOM1-203ENST00000404284 ABCC1P33527 1531 aa21.1■□□□□ 0.97
TOM1-203ENST00000404284 PER1O15534 1290 aaPredicted RBP21.1■□□□□ 0.97
TOM1-203ENST00000404284 TESK2Q96S53 571 aa21.1■□□□□ 0.97
TOM1-203ENST00000404284 DISP3Q9P2K9 1392 aa21.1■□□□□ 0.97
TOM1-203ENST00000404284 RNF17Q9BXT8 1623 aaKnown RBP21.09■□□□□ 0.97
TOM1-203ENST00000404284 NLRP13Q86W25 1043 aa21.09■□□□□ 0.97
TOM1-203ENST00000404284 MYT1LQ9UL68 1186 aa21.06■□□□□ 0.96
TOM1-203ENST00000404284 UHRF1BP1LA0JNW5 1464 aa21.05■□□□□ 0.96
TOM1-203ENST00000404284 TRAPPC8Q9Y2L5 1435 aa21.04■□□□□ 0.96
TOM1-203ENST00000404284 SALL2Q9Y467 1007 aaPredicted RBP21.04■□□□□ 0.96
TOM1-203ENST00000404284 CLASP1Q7Z460 1538 aa21.04■□□□□ 0.96
TOM1-203ENST00000404284 WASHC2CQ9Y4E1 1318 aa21.02■□□□□ 0.96
TOM1-203ENST00000404284 EFCAB2Q5VUJ9 269 aa21.02■□□□□ 0.96
TOM1-203ENST00000404284 CCDC136Q96JN2 1154 aa21.02■□□□□ 0.96
TOM1-203ENST00000404284 MADDQ8WXG6 1647 aa21■□□□□ 0.95
TOM1-203ENST00000404284 ZMYM4Q5VZL5 1548 aa20.99■□□□□ 0.95
TOM1-203ENST00000404284 ZFYVE16Q7Z3T8 1539 aa20.98■□□□□ 0.95
TOM1-203ENST00000404284 TRPM2O94759 1503 aa20.97■□□□□ 0.95
TOM1-203ENST00000404284 IQGAP1P46940 1657 aa20.97■□□□□ 0.95
TOM1-203ENST00000404284 TMF1P82094 1093 aa20.97■□□□□ 0.95
TOM1-203ENST00000404284 PANK3Q9H999 370 aa20.97■□□□□ 0.95
TOM1-203ENST00000404284 INSRP06213 1382 aa20.97■□□□□ 0.95
TOM1-203ENST00000404284 RRP1P56182 461 aaKnown RBP20.97■□□□□ 0.95
TOM1-203ENST00000404284 ARAP3Q8WWN8 1544 aa20.97■□□□□ 0.95
TOM1-203ENST00000404284 BLMP54132 1417 aaPredicted RBP20.96■□□□□ 0.95
TOM1-203ENST00000404284 SPHKAPQ2M3C7 1700 aa20.96■□□□□ 0.95
TOM1-203ENST00000404284 CC2D1BQ5T0F9 858 aaKnown RBP20.96■□□□□ 0.95
TOM1-203ENST00000404284 RTEL1-TNFRSF6BF6WH68 1400 aa20.96■□□□□ 0.95
TOM1-203ENST00000404284 PDE3BQ13370 1112 aa20.95■□□□□ 0.94
TOM1-203ENST00000404284 DEPDC5O75140 1603 aa20.95■□□□□ 0.94
TOM1-203ENST00000404284 CEP152O94986 1710 aa20.95■□□□□ 0.94
TOM1-203ENST00000404284 RCAN3Q9UKA8 241 aa20.93■□□□□ 0.94
TOM1-203ENST00000404284 WDR7Q9Y4E6 1490 aa20.93■□□□□ 0.94
TOM1-203ENST00000404284 SPAG9O60271 1321 aaKnown RBP20.92■□□□□ 0.94
TOM1-203ENST00000404284 CLTCL1P53675 1640 aa20.92■□□□□ 0.94
TOM1-203ENST00000404284 PTPRTO14522 1441 aa20.92■□□□□ 0.94
TOM1-203ENST00000404284 TET3O43151 1660 aa20.9■□□□□ 0.94
TOM1-203ENST00000404284 AFAP1Q8N556 730 aa20.89■□□□□ 0.93
TOM1-203ENST00000404284 INO80Q9ULG1 1556 aaPredicted RBP20.88■□□□□ 0.93
TOM1-203ENST00000404284 CDCA7LQ96GN5 454 aa20.88■□□□□ 0.93
TOM1-203ENST00000404284 EXOC6Q8TAG9 804 aa20.88■□□□□ 0.93
TOM1-203ENST00000404284 VWDEQ8N2E2 1590 aa20.87■□□□□ 0.93
TOM1-203ENST00000404284 SCAPERQ9BY12 1400 aa20.87■□□□□ 0.93
TOM1-203ENST00000404284 NBR1Q14596 966 aa20.87■□□□□ 0.93
TOM1-203ENST00000404284 ABCA9Q8IUA7 1624 aa20.87■□□□□ 0.93
TOM1-203ENST00000404284 SYNMO15061 1565 aa20.86■□□□□ 0.93
TOM1-203ENST00000404284 SCAF11Q99590 1463 aaKnown RBP20.86■□□□□ 0.93
TOM1-203ENST00000404284 ATP7AQ04656 1500 aa20.86■□□□□ 0.93
TOM1-203ENST00000404284 MYOM1P52179 1685 aa20.83■□□□□ 0.93
TOM1-203ENST00000404284 STAC3Q96MF2 364 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms