RNA–Protein interactions for RNA: ENST00000403810.5

TSC1-202, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene TSC1, Length 1,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-202ENST00000403810 RRP7BPQ9NSQ0 103 aa22.37■■□□□ 1.17
TSC1-202ENST00000403810 GCC2Q8IWJ2 1684 aa22.36■■□□□ 1.17
TSC1-202ENST00000403810 DUOX2Q9NRD8 1548 aa22.36■■□□□ 1.17
TSC1-202ENST00000403810 ROCK1Q13464 1354 aa22.35■■□□□ 1.17
TSC1-202ENST00000403810 KDM4FA0A1W2PPD8 638 aa22.34■■□□□ 1.17
TSC1-202ENST00000403810 ADAMTSL3P82987 1691 aa22.33■■□□□ 1.16
TSC1-202ENST00000403810 MADDQ8WXG6 1647 aa22.32■■□□□ 1.16
TSC1-202ENST00000403810 ERBINQ96RT1 1412 aa22.31■■□□□ 1.16
TSC1-202ENST00000403810 EIF2AK4Q9P2K8 1649 aaKnown RBP22.29■■□□□ 1.16
TSC1-202ENST00000403810 KIF3BO15066 747 aa22.29■■□□□ 1.16
TSC1-202ENST00000403810 ANKRD50Q9ULJ7 1429 aa22.26■■□□□ 1.15
TSC1-202ENST00000403810 RNF17Q9BXT8 1623 aaKnown RBP22.26■■□□□ 1.15
TSC1-202ENST00000403810 FER1L4A9Z1Z3 1794 aa22.26■■□□□ 1.15
TSC1-202ENST00000403810 GGT6Q6P531 493 aa22.26■■□□□ 1.15
TSC1-202ENST00000403810 MROH1Q8NDA8 1641 aa22.24■■□□□ 1.15
TSC1-202ENST00000403810 RIMS1Q86UR5 1692 aaKnown RBP22.24■■□□□ 1.15
TSC1-202ENST00000403810 PRDM15P57071 1507 aaPredicted RBP22.2■■□□□ 1.14
TSC1-202ENST00000403810 PTPRMP28827 1452 aa22.19■■□□□ 1.14
TSC1-202ENST00000403810 DEPDC5O75140 1603 aa22.19■■□□□ 1.14
TSC1-202ENST00000403810 SIN3AQ96ST3 1273 aa22.19■■□□□ 1.14
TSC1-202ENST00000403810 KDM5DQ9BY66 1539 aa22.18■■□□□ 1.14
TSC1-202ENST00000403810 NEUROD1Q13562 356 aa22.17■■□□□ 1.14
TSC1-202ENST00000403810 CLTCQ00610 1675 aaKnown RBP22.17■■□□□ 1.14
TSC1-202ENST00000403810 ABCC3O15438 1527 aa22.15■■□□□ 1.14
TSC1-202ENST00000403810 CNTLNQ9NXG0 1405 aa22.15■■□□□ 1.14
TSC1-202ENST00000403810 ESF1Q9H501 851 aaKnown RBP22.15■■□□□ 1.14
TSC1-202ENST00000403810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.14■■□□□ 1.131e-7■□□□□ 9.5
TSC1-202ENST00000403810 UNC13BO14795 1591 aa22.14■■□□□ 1.13
TSC1-202ENST00000403810 FAM135AQ9P2D6 1515 aa22.14■■□□□ 1.13
TSC1-202ENST00000403810 PLPPR3Q6T4P5 718 aa22.13■■□□□ 1.13
TSC1-202ENST00000403810 TONSLQ96HA7 1378 aa22.12■■□□□ 1.13
TSC1-202ENST00000403810 PPP1R15AO75807 674 aaPredicted RBP22.11■■□□□ 1.13
TSC1-202ENST00000403810 VWDEQ8N2E2 1590 aa22.11■■□□□ 1.13
TSC1-202ENST00000403810 MROH2AA6NES4 1674 aa22.11■■□□□ 1.13
TSC1-202ENST00000403810 WASHC2CQ9Y4E1 1318 aa22.11■■□□□ 1.13
TSC1-202ENST00000403810 PPP6R1Q9UPN7 881 aa22.11■■□□□ 1.13
TSC1-202ENST00000403810 CEP152O94986 1710 aa22.1■■□□□ 1.13
TSC1-202ENST00000403810 ZC3H13Q5T200 1668 aaKnown RBP22.1■■□□□ 1.13
TSC1-202ENST00000403810 CEBPAP49715 358 aaPredicted RBP22.1■■□□□ 1.13
TSC1-202ENST00000403810 TRIM52Q96A61 297 aa22.1■■□□□ 1.13
TSC1-202ENST00000403810 C3P01024 1663 aa22.09■■□□□ 1.13
TSC1-202ENST00000403810 KANK1Q14678 1352 aa22.08■■□□□ 1.13
TSC1-202ENST00000403810 MPHOSPH9Q99550 1183 aa22.07■■□□□ 1.12
TSC1-202ENST00000403810 ZMYM3Q14202 1370 aa22.07■■□□□ 1.12
TSC1-202ENST00000403810 CAMSAP1Q5T5Y3 1602 aa22.06■■□□□ 1.12
TSC1-202ENST00000403810 LMTK2Q8IWU2 1503 aa22.05■■□□□ 1.12
TSC1-202ENST00000403810 NUP155O75694 1391 aa22.03■■□□□ 1.12
TSC1-202ENST00000403810 IQGAP3Q86VI3 1631 aa22.03■■□□□ 1.12
TSC1-202ENST00000403810 PZPP20742 1482 aa22.03■■□□□ 1.12
TSC1-202ENST00000403810 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
TSC1-202ENST00000403810 EFCAB6Q5THR3 1501 aa22.02■■□□□ 1.12
TSC1-202ENST00000403810 NPATQ14207 1427 aa22■■□□□ 1.11
TSC1-202ENST00000403810 TET3O43151 1660 aa21.98■■□□□ 1.11
TSC1-202ENST00000403810 MIER1Q8N108 512 aa21.98■■□□□ 1.11
TSC1-202ENST00000403810 FBXO31Q5XUX0 539 aaPredicted RBP21.97■■□□□ 1.11
TSC1-202ENST00000403810 ARHGAP31Q2M1Z3 1444 aa21.97■■□□□ 1.11
TSC1-202ENST00000403810 ERVK-7P63135 1459 aa21.96■■□□□ 1.11
TSC1-202ENST00000403810 ANKRD30BQ9BXX2 1392 aa21.96■■□□□ 1.11
TSC1-202ENST00000403810 CENPBP07199 599 aaPredicted RBP21.95■■□□□ 1.1
TSC1-202ENST00000403810 SPATA31D1Q6ZQQ2 1576 aa21.94■■□□□ 1.1
TSC1-202ENST00000403810 SLC4A1APQ9BWU0 796 aaKnown RBP21.93■■□□□ 1.1
TSC1-202ENST00000403810 E9PCH4 1651 aa21.92■■□□□ 1.1
TSC1-202ENST00000403810 PREX1Q8TCU6 1659 aa21.92■■□□□ 1.1
TSC1-202ENST00000403810 RPRD2Q5VT52 1461 aaKnown RBP21.91■■□□□ 1.1
TSC1-202ENST00000403810 MYO3AQ8NEV4 1616 aa21.91■■□□□ 1.1
TSC1-202ENST00000403810 TNRQ92752 1358 aa21.91■■□□□ 1.1
TSC1-202ENST00000403810 LMTK3Q96Q04 1460 aa21.89■■□□□ 1.09
TSC1-202ENST00000403810 UHRF1BP1Q6BDS2 1440 aa21.88■■□□□ 1.09
TSC1-202ENST00000403810 SYNMO15061 1565 aa21.87■■□□□ 1.09
TSC1-202ENST00000403810 NOS1P29475 1434 aa21.87■■□□□ 1.09
TSC1-202ENST00000403810 CEP170BQ9Y4F5 1589 aaPredicted RBP21.84■■□□□ 1.09
TSC1-202ENST00000403810 CFAP65Q6ZU64 1925 aaKnown RBP21.84■■□□□ 1.09
TSC1-202ENST00000403810 PKD2Q13563 968 aa21.83■■□□□ 1.09
TSC1-202ENST00000403810 ZNF142P52746 1687 aaPredicted RBP21.83■■□□□ 1.08
TSC1-202ENST00000403810 UGGT1Q9NYU2 1555 aa21.82■■□□□ 1.08
TSC1-202ENST00000403810 NLRP1Q9C000 1473 aa21.81■■□□□ 1.08
TSC1-202ENST00000403810 FOXD1Q16676 465 aa21.8■■□□□ 1.08
TSC1-202ENST00000403810 SETD1BQ9UPS6 1966 aaKnown RBP21.8■■□□□ 1.08
TSC1-202ENST00000403810 A2ML1A8K2U0 1454 aa21.8■■□□□ 1.08
TSC1-202ENST00000403810 HSPA2P54652 639 aa21.79■■□□□ 1.08
TSC1-202ENST00000403810 L3MBTL2Q969R5 705 aa21.79■■□□□ 1.08
TSC1-202ENST00000403810 SPHKAPQ2M3C7 1700 aa21.78■■□□□ 1.08
TSC1-202ENST00000403810 PTPRTO14522 1441 aa21.78■■□□□ 1.08
TSC1-202ENST00000403810 PLA2R1Q13018 1463 aa21.77■■□□□ 1.08
TSC1-202ENST00000403810 TRPM2O94759 1503 aa21.76■■□□□ 1.07
TSC1-202ENST00000403810 PIK3C2BO00750 1634 aa21.76■■□□□ 1.07
TSC1-202ENST00000403810 IDI1Q13907 227 aa21.73■■□□□ 1.07
TSC1-202ENST00000403810 CLTCL1P53675 1640 aa21.72■■□□□ 1.07
TSC1-202ENST00000403810 ADGRB3O60242 1522 aa21.72■■□□□ 1.07
TSC1-202ENST00000403810 UBR1Q8IWV7 1749 aa21.71■■□□□ 1.07
TSC1-202ENST00000403810 SLC52A1Q9NWF4 448 aa21.7■■□□□ 1.06
TSC1-202ENST00000403810 EIF4G2P78344 907 aaKnown RBP eCLIP21.69■■□□□ 1.06
TSC1-202ENST00000403810 DDX10Q13206 875 aaKnown RBP21.68■■□□□ 1.06
TSC1-202ENST00000403810 TMEM131LA2VDJ0 1609 aa21.65■■□□□ 1.06
TSC1-202ENST00000403810 STAG3Q9UJ98 1225 aa21.65■■□□□ 1.06
TSC1-202ENST00000403810 CCDC144AA2RUR9 1427 aa21.64■■□□□ 1.05
TSC1-202ENST00000403810 KDM5AP29375 1690 aaKnown RBP21.64■■□□□ 1.05
TSC1-202ENST00000403810 CHGAP10645 457 aaKnown RBP21.63■■□□□ 1.05
TSC1-202ENST00000403810 HSPA5P11021 654 aaKnown RBP21.63■■□□□ 1.05
TSC1-202ENST00000403810 YTHDC1Q96MU7 727 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms