RNA–Protein interactions for RNA: ENST00000403810.5

TSC1-202, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene TSC1, Length 1,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-202ENST00000403810 NISCHQ9Y2I1 1504 aa35.3■■■■□ 3.24
TSC1-202ENST00000403810 CCDC180Q9P1Z9 1646 aa31.23■■■□□ 2.59
TSC1-202ENST00000403810 ABCC9O60706 1549 aa30.36■■■□□ 2.45
TSC1-202ENST00000403810 ZCCHC6Q5VYS8 1495 aaKnown RBP29.51■■■□□ 2.31
TSC1-202ENST00000403810 DCAF8L2P0C7V8 631 aa29.35■■■□□ 2.29
TSC1-202ENST00000403810 NACADO15069 1562 aa29.28■■■□□ 2.28
TSC1-202ENST00000403810 RB1CC1Q8TDY2 1594 aa29.26■■■□□ 2.27
TSC1-202ENST00000403810 MYO15BQ96JP2 1530 aa29.18■■■□□ 2.26
TSC1-202ENST00000403810 DCAF1Q9Y4B6 1507 aa29.18■■■□□ 2.26
TSC1-202ENST00000403810 UNC13AQ9UPW8 1703 aa28.61■■■□□ 2.17
TSC1-202ENST00000403810 SCRIBQ14160 1630 aa28.61■■■□□ 2.17
TSC1-202ENST00000403810 BICRAQ9NZM4 1560 aa28.42■■■□□ 2.14
TSC1-202ENST00000403810 PABPN1Q86U42 306 aaKnown RBP eCLIP28.4■■■□□ 2.14
TSC1-202ENST00000403810 SHROOM4Q9ULL8 1493 aa28.13■■■□□ 2.09
TSC1-202ENST00000403810 EIF4G1Q04637 1599 aaKnown RBP27.64■■■□□ 2.02
TSC1-202ENST00000403810 DNAJC5BQ9UF47 199 aa27.59■■■□□ 2.01
TSC1-202ENST00000403810 CECR2Q9BXF3 1484 aa27.51■■□□□ 1.99
TSC1-202ENST00000403810 CC2D2AQ9P2K1 1620 aa27.45■■□□□ 1.98
TSC1-202ENST00000403810 SMARCA4P51532 1647 aa27.35■■□□□ 1.97
TSC1-202ENST00000403810 BAZ1AQ9NRL2 1556 aaPredicted RBP27.33■■□□□ 1.97
TSC1-202ENST00000403810 MROH2BQ7Z745 1585 aa27.25■■□□□ 1.95
TSC1-202ENST00000403810 ATAD2BQ9ULI0 1458 aa27.12■■□□□ 1.93
TSC1-202ENST00000403810 SMARCA2P51531 1590 aa27.07■■□□□ 1.92
TSC1-202ENST00000403810 PEG3Q9GZU2 1588 aa27.05■■□□□ 1.92
TSC1-202ENST00000403810 NCAPD3P42695 1498 aa27.02■■□□□ 1.92
TSC1-202ENST00000403810 RSF1Q96T23 1441 aaPredicted RBP27.01■■□□□ 1.91
TSC1-202ENST00000403810 WIZO95785 1651 aa26.95■■□□□ 1.91
TSC1-202ENST00000403810 HMGXB3Q12766 1538 aa26.95■■□□□ 1.9
TSC1-202ENST00000403810 SUPT5HO00267 1087 aaKnown RBP26.92■■□□□ 1.9
TSC1-202ENST00000403810 BAZ1BQ9UIG0 1483 aaKnown RBP26.91■■□□□ 1.9
TSC1-202ENST00000403810 TOP2AP11388 1531 aaKnown RBP26.69■■□□□ 1.86
TSC1-202ENST00000403810 NESP48681 1621 aa26.37■■□□□ 1.81
TSC1-202ENST00000403810 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
TSC1-202ENST00000403810 LAMC3Q9Y6N6 1575 aa26.27■■□□□ 1.8
TSC1-202ENST00000403810 CADPSQ9ULU8 1353 aa26.26■■□□□ 1.79
TSC1-202ENST00000403810 CFTRP13569 1480 aa26.18■■□□□ 1.78
TSC1-202ENST00000403810 ERCC6Q03468 1493 aa26.12■■□□□ 1.77
TSC1-202ENST00000403810 PDS5BQ9NTI5 1447 aa26.07■■□□□ 1.76
TSC1-202ENST00000403810 CHIC1Q5VXU3 224 aa26.06■■□□□ 1.76
TSC1-202ENST00000403810 KIF21AQ7Z4S6 1674 aa26.04■■□□□ 1.76
TSC1-202ENST00000403810 FANCD2Q9BXW9 1451 aa26■■□□□ 1.75
TSC1-202ENST00000403810 PRDM2Q13029 1718 aa25.97■■□□□ 1.75
TSC1-202ENST00000403810 CEP164Q9UPV0 1460 aa25.93■■□□□ 1.74
TSC1-202ENST00000403810 THOC2Q8NI27 1593 aaKnown RBP25.9■■□□□ 1.74
TSC1-202ENST00000403810 MRC2Q9UBG0 1479 aa25.84■■□□□ 1.73
TSC1-202ENST00000403810 WDR62O43379 1518 aa25.75■■□□□ 1.71
TSC1-202ENST00000403810 URB2Q14146 1524 aaKnown RBP25.74■■□□□ 1.71
TSC1-202ENST00000403810 CUX2O14529 1486 aa25.71■■□□□ 1.71
TSC1-202ENST00000403810 TOPBP1Q92547 1522 aa25.61■■□□□ 1.69
TSC1-202ENST00000403810 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
TSC1-202ENST00000403810 CUX1P39880 1505 aa25.55■■□□□ 1.68
TSC1-202ENST00000403810 ABCC8Q09428 1581 aa25.54■■□□□ 1.68
TSC1-202ENST00000403810 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
TSC1-202ENST00000403810 POLA1P09884 1462 aaPredicted RBP25.43■■□□□ 1.66
TSC1-202ENST00000403810 SYNJ1O43426 1573 aa25.43■■□□□ 1.66
TSC1-202ENST00000403810 FGD5Q6ZNL6 1462 aa25.41■■□□□ 1.66
TSC1-202ENST00000403810 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
TSC1-202ENST00000403810 BIVM-ERCC5R4GMW8 1640 aa25.36■■□□□ 1.65
TSC1-202ENST00000403810 IFT140Q96RY7 1462 aa25.35■■□□□ 1.65
TSC1-202ENST00000403810 TRIM41Q8WV44 630 aa25.34■■□□□ 1.65
TSC1-202ENST00000403810 RAD54L2Q9Y4B4 1467 aa25.32■■□□□ 1.64
TSC1-202ENST00000403810 TARBP1Q13395 1621 aaKnown RBP25.31■■□□□ 1.64
TSC1-202ENST00000403810 SOGA1O94964 1423 aa25.28■■□□□ 1.64
TSC1-202ENST00000403810 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
TSC1-202ENST00000403810 EIF4G3O43432 1585 aaKnown RBP25.19■■□□□ 1.62
TSC1-202ENST00000403810 WDR97A6NE52 1622 aa25.18■■□□□ 1.62
TSC1-202ENST00000403810 ABCA10Q8WWZ4 1543 aa25.15■■□□□ 1.62
TSC1-202ENST00000403810 AQRO60306 1485 aaKnown RBP eCLIP25.14■■□□□ 1.622e-6■■□□□ 11.4
TSC1-202ENST00000403810 TDRD9Q8NDG6 1382 aaKnown RBP25.14■■□□□ 1.62
TSC1-202ENST00000403810 ABCA5Q8WWZ7 1642 aa25.05■■□□□ 1.6
TSC1-202ENST00000403810 LOC105371045A0A1W2PR82 267 aa25.02■■□□□ 1.6
TSC1-202ENST00000403810 GAPVD1Q14C86 1478 aa25.01■■□□□ 1.59
TSC1-202ENST00000403810 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
TSC1-202ENST00000403810 PBRM1Q86U86 1689 aa24.95■■□□□ 1.58
TSC1-202ENST00000403810 SNAPC4Q5SXM2 1469 aa24.94■■□□□ 1.58
TSC1-202ENST00000403810 KIF27Q86VH2 1401 aa24.88■■□□□ 1.57
TSC1-202ENST00000403810 MAGI1Q96QZ7 1491 aaPredicted RBP24.86■■□□□ 1.57
TSC1-202ENST00000403810 ERICH3Q5RHP9 1530 aa24.84■■□□□ 1.57
TSC1-202ENST00000403810 RUSC2Q8N2Y8 1516 aa24.81■■□□□ 1.56
TSC1-202ENST00000403810 ADAMTS12P58397 1594 aa24.81■■□□□ 1.56
TSC1-202ENST00000403810 FAM9AQ8IZU1 332 aaPredicted RBP24.8■■□□□ 1.56
TSC1-202ENST00000403810 SYNJ2O15056 1496 aa24.77■■□□□ 1.56
TSC1-202ENST00000403810 CHD1O14646 1710 aa24.77■■□□□ 1.56
TSC1-202ENST00000403810 FBLN2P98095 1184 aa24.76■■□□□ 1.55
TSC1-202ENST00000403810 IGF1RP08069 1367 aa24.74■■□□□ 1.55
TSC1-202ENST00000403810 EEA1Q15075 1411 aa24.74■■□□□ 1.55
TSC1-202ENST00000403810 FHAD1B1AJZ9 1412 aa24.72■■□□□ 1.55
TSC1-202ENST00000403810 CHMP7Q8WUX9 453 aaPredicted RBP24.7■■□□□ 1.54
TSC1-202ENST00000403810 GRIN2AQ12879 1464 aa24.67■■□□□ 1.54
TSC1-202ENST00000403810 CUL7Q14999 1698 aa24.66■■□□□ 1.54
TSC1-202ENST00000403810 OSCARQ8IYS5 282 aa24.64■■□□□ 1.53
TSC1-202ENST00000403810 CARMIL1Q5VZK9 1371 aa24.6■■□□□ 1.53
TSC1-202ENST00000403810 CEP170Q5SW79 1584 aa24.55■■□□□ 1.52
TSC1-202ENST00000403810 DNAJC5Q9H3Z4 198 aa24.55■■□□□ 1.52
TSC1-202ENST00000403810 NUP160Q12769 1436 aa24.54■■□□□ 1.52
TSC1-202ENST00000403810 CLASP1Q7Z460 1538 aa24.54■■□□□ 1.52
TSC1-202ENST00000403810 PRXQ9BXM0 1461 aa24.5■■□□□ 1.51
TSC1-202ENST00000403810 RAPGEF2Q9Y4G8 1499 aa24.49■■□□□ 1.51
TSC1-202ENST00000403810 CSRNP3Q8WYN3 585 aa24.49■■□□□ 1.51
TSC1-202ENST00000403810 PCGF6Q9BYE7 350 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms