RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 RTEL1-TNFRSF6BF6WH68 1400 aa22.3■■□□□ 1.16
PDGFA-203ENST00000402802 FANCIQ9NVI1 1328 aa22.3■■□□□ 1.16
PDGFA-203ENST00000402802 INO80Q9ULG1 1556 aaPredicted RBP22.29■■□□□ 1.16
PDGFA-203ENST00000402802 KDM5DQ9BY66 1539 aa22.29■■□□□ 1.16
PDGFA-203ENST00000402802 FAM135AQ9P2D6 1515 aa22.28■■□□□ 1.16
PDGFA-203ENST00000402802 ERBINQ96RT1 1412 aa22.27■■□□□ 1.16
PDGFA-203ENST00000402802 MAP3K4Q9Y6R4 1608 aa22.27■■□□□ 1.16
PDGFA-203ENST00000402802 DIP2BQ9P265 1576 aa22.27■■□□□ 1.16
PDGFA-203ENST00000402802 L3MBTL2Q969R5 705 aa22.26■■□□□ 1.15
PDGFA-203ENST00000402802 POGZQ7Z3K3 1410 aa22.26■■□□□ 1.15
PDGFA-203ENST00000402802 ZNF518AQ6AHZ1 1483 aa22.26■■□□□ 1.15
PDGFA-203ENST00000402802 CFAP74Q9C0B2 1584 aa22.25■■□□□ 1.15
PDGFA-203ENST00000402802 UNC13BO14795 1591 aa22.25■■□□□ 1.15
PDGFA-203ENST00000402802 RPRD2Q5VT52 1461 aaKnown RBP22.24■■□□□ 1.15
PDGFA-203ENST00000402802 KIDINS220Q9ULH0 1771 aa22.23■■□□□ 1.15
PDGFA-203ENST00000402802 TSPOAP1O95153 1857 aa22.23■■□□□ 1.15
PDGFA-203ENST00000402802 GLI2P10070 1586 aa22.22■■□□□ 1.15
PDGFA-203ENST00000402802 HIRIP3Q9BW71 556 aaPredicted RBP22.22■■□□□ 1.15
PDGFA-203ENST00000402802 NEO1Q92859 1461 aa22.22■■□□□ 1.15
PDGFA-203ENST00000402802 KIF3BO15066 747 aa22.21■■□□□ 1.15
PDGFA-203ENST00000402802 KDM5CP41229 1560 aa22.18■■□□□ 1.14
PDGFA-203ENST00000402802 DHX29Q7Z478 1369 aaKnown RBP22.17■■□□□ 1.14
PDGFA-203ENST00000402802 MAGI2Q86UL8 1455 aa22.17■■□□□ 1.14
PDGFA-203ENST00000402802 TEX14Q8IWB6 1497 aa22.17■■□□□ 1.14
PDGFA-203ENST00000402802 IQGAP3Q86VI3 1631 aa22.16■■□□□ 1.14
PDGFA-203ENST00000402802 HECW2Q9P2P5 1572 aa22.14■■□□□ 1.13
PDGFA-203ENST00000402802 CCER2I3L3R5 266 aa22.13■■□□□ 1.13
PDGFA-203ENST00000402802 PPRC1Q5VV67 1664 aaKnown RBP22.13■■□□□ 1.13
PDGFA-203ENST00000402802 MLH3Q9UHC1 1453 aa22.13■■□□□ 1.13
PDGFA-203ENST00000402802 NBPF8Q3BBV2 869 aa22.12■■□□□ 1.13
PDGFA-203ENST00000402802 A2MP01023 1474 aa22.12■■□□□ 1.13
PDGFA-203ENST00000402802 PLA2R1Q13018 1463 aa22.11■■□□□ 1.13
PDGFA-203ENST00000402802 ABCA6Q8N139 1617 aa22.11■■□□□ 1.13
PDGFA-203ENST00000402802 FRMPD1Q5SYB0 1578 aa22.1■■□□□ 1.13
PDGFA-203ENST00000402802 RICTORQ6R327 1708 aa22.1■■□□□ 1.13
PDGFA-203ENST00000402802 ZNF326Q5BKZ1 582 aaKnown RBP22.09■■□□□ 1.13
PDGFA-203ENST00000402802 YEATS2Q9ULM3 1422 aa22.09■■□□□ 1.13
PDGFA-203ENST00000402802 KIF13AQ9H1H9 1805 aa22.09■■□□□ 1.13
PDGFA-203ENST00000402802 DEPDC5O75140 1603 aa22.08■■□□□ 1.12
PDGFA-203ENST00000402802 GGT6Q6P531 493 aa22.07■■□□□ 1.12
PDGFA-203ENST00000402802 MROH1Q8NDA8 1641 aa22.07■■□□□ 1.12
PDGFA-203ENST00000402802 DDX10Q13206 875 aaKnown RBP22.07■■□□□ 1.12
PDGFA-203ENST00000402802 CCDC144AA2RUR9 1427 aa22.05■■□□□ 1.12
PDGFA-203ENST00000402802 RGL3Q3MIN7 710 aa22.05■■□□□ 1.12
PDGFA-203ENST00000402802 KDM2AQ9Y2K7 1162 aa22.05■■□□□ 1.12
PDGFA-203ENST00000402802 KANK1Q14678 1352 aa22.04■■□□□ 1.12
PDGFA-203ENST00000402802 EIF2AK4Q9P2K8 1649 aaKnown RBP22.04■■□□□ 1.12
PDGFA-203ENST00000402802 DIP2CQ9Y2E4 1556 aa22.04■■□□□ 1.12
PDGFA-203ENST00000402802 E9PCH4 1651 aa22.04■■□□□ 1.12
PDGFA-203ENST00000402802 PRDM15P57071 1507 aaPredicted RBP22.02■■□□□ 1.12
PDGFA-203ENST00000402802 VWDEQ8N2E2 1590 aa22.01■■□□□ 1.11
PDGFA-203ENST00000402802 DCAF11Q8TEB1 546 aa22■■□□□ 1.11
PDGFA-203ENST00000402802 COL17A1Q9UMD9 1497 aaPredicted RBP22■■□□□ 1.11
PDGFA-203ENST00000402802 DEKP35659 375 aaKnown RBP22■■□□□ 1.11
PDGFA-203ENST00000402802 ATP10AO60312 1499 aa21.98■■□□□ 1.11
PDGFA-203ENST00000402802 HSPA5P11021 654 aaKnown RBP21.97■■□□□ 1.11
PDGFA-203ENST00000402802 TET3O43151 1660 aa21.97■■□□□ 1.11
PDGFA-203ENST00000402802 ANP32CO43423 234 aa21.96■■□□□ 1.11
PDGFA-203ENST00000402802 CEP152O94986 1710 aa21.96■■□□□ 1.11
PDGFA-203ENST00000402802 RNF17Q9BXT8 1623 aaKnown RBP21.95■■□□□ 1.1
PDGFA-203ENST00000402802 WASHC2CQ9Y4E1 1318 aa21.92■■□□□ 1.1
PDGFA-203ENST00000402802 ZMYM4Q5VZL5 1548 aa21.92■■□□□ 1.1
PDGFA-203ENST00000402802 ERICH6BQ5W0A0 696 aa21.91■■□□□ 1.1
PDGFA-203ENST00000402802 UGGT1Q9NYU2 1555 aa21.91■■□□□ 1.1
PDGFA-203ENST00000402802 EIF4G2P78344 907 aaKnown RBP eCLIP21.9■■□□□ 1.1
PDGFA-203ENST00000402802 EFCAB6Q5THR3 1501 aa21.9■■□□□ 1.1
PDGFA-203ENST00000402802 SPHKAPQ2M3C7 1700 aa21.9■■□□□ 1.1
PDGFA-203ENST00000402802 PTPRTO14522 1441 aa21.9■■□□□ 1.1
PDGFA-203ENST00000402802 TRHP20396 242 aaPredicted RBP21.89■■□□□ 1.1
PDGFA-203ENST00000402802 TRPM2O94759 1503 aa21.89■■□□□ 1.09
PDGFA-203ENST00000402802 CLTCL1P53675 1640 aa21.88■■□□□ 1.09
PDGFA-203ENST00000402802 CFAP65Q6ZU64 1925 aaKnown RBP21.88■■□□□ 1.09
PDGFA-203ENST00000402802 ABCC3O15438 1527 aa21.87■■□□□ 1.09
PDGFA-203ENST00000402802 BCORL1Q5H9F3 1711 aa21.86■■□□□ 1.09
PDGFA-203ENST00000402802 NPATQ14207 1427 aa21.86■■□□□ 1.09
PDGFA-203ENST00000402802 UHRF1BP1Q6BDS2 1440 aa21.86■■□□□ 1.09
PDGFA-203ENST00000402802 LMTK2Q8IWU2 1503 aa21.86■■□□□ 1.09
PDGFA-203ENST00000402802 SPATA31E1Q6ZUB1 1445 aa21.84■■□□□ 1.09
PDGFA-203ENST00000402802 MLECQ14165 292 aa21.84■■□□□ 1.09
PDGFA-203ENST00000402802 SIGLEC1Q9BZZ2 1709 aa21.83■■□□□ 1.09
PDGFA-203ENST00000402802 C11orf95C9JLR9 678 aaPredicted RBP21.82■■□□□ 1.08
PDGFA-203ENST00000402802 PRAG1Q86YV5 1406 aa21.81■■□□□ 1.08
PDGFA-203ENST00000402802 NBPF1Q3BBV0 1214 aa21.8■■□□□ 1.08
PDGFA-203ENST00000402802 CARD11Q9BXL7 1154 aa21.8■■□□□ 1.08
PDGFA-203ENST00000402802 RALGAPBQ86X10 1494 aa21.8■■□□□ 1.08
PDGFA-203ENST00000402802 WASHC2AQ641Q2 1341 aa21.79■■□□□ 1.08
PDGFA-203ENST00000402802 USP47Q96K76 1375 aa21.79■■□□□ 1.08
PDGFA-203ENST00000402802 CHGAP10645 457 aaKnown RBP21.79■■□□□ 1.08
PDGFA-203ENST00000402802 DNAJC5Q9H3Z4 198 aa21.79■■□□□ 1.08
PDGFA-203ENST00000402802 PPP4R2Q9NY27 417 aa21.79■■□□□ 1.08
PDGFA-203ENST00000402802 CAMSAP1Q5T5Y3 1602 aa21.78■■□□□ 1.08
PDGFA-203ENST00000402802 ROCK2O75116 1388 aaKnown RBP21.77■■□□□ 1.08
PDGFA-203ENST00000402802 ARHGEF40Q8TER5 1519 aa21.75■■□□□ 1.07
PDGFA-203ENST00000402802 NOP58Q9Y2X3 529 aaKnown RBP21.74■■□□□ 1.07
PDGFA-203ENST00000402802 ANO8Q9HCE9 1232 aaPredicted RBP21.73■■□□□ 1.07
PDGFA-203ENST00000402802 TRPM1Q7Z4N2 1603 aa21.72■■□□□ 1.07
PDGFA-203ENST00000402802 IRX6P78412 446 aaPredicted RBP21.72■■□□□ 1.07
PDGFA-203ENST00000402802 FBXO31Q5XUX0 539 aaPredicted RBP21.72■■□□□ 1.07
PDGFA-203ENST00000402802 MROH2AA6NES4 1674 aa21.72■■□□□ 1.07
PDGFA-203ENST00000402802 HNRNPUQ00839 825 aaKnown RBP eCLIP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms