RNA–Protein interactions for RNA: ENST00000401669.6

NRXN1-204, Transcript of neurexin 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NRXN1, Length 5,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-204ENST00000401669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.97■□□□□ 0.79
NRXN1-204ENST00000401669 CNKSR2Q8WXI2 1034 aa19.97■□□□□ 0.79
NRXN1-204ENST00000401669 USP35Q9P2H5 1018 aa19.96■□□□□ 0.79
NRXN1-204ENST00000401669 TNNT3P45378 269 aaPredicted RBP19.96■□□□□ 0.79
NRXN1-204ENST00000401669 RALBP1Q15311 655 aa19.96■□□□□ 0.79
NRXN1-204ENST00000401669 CARMIL2Q6F5E8 1435 aa19.96■□□□□ 0.79
NRXN1-204ENST00000401669 CLUAP1Q96AJ1 413 aa19.96■□□□□ 0.79
NRXN1-204ENST00000401669 TCERG1O14776 1098 aaKnown RBP19.95■□□□□ 0.78
NRXN1-204ENST00000401669 NOL10Q9BSC4 688 aaKnown RBP19.95■□□□□ 0.78
NRXN1-204ENST00000401669 CARMIL1Q5VZK9 1371 aa19.95■□□□□ 0.78
NRXN1-204ENST00000401669 TIMELESSQ9UNS1 1208 aa19.94■□□□□ 0.78
NRXN1-204ENST00000401669 NUP155O75694 1391 aa19.94■□□□□ 0.78
NRXN1-204ENST00000401669 FOXD4L1Q9NU39 408 aa19.94■□□□□ 0.78
NRXN1-204ENST00000401669 TSR1Q2NL82 804 aaKnown RBP19.93■□□□□ 0.78
NRXN1-204ENST00000401669 AMOTL1Q8IY63 956 aa19.93■□□□□ 0.78
NRXN1-204ENST00000401669 WASHC2CQ9Y4E1 1318 aa19.93■□□□□ 0.78
NRXN1-204ENST00000401669 CCER2I3L3R5 266 aa19.93■□□□□ 0.78
NRXN1-204ENST00000401669 C1orf141Q5JVX7 400 aa19.92■□□□□ 0.78
NRXN1-204ENST00000401669 H3BQV1 296 aa19.92■□□□□ 0.78
NRXN1-204ENST00000401669 IFFO2Q5TF58 517 aa19.92■□□□□ 0.78
NRXN1-204ENST00000401669 FBXO3Q9UK99 471 aa19.91■□□□□ 0.78
NRXN1-204ENST00000401669 CCDC146Q8IYE0 955 aa19.91■□□□□ 0.78
NRXN1-204ENST00000401669 CWC22Q9HCG8 908 aaKnown RBP19.91■□□□□ 0.78
NRXN1-204ENST00000401669 MYO15BQ96JP2 1530 aa19.9■□□□□ 0.78
NRXN1-204ENST00000401669 MEX3CQ5U5Q3 659 aaKnown RBP19.9■□□□□ 0.78
NRXN1-204ENST00000401669 SYNE3Q6ZMZ3 975 aa19.9■□□□□ 0.78
NRXN1-204ENST00000401669 ST18O60284 1047 aa19.9■□□□□ 0.78
NRXN1-204ENST00000401669 TPM2P07951 284 aa19.9■□□□□ 0.78
NRXN1-204ENST00000401669 DEKP35659 375 aaKnown RBP19.89■□□□□ 0.78
NRXN1-204ENST00000401669 FAM184AQ8NB25 1140 aa19.89■□□□□ 0.77
NRXN1-204ENST00000401669 FOXD4L5Q5VV16 416 aaPredicted RBP19.88■□□□□ 0.77
NRXN1-204ENST00000401669 FOXD4L4Q8WXT5 416 aaPredicted RBP19.88■□□□□ 0.77
NRXN1-204ENST00000401669 CUX2O14529 1486 aa19.88■□□□□ 0.77
NRXN1-204ENST00000401669 KLHL34Q8N239 644 aa19.87■□□□□ 0.77
NRXN1-204ENST00000401669 AEBP2Q6ZN18 517 aaPredicted RBP19.87■□□□□ 0.77
NRXN1-204ENST00000401669 PHF14O94880 888 aa19.87■□□□□ 0.77
NRXN1-204ENST00000401669 CENPJQ9HC77 1338 aaPredicted RBP19.87■□□□□ 0.77
NRXN1-204ENST00000401669 GOLGA6L3A6NEY3 463 aa19.87■□□□□ 0.77
NRXN1-204ENST00000401669 FBXW7Q969H0 707 aa19.87■□□□□ 0.77
NRXN1-204ENST00000401669 RILPL2Q969X0 211 aa19.86■□□□□ 0.77
NRXN1-204ENST00000401669 CHMP4CQ96CF2 233 aa19.86■□□□□ 0.77
NRXN1-204ENST00000401669 NGEFQ8N5V2 710 aa19.86■□□□□ 0.77
NRXN1-204ENST00000401669 BAZ1AQ9NRL2 1556 aaPredicted RBP19.86■□□□□ 0.77
NRXN1-204ENST00000401669 TTC5Q8N0Z6 440 aa19.86■□□□□ 0.77
NRXN1-204ENST00000401669 ANKRD30AQ9BXX3 1397 aa19.85■□□□□ 0.77
NRXN1-204ENST00000401669 ARHGAP35Q9NRY4 1499 aa19.85■□□□□ 0.77
NRXN1-204ENST00000401669 DHX16O60231 1041 aaKnown RBP19.85■□□□□ 0.77
NRXN1-204ENST00000401669 SETD5Q9C0A6 1442 aa19.84■□□□□ 0.77
NRXN1-204ENST00000401669 TEFQ10587 303 aa19.84■□□□□ 0.77
NRXN1-204ENST00000401669 TPM1P09493 284 aa19.84■□□□□ 0.77
NRXN1-204ENST00000401669 LRRFIP1Q32MZ4 808 aaKnown RBP19.83■□□□□ 0.77
NRXN1-204ENST00000401669 MPHOSPH9Q99550 1183 aa19.83■□□□□ 0.77
NRXN1-204ENST00000401669 SYTL4Q96C24 671 aaPredicted RBP19.83■□□□□ 0.77
NRXN1-204ENST00000401669 NEXNQ0ZGT2 675 aa19.82■□□□□ 0.76
NRXN1-204ENST00000401669 CPLX2Q6PUV4 134 aaKnown RBP19.82■□□□□ 0.76
NRXN1-204ENST00000401669 VPS37DQ86XT2 251 aa19.82■□□□□ 0.76
NRXN1-204ENST00000401669 TRAK1Q9UPV9 953 aa19.82■□□□□ 0.76
NRXN1-204ENST00000401669 CCAR2Q8N163 923 aaKnown RBP19.81■□□□□ 0.76
NRXN1-204ENST00000401669 ELL2O00472 640 aaPredicted RBP19.8■□□□□ 0.76
NRXN1-204ENST00000401669 MCTP1Q6DN14 999 aa19.8■□□□□ 0.76
NRXN1-204ENST00000401669 PCMTD1Q96MG8 357 aaPredicted RBP19.79■□□□□ 0.76
NRXN1-204ENST00000401669 COG3Q96JB2 828 aa19.79■□□□□ 0.76
NRXN1-204ENST00000401669 GOLGA6L19H0YKK7 550 aa19.79■□□□□ 0.76
NRXN1-204ENST00000401669 HNRNPMP52272 730 aaKnown RBP eCLIP19.79■□□□□ 0.76
NRXN1-204ENST00000401669 TRIM29Q14134 588 aa19.79■□□□□ 0.76
NRXN1-204ENST00000401669 CCDC47Q96A33 483 aaKnown RBP19.79■□□□□ 0.76
NRXN1-204ENST00000401669 CCDC43Q96MW1 224 aaKnown RBP19.79■□□□□ 0.76
NRXN1-204ENST00000401669 PHF23Q9BUL5 403 aaPredicted RBP19.79■□□□□ 0.76
NRXN1-204ENST00000401669 BECN2A8MW95 431 aa19.78■□□□□ 0.76
NRXN1-204ENST00000401669 APPP05067 770 aa19.78■□□□□ 0.76
NRXN1-204ENST00000401669 DCAF8L1A6NGE4 600 aa19.77■□□□□ 0.76
NRXN1-204ENST00000401669 CCDC70Q6NSX1 233 aa19.77■□□□□ 0.76
NRXN1-204ENST00000401669 RRP7AQ9Y3A4 280 aaKnown RBP19.77■□□□□ 0.76
NRXN1-204ENST00000401669 SAMD1Q6SPF0 538 aaPredicted RBP19.77■□□□□ 0.75
NRXN1-204ENST00000401669 EIF2S2P20042 333 aaKnown RBP19.76■□□□□ 0.75
NRXN1-204ENST00000401669 DIAPH3Q9NSV4 1193 aa19.76■□□□□ 0.75
NRXN1-204ENST00000401669 RBM19Q9Y4C8 960 aaKnown RBP19.76■□□□□ 0.75
NRXN1-204ENST00000401669 C9orf78Q9NZ63 289 aaPredicted RBP19.76■□□□□ 0.75
NRXN1-204ENST00000401669 ATP6V1DQ9Y5K8 247 aa19.75■□□□□ 0.75
NRXN1-204ENST00000401669 IPO7O95373 1038 aaKnown RBP19.74■□□□□ 0.75
NRXN1-204ENST00000401669 FOXD4L6Q3SYB3 417 aaPredicted RBP19.73■□□□□ 0.75
NRXN1-204ENST00000401669 ANKRD45Q5TZF3 282 aa19.73■□□□□ 0.75
NRXN1-204ENST00000401669 FOXD4L3Q6VB84 417 aaPredicted RBP19.73■□□□□ 0.75
NRXN1-204ENST00000401669 CPLX1O14810 134 aa19.72■□□□□ 0.75
NRXN1-204ENST00000401669 NLRP13Q86W25 1043 aa19.72■□□□□ 0.75
NRXN1-204ENST00000401669 PATL2C9JE40 543 aaKnown RBP19.72■□□□□ 0.75
NRXN1-204ENST00000401669 SETQ01105 290 aaPredicted RBP19.71■□□□□ 0.75
NRXN1-204ENST00000401669 ANKRD20A12PQ8NF67 263 aa19.71■□□□□ 0.75
NRXN1-204ENST00000401669 RUFY2Q8WXA3 655 aa19.71■□□□□ 0.75
NRXN1-204ENST00000401669 RBM33Q96EV2 1170 aaKnown RBP19.71■□□□□ 0.75
NRXN1-204ENST00000401669 TRDNQ13061 729 aa19.7■□□□□ 0.74
NRXN1-204ENST00000401669 CECR2Q9BXF3 1484 aa19.7■□□□□ 0.74
NRXN1-204ENST00000401669 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.69■□□□□ 0.74
NRXN1-204ENST00000401669 IFIT2P09913 472 aaKnown RBP19.68■□□□□ 0.74
NRXN1-204ENST00000401669 R3HCC1Q9Y3T6 440 aaKnown RBP19.68■□□□□ 0.74
NRXN1-204ENST00000401669 ZKSCAN1P17029 563 aaPredicted RBP19.68■□□□□ 0.74
NRXN1-204ENST00000401669 NFXL1Q6ZNB6 911 aa19.68■□□□□ 0.74
NRXN1-204ENST00000401669 ERICH2A1L162 156 aa19.68■□□□□ 0.74
NRXN1-204ENST00000401669 PSME1Q06323 249 aa19.68■□□□□ 0.74
NRXN1-204ENST00000401669 RSPH4AQ5TD94 716 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms