RNA–Protein interactions for RNA: ENST00000400866.4

ATRX-203, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-203ENST00000400866 ANO8Q9HCE9 1232 aaPredicted RBP12.54□□□□□ -0.4
ATRX-203ENST00000400866 WDR70Q9NW82 654 aa12.53□□□□□ -0.4
ATRX-203ENST00000400866 NBR1Q14596 966 aa12.52□□□□□ -0.41
ATRX-203ENST00000400866 EVI5O60447 810 aa12.51□□□□□ -0.41
ATRX-203ENST00000400866 ANKK1Q8NFD2 765 aa12.48□□□□□ -0.41
ATRX-203ENST00000400866 ADAM33Q9BZ11 813 aa12.47□□□□□ -0.41
ATRX-203ENST00000400866 MAP3K9P80192 1104 aa12.46□□□□□ -0.41
ATRX-203ENST00000400866 RABGEF1Q9UJ41 708 aa12.46□□□□□ -0.41
ATRX-203ENST00000400866 PPP1R3GB7ZBB8 358 aa12.45□□□□□ -0.42
ATRX-203ENST00000400866 ITGBL1O95965 494 aaPredicted RBP12.43□□□□□ -0.42
ATRX-203ENST00000400866 NYAP1Q6ZVC0 841 aa12.43□□□□□ -0.42
ATRX-203ENST00000400866 DDX27Q96GQ7 796 aaKnown RBP12.42□□□□□ -0.42
ATRX-203ENST00000400866 NCKAP5LQ9HCH0 1330 aa12.41□□□□□ -0.42
ATRX-203ENST00000400866 P3H3Q8IVL6 736 aa12.41□□□□□ -0.42
ATRX-203ENST00000400866 PRKCSHP14314 528 aaPredicted RBP12.4□□□□□ -0.42
ATRX-203ENST00000400866 LAPTM4BQ86VI4 370 aa12.4□□□□□ -0.42
ATRX-203ENST00000400866 KCNV2Q8TDN2 545 aa12.4□□□□□ -0.42
ATRX-203ENST00000400866 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
ATRX-203ENST00000400866 FBXW7Q969H0 707 aa12.39□□□□□ -0.43
ATRX-203ENST00000400866 Q6ZNB5 142 aa12.37□□□□□ -0.43
ATRX-203ENST00000400866 SOWAHBA6NEL2 793 aa12.35□□□□□ -0.43
ATRX-203ENST00000400866 TYW1BQ6NUM6 668 aa12.35□□□□□ -0.43
ATRX-203ENST00000400866 KCNC4Q03721 635 aa12.34□□□□□ -0.43
ATRX-203ENST00000400866 PROX2Q3B8N5 592 aa12.34□□□□□ -0.43
ATRX-203ENST00000400866 TPRNQ4KMQ1 711 aa12.34□□□□□ -0.43
ATRX-203ENST00000400866 PCDHGA10Q9Y5H3 936 aa12.34□□□□□ -0.43
ATRX-203ENST00000400866 ONECUT3O60422 494 aaPredicted RBP12.33□□□□□ -0.44
ATRX-203ENST00000400866 BCAMP50895 628 aa12.33□□□□□ -0.44
ATRX-203ENST00000400866 E2F4Q16254 413 aa12.33□□□□□ -0.44
ATRX-203ENST00000400866 PHF14O94880 888 aa12.32□□□□□ -0.44
ATRX-203ENST00000400866 MFSD10Q14728 455 aa12.31□□□□□ -0.44
ATRX-203ENST00000400866 ZFRQ96KR1 1074 aaKnown RBP12.31□□□□□ -0.44
ATRX-203ENST00000400866 LAPTM4AQ15012 233 aa12.3□□□□□ -0.44
ATRX-203ENST00000400866 COL9A1P20849 921 aa12.29□□□□□ -0.44
ATRX-203ENST00000400866 KIAA1468Q9P260 1216 aa12.29□□□□□ -0.44
ATRX-203ENST00000400866 EPAS1Q99814 870 aa12.26□□□□□ -0.45
ATRX-203ENST00000400866 EMILIN3Q9NT22 766 aa12.26□□□□□ -0.45
ATRX-203ENST00000400866 WBP1LQ9NX94 342 aa12.26□□□□□ -0.45
ATRX-203ENST00000400866 ARHGEF1Q92888 912 aaKnown RBP12.24□□□□□ -0.45
ATRX-203ENST00000400866 FAM98CQ17RN3 349 aaKnown RBP12.23□□□□□ -0.45
ATRX-203ENST00000400866 TSR3Q9UJK0 312 aaKnown RBP12.23□□□□□ -0.45
ATRX-203ENST00000400866 C6orf132Q5T0Z8 1188 aa12.22□□□□□ -0.45
ATRX-203ENST00000400866 LRCH3Q96II8 777 aa12.22□□□□□ -0.45
ATRX-203ENST00000400866 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.22□□□□□ -0.45
ATRX-203ENST00000400866 TRIM6-TRIM34B2RNG4 842 aa12.2□□□□□ -0.46
ATRX-203ENST00000400866 SEPT9Q9UHD8 586 aaPredicted RBP12.2□□□□□ -0.46
ATRX-203ENST00000400866 HPS5Q9UPZ3 1129 aa12.19□□□□□ -0.46
ATRX-203ENST00000400866 CAMK2BQ13554 666 aa12.17□□□□□ -0.46
ATRX-203ENST00000400866 SEMA3EO15041 775 aa12.15□□□□□ -0.46
ATRX-203ENST00000400866 GFRA3O60609 400 aa12.14□□□□□ -0.47
ATRX-203ENST00000400866 TRAF7Q6Q0C0 670 aa12.14□□□□□ -0.47
ATRX-203ENST00000400866 PACS2Q86VP3 889 aa12.14□□□□□ -0.47
ATRX-203ENST00000400866 PPP4CP60510 307 aa12.12□□□□□ -0.47
ATRX-203ENST00000400866 RBM33Q96EV2 1170 aaKnown RBP12.11□□□□□ -0.47
ATRX-203ENST00000400866 LMOD2Q6P5Q4 547 aa12.1□□□□□ -0.47
ATRX-203ENST00000400866 TULP1O00294 542 aaPredicted RBP12.09□□□□□ -0.47
ATRX-203ENST00000400866 DPYSL4O14531 572 aa12.09□□□□□ -0.47
ATRX-203ENST00000400866 ARIH1Q9Y4X5 557 aaPredicted RBP12.09□□□□□ -0.47
ATRX-203ENST00000400866 TESPA1A2RU30 521 aaPredicted RBP12.08□□□□□ -0.48
ATRX-203ENST00000400866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.08□□□□□ -0.48
ATRX-203ENST00000400866 NRG2O14511 850 aaPredicted RBP12.05□□□□□ -0.48
ATRX-203ENST00000400866 DDX12PQ92771 950 aa12.04□□□□□ -0.48
ATRX-203ENST00000400866 PRKD2Q9BZL6 878 aa12.04□□□□□ -0.48
ATRX-203ENST00000400866 MAP3K7O43318 606 aa12.03□□□□□ -0.48
ATRX-203ENST00000400866 EN1Q05925 392 aaPredicted RBP12.02□□□□□ -0.49
ATRX-203ENST00000400866 V9GY48 417 aaPredicted RBP12.02□□□□□ -0.49
ATRX-203ENST00000400866 TJAP1Q5JTD0 557 aa12.01□□□□□ -0.49
ATRX-203ENST00000400866 IL21Q9HBE4 155 aa12.01□□□□□ -0.49
ATRX-203ENST00000400866 TSKSQ9UJT2 592 aa12.01□□□□□ -0.49
ATRX-203ENST00000400866 MLLT3P42568 568 aaPredicted RBP12□□□□□ -0.49
ATRX-203ENST00000400866 LCE2BO14633 110 aa11.99□□□□□ -0.49
ATRX-203ENST00000400866 HDGFP51858 240 aaKnown RBP11.99□□□□□ -0.49
ATRX-203ENST00000400866 SMYD5Q6GMV2 418 aa11.99□□□□□ -0.49
ATRX-203ENST00000400866 CERKQ8TCT0 537 aa11.99□□□□□ -0.49
ATRX-203ENST00000400866 SAMD7Q7Z3H4 446 aa11.98□□□□□ -0.49
ATRX-203ENST00000400866 SPDYE16A6NNV3 312 aaPredicted RBP11.97□□□□□ -0.49
ATRX-203ENST00000400866 PDIA6Q15084 440 aa11.97□□□□□ -0.49
ATRX-203ENST00000400866 MTRQ99707 1265 aa11.97□□□□□ -0.49
ATRX-203ENST00000400866 PPP1R18Q6NYC8 613 aa11.96□□□□□ -0.49
ATRX-203ENST00000400866 CDCA7LQ96GN5 454 aa11.96□□□□□ -0.49
ATRX-203ENST00000400866 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
ATRX-203ENST00000400866 TSR1Q2NL82 804 aaKnown RBP11.95□□□□□ -0.5
ATRX-203ENST00000400866 NECTIN2Q92692 538 aa11.95□□□□□ -0.5
ATRX-203ENST00000400866 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.95□□□□□ -0.5
ATRX-203ENST00000400866 GGCXP38435 758 aa11.94□□□□□ -0.5
ATRX-203ENST00000400866 PRSS12P56730 875 aa11.94□□□□□ -0.5
ATRX-203ENST00000400866 RBM26Q5T8P6 1007 aaKnown RBP11.92□□□□□ -0.5
ATRX-203ENST00000400866 ZC3H15Q8WU90 426 aaKnown RBP11.92□□□□□ -0.5
ATRX-203ENST00000400866 SMAPO00193 183 aa11.91□□□□□ -0.5
ATRX-203ENST00000400866 ZNF787Q6DD87 383 aa11.91□□□□□ -0.5
ATRX-203ENST00000400866 TATDN2Q93075 761 aa11.91□□□□□ -0.5
ATRX-203ENST00000400866 PNMA3Q9UL41 463 aa11.9□□□□□ -0.5
ATRX-203ENST00000400866 PDZRN3Q9UPQ7 1066 aa11.9□□□□□ -0.5
ATRX-203ENST00000400866 GRXCR2A6NFK2 248 aa11.89□□□□□ -0.51
ATRX-203ENST00000400866 RNF40O75150 1001 aa11.89□□□□□ -0.51
ATRX-203ENST00000400866 SLC4A3P48751 1232 aa11.85□□□□□ -0.51
ATRX-203ENST00000400866 GPIHBP1Q8IV16 184 aa11.85□□□□□ -0.51
ATRX-203ENST00000400866 ZNF516Q92618 1163 aa11.84□□□□□ -0.51
ATRX-203ENST00000400866 TMUB1Q9BVT8 246 aa11.83□□□□□ -0.52
ATRX-203ENST00000400866 RBM27Q9P2N5 1060 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms