RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 RUSC2Q8N2Y8 1516 aa8.38□□□□□ -1.07
HMGB3P7-201ENST00000400214 CARMIL1Q5VZK9 1371 aa8.36□□□□□ -1.07
HMGB3P7-201ENST00000400214 SNPHO15079 494 aa8.36□□□□□ -1.07
HMGB3P7-201ENST00000400214 RAD21O60216 631 aa8.36□□□□□ -1.07
HMGB3P7-201ENST00000400214 IL27Q8NEV9 243 aa8.36□□□□□ -1.07
HMGB3P7-201ENST00000400214 ARAP1Q96P48 1450 aa8.36□□□□□ -1.07
HMGB3P7-201ENST00000400214 KIAA0586Q9BVV6 1533 aa8.35□□□□□ -1.07
HMGB3P7-201ENST00000400214 IFNL1Q8IU54 200 aa8.35□□□□□ -1.07
HMGB3P7-201ENST00000400214 MARVELD3Q96A59 401 aa8.35□□□□□ -1.07
HMGB3P7-201ENST00000400214 GPBP1L1Q9HC44 474 aaPredicted RBP8.35□□□□□ -1.07
HMGB3P7-201ENST00000400214 PLEKHG5O94827 1062 aa8.34□□□□□ -1.07
HMGB3P7-201ENST00000400214 MKRN3Q13064 507 aaKnown RBP8.34□□□□□ -1.07
HMGB3P7-201ENST00000400214 MIER1Q8N108 512 aa8.34□□□□□ -1.07
HMGB3P7-201ENST00000400214 RGS22Q8NE09 1264 aa8.34□□□□□ -1.07
HMGB3P7-201ENST00000400214 TMEM106CQ9BVX2 250 aa8.34□□□□□ -1.07
HMGB3P7-201ENST00000400214 RAPGEF2Q9Y4G8 1499 aa8.33□□□□□ -1.08
HMGB3P7-201ENST00000400214 ZMYND10O75800 440 aa8.33□□□□□ -1.08
HMGB3P7-201ENST00000400214 PRXQ9BXM0 1461 aa8.32□□□□□ -1.08
HMGB3P7-201ENST00000400214 ERCC6L2Q5T890 1561 aa8.32□□□□□ -1.08
HMGB3P7-201ENST00000400214 EEA1Q15075 1411 aa8.32□□□□□ -1.08
HMGB3P7-201ENST00000400214 CDK11BP21127 795 aaKnown RBP8.32□□□□□ -1.08
HMGB3P7-201ENST00000400214 KRTAP3-3Q9BYR6 98 aa8.32□□□□□ -1.08
HMGB3P7-201ENST00000400214 KRTAP3-2Q9BYR7 98 aa8.32□□□□□ -1.08
HMGB3P7-201ENST00000400214 CDK11AQ9UQ88 783 aaPredicted RBP8.32□□□□□ -1.08
HMGB3P7-201ENST00000400214 CTTNBP2Q8WZ74 1663 aa8.32□□□□□ -1.08
HMGB3P7-201ENST00000400214 JPH4Q96JJ6 628 aa8.31□□□□□ -1.08
HMGB3P7-201ENST00000400214 WDR70Q9NW82 654 aa8.31□□□□□ -1.08
HMGB3P7-201ENST00000400214 CCDC82Q8N4S0 544 aa8.3□□□□□ -1.08
HMGB3P7-201ENST00000400214 MTMR7Q9Y216 660 aa8.3□□□□□ -1.08
HMGB3P7-201ENST00000400214 IQGAP2Q13576 1575 aa8.3□□□□□ -1.08
HMGB3P7-201ENST00000400214 PRG4Q92954 1404 aaPredicted RBP8.29□□□□□ -1.08
HMGB3P7-201ENST00000400214 STK25O00506 426 aa8.29□□□□□ -1.08
HMGB3P7-201ENST00000400214 HMGB1P09429 215 aaKnown RBP8.29□□□□□ -1.08
HMGB3P7-201ENST00000400214 CYB5RLQ6IPT4 315 aa8.29□□□□□ -1.08
HMGB3P7-201ENST00000400214 CADPS2Q86UW7 1296 aa8.29□□□□□ -1.08
HMGB3P7-201ENST00000400214 OCEL1Q9H607 264 aa8.29□□□□□ -1.08
HMGB3P7-201ENST00000400214 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.29□□□□□ -1.08
HMGB3P7-201ENST00000400214 HSP90B1P14625 803 aaKnown RBP8.28□□□□□ -1.08
HMGB3P7-201ENST00000400214 RIOK3O14730 519 aaKnown RBP8.27□□□□□ -1.09
HMGB3P7-201ENST00000400214 NUBP1P53384 320 aa8.27□□□□□ -1.09
HMGB3P7-201ENST00000400214 ZNF428Q96B54 188 aa8.27□□□□□ -1.09
HMGB3P7-201ENST00000400214 TRAIPQ9BWF2 469 aa8.27□□□□□ -1.09
HMGB3P7-201ENST00000400214 UGGT2Q9NYU1 1516 aa8.27□□□□□ -1.09
HMGB3P7-201ENST00000400214 POTEB3A0JP26 581 aa8.26□□□□□ -1.09
HMGB3P7-201ENST00000400214 EMP3P54852 163 aa8.26□□□□□ -1.09
HMGB3P7-201ENST00000400214 POTEBQ6S5H4 581 aa8.26□□□□□ -1.09
HMGB3P7-201ENST00000400214 KIF21BO75037 1637 aa8.25□□□□□ -1.09
HMGB3P7-201ENST00000400214 TESPA1A2RU30 521 aaPredicted RBP8.25□□□□□ -1.09
HMGB3P7-201ENST00000400214 RBM25P49756 843 aaKnown RBP8.25□□□□□ -1.09
HMGB3P7-201ENST00000400214 AEBP1Q8IUX7 1158 aa8.25□□□□□ -1.09
HMGB3P7-201ENST00000400214 HS3ST6Q96QI5 342 aa8.25□□□□□ -1.09
HMGB3P7-201ENST00000400214 DISP1Q96F81 1524 aa8.24□□□□□ -1.09
HMGB3P7-201ENST00000400214 SEMA3EO15041 775 aa8.24□□□□□ -1.09
HMGB3P7-201ENST00000400214 FOXD4L5Q5VV16 416 aaPredicted RBP8.24□□□□□ -1.09
HMGB3P7-201ENST00000400214 FOXD4L4Q8WXT5 416 aaPredicted RBP8.24□□□□□ -1.09
HMGB3P7-201ENST00000400214 KDM4CQ9H3R0 1056 aa8.24□□□□□ -1.09
HMGB3P7-201ENST00000400214 CARMIL2Q6F5E8 1435 aa8.23□□□□□ -1.09
HMGB3P7-201ENST00000400214 BARGINQ6ZT62 677 aa8.23□□□□□ -1.09
HMGB3P7-201ENST00000400214 KIAA0556O60303 1618 aa8.22□□□□□ -1.09
HMGB3P7-201ENST00000400214 TMCO4Q5TGY1 634 aa8.22□□□□□ -1.09
HMGB3P7-201ENST00000400214 PUS7Q96PZ0 661 aaKnown RBP8.22□□□□□ -1.09
HMGB3P7-201ENST00000400214 RYDENQ9NUL5 291 aaKnown RBP8.22□□□□□ -1.09
HMGB3P7-201ENST00000400214 ADCY10Q96PN6 1610 aa8.21□□□□□ -1.09
HMGB3P7-201ENST00000400214 ARHGEF1Q92888 912 aaKnown RBP8.21□□□□□ -1.1
HMGB3P7-201ENST00000400214 AK7Q96M32 723 aa8.21□□□□□ -1.1
HMGB3P7-201ENST00000400214 CHMP4AQ9BY43 222 aa8.21□□□□□ -1.1
HMGB3P7-201ENST00000400214 TNIKQ9UKE5 1360 aa8.21□□□□□ -1.1
HMGB3P7-201ENST00000400214 GOLGA3Q08378 1498 aa8.2□□□□□ -1.1
HMGB3P7-201ENST00000400214 MFAP1P55081 439 aaKnown RBP8.2□□□□□ -1.1
HMGB3P7-201ENST00000400214 FAM212AQ96EL1 285 aa8.2□□□□□ -1.1
HMGB3P7-201ENST00000400214 ZBTB47Q9UFB7 747 aaPredicted RBP8.2□□□□□ -1.1
HMGB3P7-201ENST00000400214 PTPRGP23470 1445 aa8.2□□□□□ -1.1
HMGB3P7-201ENST00000400214 SAMD9Q5K651 1589 aa8.19□□□□□ -1.1
HMGB3P7-201ENST00000400214 PDCD7Q8N8D1 485 aaKnown RBP8.19□□□□□ -1.1
HMGB3P7-201ENST00000400214 KIF13AQ9H1H9 1805 aa8.18□□□□□ -1.1
HMGB3P7-201ENST00000400214 FAM205CA6NFA0 338 aa8.18□□□□□ -1.1
HMGB3P7-201ENST00000400214 VGFO15240 615 aaPredicted RBP8.18□□□□□ -1.1
HMGB3P7-201ENST00000400214 STK24Q9Y6E0 443 aa8.18□□□□□ -1.1
HMGB3P7-201ENST00000400214 UHRF1BP1LA0JNW5 1464 aa8.18□□□□□ -1.1
HMGB3P7-201ENST00000400214 TRAK2O60296 914 aa8.17□□□□□ -1.1
HMGB3P7-201ENST00000400214 FLIIQ13045 1269 aa8.17□□□□□ -1.1
HMGB3P7-201ENST00000400214 GSE1Q14687 1217 aa8.17□□□□□ -1.1
HMGB3P7-201ENST00000400214 GZF1Q9H116 711 aaPredicted RBP8.17□□□□□ -1.1
HMGB3P7-201ENST00000400214 MAPKBP1O60336 1514 aa8.17□□□□□ -1.1
HMGB3P7-201ENST00000400214 C3orf67Q6ZVT6 689 aa8.16□□□□□ -1.1
HMGB3P7-201ENST00000400214 FAM9AQ8IZU1 332 aaPredicted RBP8.16□□□□□ -1.1
HMGB3P7-201ENST00000400214 BCL11BQ9C0K0 894 aaPredicted RBP8.16□□□□□ -1.1
HMGB3P7-201ENST00000400214 ABCC2Q92887 1545 aa8.15□□□□□ -1.1
HMGB3P7-201ENST00000400214 UACAQ9BZF9 1416 aa8.15□□□□□ -1.1
HMGB3P7-201ENST00000400214 CLUAP1Q96AJ1 413 aa8.15□□□□□ -1.1
HMGB3P7-201ENST00000400214 ABCA8O94911 1581 aa8.14□□□□□ -1.11
HMGB3P7-201ENST00000400214 EFCAB5A4FU69 1503 aa8.13□□□□□ -1.11
HMGB3P7-201ENST00000400214 KDM5BQ9UGL1 1544 aa8.13□□□□□ -1.11
HMGB3P7-201ENST00000400214 A6NJR5 290 aa8.13□□□□□ -1.11
HMGB3P7-201ENST00000400214 ZCCHC11Q5TAX3 1644 aaKnown RBP8.12□□□□□ -1.11
HMGB3P7-201ENST00000400214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.12□□□□□ -1.11
HMGB3P7-201ENST00000400214 PDE4DQ08499 809 aa8.12□□□□□ -1.11
HMGB3P7-201ENST00000400214 ZFP91Q96JP5 570 aaPredicted RBP8.12□□□□□ -1.11
HMGB3P7-201ENST00000400214 ABCC10Q5T3U5 1492 aa8.12□□□□□ -1.11
HMGB3P7-201ENST00000400214 DIP2BQ9P265 1576 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms