RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 NCOA1Q15788 1441 aa17.76■□□□□ 0.43
SIRPA-203ENST00000400068 A0A0U1RQG5 324 aaPredicted RBP17.75■□□□□ 0.43
SIRPA-203ENST00000400068 PLIN1O60240 522 aa17.75■□□□□ 0.43
SIRPA-203ENST00000400068 PKNOX2Q96KN3 472 aa17.75■□□□□ 0.43
SIRPA-203ENST00000400068 CFAP43Q8NDM7 1665 aa17.75■□□□□ 0.43
SIRPA-203ENST00000400068 SRPK2P78362 688 aaKnown RBP17.74■□□□□ 0.43
SIRPA-203ENST00000400068 FRAT1Q92837 279 aaPredicted RBP17.74■□□□□ 0.43
SIRPA-203ENST00000400068 RCAN3Q9UKA8 241 aa17.74■□□□□ 0.43
SIRPA-203ENST00000400068 MAGI1Q96QZ7 1491 aaPredicted RBP17.74■□□□□ 0.43
SIRPA-203ENST00000400068 U2SURPO15042 1029 aaKnown RBP17.74■□□□□ 0.43
SIRPA-203ENST00000400068 MAGI3Q5TCQ9 1506 aa17.73■□□□□ 0.43
SIRPA-203ENST00000400068 MYBBP1AQ9BQG0 1328 aaKnown RBP17.73■□□□□ 0.43
SIRPA-203ENST00000400068 OSCARQ8IYS5 282 aa17.72■□□□□ 0.43
SIRPA-203ENST00000400068 ROCK1Q13464 1354 aa17.72■□□□□ 0.43
SIRPA-203ENST00000400068 MORC1Q86VD1 984 aa17.72■□□□□ 0.43
SIRPA-203ENST00000400068 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.72■□□□□ 0.43
SIRPA-203ENST00000400068 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
SIRPA-203ENST00000400068 RGS3P49796 1198 aa17.71■□□□□ 0.43
SIRPA-203ENST00000400068 GPATCH8Q9UKJ3 1502 aaKnown RBP17.71■□□□□ 0.43
SIRPA-203ENST00000400068 AKNAQ7Z591 1439 aa17.71■□□□□ 0.43
SIRPA-203ENST00000400068 ABCA5Q8WWZ7 1642 aa17.71■□□□□ 0.43
SIRPA-203ENST00000400068 ADAMTS12P58397 1594 aa17.71■□□□□ 0.43
SIRPA-203ENST00000400068 RTN4Q9NQC3 1192 aaKnown RBP17.7■□□□□ 0.42
SIRPA-203ENST00000400068 ZBTB47Q9UFB7 747 aaPredicted RBP17.7■□□□□ 0.42
SIRPA-203ENST00000400068 CFAP70Q5T0N1 1121 aa17.69■□□□□ 0.42
SIRPA-203ENST00000400068 TMEM132EQ6IEE7 984 aa17.69■□□□□ 0.42
SIRPA-203ENST00000400068 SOX12O15370 315 aa17.68■□□□□ 0.42
SIRPA-203ENST00000400068 LAS1LQ9Y4W2 734 aaKnown RBP17.67■□□□□ 0.42
SIRPA-203ENST00000400068 ATP10BO94823 1461 aa17.67■□□□□ 0.42
SIRPA-203ENST00000400068 RRP7AQ9Y3A4 280 aaKnown RBP17.66■□□□□ 0.42
SIRPA-203ENST00000400068 DISP1Q96F81 1524 aa17.66■□□□□ 0.42
SIRPA-203ENST00000400068 CFAP53Q96M91 514 aa17.65■□□□□ 0.42
SIRPA-203ENST00000400068 SCAPERQ9BY12 1400 aa17.65■□□□□ 0.42
SIRPA-203ENST00000400068 CDCA7LQ96GN5 454 aa17.65■□□□□ 0.42
SIRPA-203ENST00000400068 WDR62O43379 1518 aa17.65■□□□□ 0.42
SIRPA-203ENST00000400068 RAPGEF6Q8TEU7 1601 aa17.64■□□□□ 0.41
SIRPA-203ENST00000400068 EXOC6Q8TAG9 804 aa17.64■□□□□ 0.41
SIRPA-203ENST00000400068 RPRD2Q5VT52 1461 aaKnown RBP17.63■□□□□ 0.41
SIRPA-203ENST00000400068 EIF4G3O43432 1585 aaKnown RBP17.62■□□□□ 0.41
SIRPA-203ENST00000400068 TARBP1Q13395 1621 aaKnown RBP17.62■□□□□ 0.41
SIRPA-203ENST00000400068 KIAA0556O60303 1618 aa17.62■□□□□ 0.41
SIRPA-203ENST00000400068 RAPGEF3O95398 923 aa17.62■□□□□ 0.41
SIRPA-203ENST00000400068 U2AF1L5P0DN76 240 aaPredicted RBP17.6■□□□□ 0.41
SIRPA-203ENST00000400068 U2AF1Q01081 240 aaKnown RBP eCLIP17.6■□□□□ 0.41
SIRPA-203ENST00000400068 NUTM2FA1L443 756 aa17.6■□□□□ 0.41
SIRPA-203ENST00000400068 SAMD9Q5K651 1589 aa17.6■□□□□ 0.41
SIRPA-203ENST00000400068 ZBTB7CA1YPR0 619 aa17.59■□□□□ 0.41
SIRPA-203ENST00000400068 PBRM1Q86U86 1689 aa17.59■□□□□ 0.41
SIRPA-203ENST00000400068 C14orf37Q86TY3 774 aa17.58■□□□□ 0.41
SIRPA-203ENST00000400068 PNISRQ8TF01 805 aaKnown RBP17.58■□□□□ 0.41
SIRPA-203ENST00000400068 APAF1O14727 1248 aa17.58■□□□□ 0.4
SIRPA-203ENST00000400068 PLEKHH2Q8IVE3 1493 aa17.57■□□□□ 0.4
SIRPA-203ENST00000400068 ADAMTS8Q9UP79 889 aa17.57■□□□□ 0.4
SIRPA-203ENST00000400068 CCDC141Q6ZP82 1450 aa17.57■□□□□ 0.4
SIRPA-203ENST00000400068 KIF14Q15058 1648 aa17.55■□□□□ 0.4
SIRPA-203ENST00000400068 BCL2L13Q9BXK5 485 aa17.55■□□□□ 0.4
SIRPA-203ENST00000400068 MINK1Q8N4C8 1332 aaPredicted RBP17.55■□□□□ 0.4
SIRPA-203ENST00000400068 TCOF1Q13428 1488 aaKnown RBP17.55■□□□□ 0.4
SIRPA-203ENST00000400068 CLUAP1Q96AJ1 413 aa17.55■□□□□ 0.4
SIRPA-203ENST00000400068 MAPK8IP3Q9UPT6 1336 aa17.55■□□□□ 0.4
SIRPA-203ENST00000400068 GOLGA2Q08379 1002 aa17.54■□□□□ 0.4
SIRPA-203ENST00000400068 KDM6BO15054 1643 aa17.54■□□□□ 0.4
SIRPA-203ENST00000400068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.53■□□□□ 0.4
SIRPA-203ENST00000400068 EIF3AQ14152 1382 aaKnown RBP17.53■□□□□ 0.4
SIRPA-203ENST00000400068 RRP1P56182 461 aaKnown RBP17.52■□□□□ 0.4
SIRPA-203ENST00000400068 FAM69CQ0P6D2 419 aa17.52■□□□□ 0.39
SIRPA-203ENST00000400068 FTSJ3Q8IY81 847 aaKnown RBP17.51■□□□□ 0.39
SIRPA-203ENST00000400068 ERICH6BQ5W0A0 696 aa17.51■□□□□ 0.39
SIRPA-203ENST00000400068 CRBNQ96SW2 442 aa17.51■□□□□ 0.39
SIRPA-203ENST00000400068 TRHP20396 242 aaPredicted RBP17.49■□□□□ 0.39
SIRPA-203ENST00000400068 SLC12A5Q9H2X9 1139 aa17.49■□□□□ 0.39
SIRPA-203ENST00000400068 CABP2Q9NPB3 220 aa17.48■□□□□ 0.39
SIRPA-203ENST00000400068 NOP58Q9Y2X3 529 aaKnown RBP17.48■□□□□ 0.39
SIRPA-203ENST00000400068 ARXQ96QS3 562 aa17.48■□□□□ 0.39
SIRPA-203ENST00000400068 CEP170Q5SW79 1584 aa17.47■□□□□ 0.39
SIRPA-203ENST00000400068 CENPJQ9HC77 1338 aaPredicted RBP17.46■□□□□ 0.39
SIRPA-203ENST00000400068 PPP2R1AP30153 589 aa17.46■□□□□ 0.39
SIRPA-203ENST00000400068 PZPP20742 1482 aa17.46■□□□□ 0.39
SIRPA-203ENST00000400068 PDE3BQ13370 1112 aa17.45■□□□□ 0.38
SIRPA-203ENST00000400068 VGFO15240 615 aaPredicted RBP17.44■□□□□ 0.38
SIRPA-203ENST00000400068 SYCP2Q9BX26 1530 aa17.44■□□□□ 0.38
SIRPA-203ENST00000400068 BRD4O60885 1362 aaPredicted RBP17.44■□□□□ 0.38
SIRPA-203ENST00000400068 NUP160Q12769 1436 aa17.44■□□□□ 0.38
SIRPA-203ENST00000400068 UPF2Q9HAU5 1272 aaKnown RBP17.43■□□□□ 0.38
SIRPA-203ENST00000400068 GGNBP2Q9H3C7 697 aa17.43■□□□□ 0.38
SIRPA-203ENST00000400068 ERBINQ96RT1 1412 aa17.42■□□□□ 0.38
SIRPA-203ENST00000400068 ADGRF5Q8IZF2 1346 aa17.42■□□□□ 0.38
SIRPA-203ENST00000400068 HDGFL2Q7Z4V5 671 aaPredicted RBP17.42■□□□□ 0.38
SIRPA-203ENST00000400068 SKAP1Q86WV1 359 aa17.42■□□□□ 0.38
SIRPA-203ENST00000400068 DISP3Q9P2K9 1392 aa17.41■□□□□ 0.38
SIRPA-203ENST00000400068 LMOD2Q6P5Q4 547 aa17.4■□□□□ 0.38
SIRPA-203ENST00000400068 TRAPPC8Q9Y2L5 1435 aa17.4■□□□□ 0.38
SIRPA-203ENST00000400068 ELL2O00472 640 aaPredicted RBP17.39■□□□□ 0.37
SIRPA-203ENST00000400068 DNMT1P26358 1616 aaKnown RBP17.38■□□□□ 0.37
SIRPA-203ENST00000400068 PDE4CQ08493 712 aa17.38■□□□□ 0.37
SIRPA-203ENST00000400068 COG6Q9Y2V7 657 aa17.38■□□□□ 0.37
SIRPA-203ENST00000400068 MTHFSP49914 203 aa17.37■□□□□ 0.37
SIRPA-203ENST00000400068 EVC2Q86UK5 1308 aa17.37■□□□□ 0.37
SIRPA-203ENST00000400068 TERF2IPQ9NYB0 399 aa17.36■□□□□ 0.37
SIRPA-203ENST00000400068 CGNL1Q0VF96 1302 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms