RNA–Protein interactions for RNA: ENST00000399240.5

RUNX1-205, Transcript of runt related transcription factor 1, humanhuman

TSL 3 BASIC

Gene RUNX1, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-205ENST00000399240 UNC13BO14795 1591 aa36.47■■■■□ 3.43
RUNX1-205ENST00000399240 ARID4BQ4LE39 1312 aaPredicted RBP36.43■■■■□ 3.42
RUNX1-205ENST00000399240 PRDM15P57071 1507 aaPredicted RBP36.4■■■■□ 3.42
RUNX1-205ENST00000399240 HRCP23327 699 aa36.39■■■■□ 3.42
RUNX1-205ENST00000399240 GGT6Q6P531 493 aa36.39■■■■□ 3.42
RUNX1-205ENST00000399240 MLECQ14165 292 aa36.36■■■■□ 3.41
RUNX1-205ENST00000399240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.36■■■■□ 3.412e-6■■□□□ 11.6
RUNX1-205ENST00000399240 VWDEQ8N2E2 1590 aa36.33■■■■□ 3.41
RUNX1-205ENST00000399240 NUP155O75694 1391 aa36.32■■■■□ 3.41
RUNX1-205ENST00000399240 TRIM52Q96A61 297 aa36.32■■■■□ 3.41
RUNX1-205ENST00000399240 IQGAP3Q86VI3 1631 aa36.32■■■■□ 3.4
RUNX1-205ENST00000399240 KDM5DQ9BY66 1539 aa36.32■■■■□ 3.4
RUNX1-205ENST00000399240 CEP152O94986 1710 aa36.31■■■■□ 3.4
RUNX1-205ENST00000399240 FAM135AQ9P2D6 1515 aa36.27■■■■□ 3.4
RUNX1-205ENST00000399240 PZPP20742 1482 aa36.27■■■■□ 3.4
RUNX1-205ENST00000399240 KANK1Q14678 1352 aa36.25■■■■□ 3.39
RUNX1-205ENST00000399240 ZC3H13Q5T200 1668 aaKnown RBP36.24■■■■□ 3.39
RUNX1-205ENST00000399240 ACIN1Q9UKV3 1341 aaKnown RBP36.24■■■■□ 3.39
RUNX1-205ENST00000399240 ABCC3O15438 1527 aa36.24■■■■□ 3.39
RUNX1-205ENST00000399240 CLTCQ00610 1675 aaKnown RBP36.23■■■■□ 3.39
RUNX1-205ENST00000399240 FER1L4A9Z1Z3 1794 aa36.22■■■■□ 3.39
RUNX1-205ENST00000399240 ADAMTSL3P82987 1691 aa36.2■■■■□ 3.39
RUNX1-205ENST00000399240 WASHC2CQ9Y4E1 1318 aa36.2■■■■□ 3.39
RUNX1-205ENST00000399240 LMTK2Q8IWU2 1503 aa36.19■■■■□ 3.38
RUNX1-205ENST00000399240 PPP6R1Q9UPN7 881 aa36.19■■■■□ 3.38
RUNX1-205ENST00000399240 TET3O43151 1660 aa36.18■■■■□ 3.38
RUNX1-205ENST00000399240 CAMSAP1Q5T5Y3 1602 aa36.17■■■■□ 3.38
RUNX1-205ENST00000399240 MADDQ8WXG6 1647 aa36.17■■■■□ 3.38
RUNX1-205ENST00000399240 MPHOSPH9Q99550 1183 aa36.15■■■■□ 3.38
RUNX1-205ENST00000399240 SLC4A1APQ9BWU0 796 aaKnown RBP36.15■■■■□ 3.38
RUNX1-205ENST00000399240 E9PCH4 1651 aa36.12■■■■□ 3.37
RUNX1-205ENST00000399240 EFCAB6Q5THR3 1501 aa36.12■■■■□ 3.37
RUNX1-205ENST00000399240 DHX57Q6P158 1386 aaKnown RBP36.1■■■■□ 3.37
RUNX1-205ENST00000399240 RIMS1Q86UR5 1692 aaKnown RBP36.09■■■■□ 3.37
RUNX1-205ENST00000399240 MROH2AA6NES4 1674 aa36.08■■■■□ 3.37
RUNX1-205ENST00000399240 ESF1Q9H501 851 aaKnown RBP36.08■■■■□ 3.37
RUNX1-205ENST00000399240 CNTLNQ9NXG0 1405 aa36.06■■■■□ 3.36
RUNX1-205ENST00000399240 PKD2Q13563 968 aa36.05■■■■□ 3.36
RUNX1-205ENST00000399240 CFAP65Q6ZU64 1925 aaKnown RBP36.05■■■■□ 3.36
RUNX1-205ENST00000399240 NPATQ14207 1427 aa36.03■■■■□ 3.36
RUNX1-205ENST00000399240 FOXD1Q16676 465 aa36.02■■■■□ 3.36
RUNX1-205ENST00000399240 C3P01024 1663 aa36.01■■■■□ 3.36
RUNX1-205ENST00000399240 ZMYM3Q14202 1370 aa36.01■■■■□ 3.35
RUNX1-205ENST00000399240 ARHGAP31Q2M1Z3 1444 aa36.01■■■■□ 3.35
RUNX1-205ENST00000399240 RPRD2Q5VT52 1461 aaKnown RBP35.97■■■■□ 3.35
RUNX1-205ENST00000399240 PREX1Q8TCU6 1659 aa35.94■■■■□ 3.34
RUNX1-205ENST00000399240 KDM4FA0A1W2PPD8 638 aa35.93■■■■□ 3.34
RUNX1-205ENST00000399240 SPHKAPQ2M3C7 1700 aa35.93■■■■□ 3.34
RUNX1-205ENST00000399240 CEBPAP49715 358 aaPredicted RBP35.91■■■■□ 3.34
RUNX1-205ENST00000399240 FBXO31Q5XUX0 539 aaPredicted RBP35.89■■■■□ 3.34
RUNX1-205ENST00000399240 PTPRMP28827 1452 aa35.88■■■■□ 3.33
RUNX1-205ENST00000399240 PLA2R1Q13018 1463 aa35.88■■■■□ 3.33
RUNX1-205ENST00000399240 ERVK-7P63135 1459 aa35.86■■■■□ 3.33
RUNX1-205ENST00000399240 PLPPR3Q6T4P5 718 aa35.85■■■■□ 3.33
RUNX1-205ENST00000399240 PTPRTO14522 1441 aa35.85■■■■□ 3.33
RUNX1-205ENST00000399240 SPATA31D1Q6ZQQ2 1576 aa35.85■■■■□ 3.33
RUNX1-205ENST00000399240 NOS1P29475 1434 aa35.85■■■■□ 3.33
RUNX1-205ENST00000399240 ANKRD30BQ9BXX2 1392 aa35.84■■■■□ 3.33
RUNX1-205ENST00000399240 SYNMO15061 1565 aa35.84■■■■□ 3.33
RUNX1-205ENST00000399240 CCER1Q8TC90 406 aaPredicted RBP35.83■■■■□ 3.33
RUNX1-205ENST00000399240 TRPM2O94759 1503 aa35.82■■■■□ 3.32
RUNX1-205ENST00000399240 UGGT1Q9NYU2 1555 aa35.78■■■■□ 3.32
RUNX1-205ENST00000399240 CLTCL1P53675 1640 aa35.75■■■■□ 3.31
RUNX1-205ENST00000399240 PIK3C2BO00750 1634 aa35.74■■■■□ 3.31
RUNX1-205ENST00000399240 TNRQ92752 1358 aa35.71■■■■□ 3.31
RUNX1-205ENST00000399240 CCDC144AA2RUR9 1427 aa35.69■■■■□ 3.3
RUNX1-205ENST00000399240 SIN3AQ96ST3 1273 aa35.68■■■■□ 3.3
RUNX1-205ENST00000399240 CLSPNQ9HAW4 1339 aa35.67■■■■□ 3.3
RUNX1-205ENST00000399240 MYO3AQ8NEV4 1616 aa35.65■■■■□ 3.3
RUNX1-205ENST00000399240 SETD1BQ9UPS6 1966 aaKnown RBP35.64■■■■□ 3.3
RUNX1-205ENST00000399240 IDI1Q13907 227 aa35.64■■■■□ 3.3
RUNX1-205ENST00000399240 KIF1BO60333 1816 aa35.62■■■■□ 3.29
RUNX1-205ENST00000399240 SLC52A1Q9NWF4 448 aa35.62■■■■□ 3.29
RUNX1-205ENST00000399240 MYO5BQ9ULV0 1848 aa35.58■■■■□ 3.29
RUNX1-205ENST00000399240 NEUROD1Q13562 356 aa35.58■■■■□ 3.29
RUNX1-205ENST00000399240 NLRP1Q9C000 1473 aa35.58■■■■□ 3.29
RUNX1-205ENST00000399240 TMEM131LA2VDJ0 1609 aa35.54■■■■□ 3.28
RUNX1-205ENST00000399240 UBR1Q8IWV7 1749 aa35.52■■■■□ 3.28
RUNX1-205ENST00000399240 ADGRB3O60242 1522 aa35.52■■■■□ 3.28
RUNX1-205ENST00000399240 ZNF142P52746 1687 aaPredicted RBP35.52■■■■□ 3.28
RUNX1-205ENST00000399240 SPATA31E1Q6ZUB1 1445 aa35.51■■■■□ 3.28
RUNX1-205ENST00000399240 CEP170BQ9Y4F5 1589 aaPredicted RBP35.51■■■■□ 3.28
RUNX1-205ENST00000399240 KDM5AP29375 1690 aaKnown RBP35.49■■■■□ 3.27
RUNX1-205ENST00000399240 A2ML1A8K2U0 1454 aa35.48■■■■□ 3.27
RUNX1-205ENST00000399240 CHGAP10645 457 aaKnown RBP35.48■■■■□ 3.27
RUNX1-205ENST00000399240 NEURL4Q96JN8 1562 aa35.47■■■■□ 3.27
RUNX1-205ENST00000399240 UHRF1BP1Q6BDS2 1440 aa35.46■■■■□ 3.27
RUNX1-205ENST00000399240 RGL3Q3MIN7 710 aa35.42■■■■□ 3.26
RUNX1-205ENST00000399240 STAG3Q9UJ98 1225 aa35.42■■■■□ 3.26
RUNX1-205ENST00000399240 IFT172Q9UG01 1749 aa35.37■■■■□ 3.25
RUNX1-205ENST00000399240 ZNF326Q5BKZ1 582 aaKnown RBP35.35■■■■□ 3.25
RUNX1-205ENST00000399240 PPLO60437 1756 aa35.35■■■■□ 3.25
RUNX1-205ENST00000399240 TONSLQ96HA7 1378 aa35.35■■■■□ 3.25
RUNX1-205ENST00000399240 L3MBTL2Q969R5 705 aa35.34■■■■□ 3.25
RUNX1-205ENST00000399240 NEXMIFQ5QGS0 1516 aa35.33■■■■□ 3.25
RUNX1-205ENST00000399240 LMTK3Q96Q04 1460 aa35.32■■■■□ 3.25
RUNX1-205ENST00000399240 THEMISQ8N1K5 641 aaPredicted RBP35.3■■■■□ 3.24
RUNX1-205ENST00000399240 TMEM2Q9UHN6 1383 aa35.28■■■■□ 3.24
RUNX1-205ENST00000399240 SLIT1O75093 1534 aa35.28■■■■□ 3.24
RUNX1-205ENST00000399240 ZFYVE9O95405 1425 aa35.27■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms