RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 KIF15Q9NS87 1388 aa18.67■□□□□ 0.58
RPRD1A-202ENST00000399022 ANKRD50Q9ULJ7 1429 aa18.67■□□□□ 0.58
RPRD1A-202ENST00000399022 RRP1P56182 461 aaKnown RBP18.67■□□□□ 0.58
RPRD1A-202ENST00000399022 CCDC146Q8IYE0 955 aa18.66■□□□□ 0.58
RPRD1A-202ENST00000399022 PRG4Q92954 1404 aaPredicted RBP18.66■□□□□ 0.58
RPRD1A-202ENST00000399022 MLECQ14165 292 aa18.66■□□□□ 0.58
RPRD1A-202ENST00000399022 MYBBP1AQ9BQG0 1328 aaKnown RBP18.65■□□□□ 0.58
RPRD1A-202ENST00000399022 SRPK2P78362 688 aaKnown RBP18.65■□□□□ 0.58
RPRD1A-202ENST00000399022 CDK13Q14004 1512 aaKnown RBP18.65■□□□□ 0.58
RPRD1A-202ENST00000399022 FTSJ3Q8IY81 847 aaKnown RBP18.65■□□□□ 0.58
RPRD1A-202ENST00000399022 CNTLNQ9NXG0 1405 aa18.64■□□□□ 0.58
RPRD1A-202ENST00000399022 MS4A1P11836 297 aa18.64■□□□□ 0.57
RPRD1A-202ENST00000399022 MSNP26038 577 aaKnown RBP18.63■□□□□ 0.57
RPRD1A-202ENST00000399022 MAPK8IP3Q9UPT6 1336 aa18.63■□□□□ 0.57
RPRD1A-202ENST00000399022 EHBP1L1Q8N3D4 1523 aa18.62■□□□□ 0.57
RPRD1A-202ENST00000399022 PKNOX2Q96KN3 472 aa18.61■□□□□ 0.57
RPRD1A-202ENST00000399022 HSP90AB1P08238 724 aaKnown RBP18.61■□□□□ 0.57
RPRD1A-202ENST00000399022 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
RPRD1A-202ENST00000399022 HSCBQ8IWL3 235 aa18.6■□□□□ 0.57
RPRD1A-202ENST00000399022 TRAK1Q9UPV9 953 aa18.59■□□□□ 0.57
RPRD1A-202ENST00000399022 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.59■□□□□ 0.57
RPRD1A-202ENST00000399022 FAM161AQ3B820 660 aa18.59■□□□□ 0.57
RPRD1A-202ENST00000399022 CRBNQ96SW2 442 aa18.57■□□□□ 0.56
RPRD1A-202ENST00000399022 C11orf95C9JLR9 678 aaPredicted RBP18.57■□□□□ 0.56
RPRD1A-202ENST00000399022 EPRSP07814 1512 aaKnown RBP18.57■□□□□ 0.56
RPRD1A-202ENST00000399022 PDE3BQ13370 1112 aa18.56■□□□□ 0.56
RPRD1A-202ENST00000399022 MIA2Q96PC5 1412 aa18.56■□□□□ 0.56
RPRD1A-202ENST00000399022 MRC2Q9UBG0 1479 aa18.56■□□□□ 0.56
RPRD1A-202ENST00000399022 U2AF1L5P0DN76 240 aaPredicted RBP18.55■□□□□ 0.56
RPRD1A-202ENST00000399022 U2AF1Q01081 240 aaKnown RBP eCLIP18.55■□□□□ 0.561e-6■■■□□ 15.4
RPRD1A-202ENST00000399022 C14orf37Q86TY3 774 aa18.55■□□□□ 0.56
RPRD1A-202ENST00000399022 URB2Q14146 1524 aaKnown RBP18.55■□□□□ 0.56
RPRD1A-202ENST00000399022 NBPF1Q3BBV0 1214 aa18.55■□□□□ 0.56
RPRD1A-202ENST00000399022 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
RPRD1A-202ENST00000399022 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
RPRD1A-202ENST00000399022 MAP3K1Q13233 1512 aa18.54■□□□□ 0.56
RPRD1A-202ENST00000399022 ZBTB7CA1YPR0 619 aa18.54■□□□□ 0.56
RPRD1A-202ENST00000399022 AKNAQ7Z591 1439 aa18.53■□□□□ 0.56
RPRD1A-202ENST00000399022 FRAT2O75474 233 aaPredicted RBP18.53■□□□□ 0.56
RPRD1A-202ENST00000399022 DAPK1P53355 1430 aa18.53■□□□□ 0.56
RPRD1A-202ENST00000399022 TPRNQ4KMQ1 711 aa18.53■□□□□ 0.56
RPRD1A-202ENST00000399022 SUPT6HQ7KZ85 1726 aaKnown RBP18.52■□□□□ 0.56
RPRD1A-202ENST00000399022 SOX12O15370 315 aa18.52■□□□□ 0.56
RPRD1A-202ENST00000399022 AFAP1Q8N556 730 aa18.52■□□□□ 0.56
RPRD1A-202ENST00000399022 TROQ12816 1431 aaPredicted RBP18.52■□□□□ 0.56
RPRD1A-202ENST00000399022 WASHC2CQ9Y4E1 1318 aa18.52■□□□□ 0.55
RPRD1A-202ENST00000399022 CENPQQ7L2Z9 268 aaPredicted RBP18.51■□□□□ 0.55
RPRD1A-202ENST00000399022 RRP7AQ9Y3A4 280 aaKnown RBP18.51■□□□□ 0.55
RPRD1A-202ENST00000399022 PTPRKQ15262 1439 aa18.5■□□□□ 0.55
RPRD1A-202ENST00000399022 IFT140Q96RY7 1462 aa18.49■□□□□ 0.55
RPRD1A-202ENST00000399022 HECW1Q76N89 1606 aa18.49■□□□□ 0.55
RPRD1A-202ENST00000399022 CLUAP1Q96AJ1 413 aa18.49■□□□□ 0.55
RPRD1A-202ENST00000399022 BACH2Q9BYV9 841 aa18.49■□□□□ 0.55
RPRD1A-202ENST00000399022 MAPKBP1O60336 1514 aa18.48■□□□□ 0.55
RPRD1A-202ENST00000399022 KIAA1107Q9UPP5 1409 aa18.47■□□□□ 0.55
RPRD1A-202ENST00000399022 EIF3AQ14152 1382 aaKnown RBP18.47■□□□□ 0.55
RPRD1A-202ENST00000399022 PLCB2Q00722 1185 aa18.47■□□□□ 0.55
RPRD1A-202ENST00000399022 GBP4Q96PP9 640 aa18.46■□□□□ 0.55
RPRD1A-202ENST00000399022 C9orf84Q5VXU9 1444 aa18.46■□□□□ 0.55
RPRD1A-202ENST00000399022 FAM43AQ8N2R8 423 aa18.46■□□□□ 0.55
RPRD1A-202ENST00000399022 APAF1O14727 1248 aa18.46■□□□□ 0.54
RPRD1A-202ENST00000399022 UBE2Q2Q8WVN8 375 aa18.46■□□□□ 0.54
RPRD1A-202ENST00000399022 IQGAP2Q13576 1575 aa18.45■□□□□ 0.54
RPRD1A-202ENST00000399022 MFAP1P55081 439 aaKnown RBP18.45■□□□□ 0.54
RPRD1A-202ENST00000399022 CUL7Q14999 1698 aa18.45■□□□□ 0.54
RPRD1A-202ENST00000399022 LAMC3Q9Y6N6 1575 aa18.45■□□□□ 0.54
RPRD1A-202ENST00000399022 AMER1Q5JTC6 1135 aaPredicted RBP18.44■□□□□ 0.54
RPRD1A-202ENST00000399022 CDCA7LQ96GN5 454 aa18.44■□□□□ 0.54
RPRD1A-202ENST00000399022 KIAA0586Q9BVV6 1533 aa18.44■□□□□ 0.54
RPRD1A-202ENST00000399022 PTPN23Q9H3S7 1636 aa18.44■□□□□ 0.54
RPRD1A-202ENST00000399022 PLB1Q6P1J6 1458 aa18.44■□□□□ 0.54
RPRD1A-202ENST00000399022 BCL2L13Q9BXK5 485 aa18.43■□□□□ 0.54
RPRD1A-202ENST00000399022 ANKRD30BQ9BXX2 1392 aa18.42■□□□□ 0.54
RPRD1A-202ENST00000399022 ABCC5O15440 1437 aa18.42■□□□□ 0.54
RPRD1A-202ENST00000399022 CDK11BP21127 795 aaKnown RBP18.41■□□□□ 0.54
RPRD1A-202ENST00000399022 ZNF608Q9ULD9 1512 aaPredicted RBP18.41■□□□□ 0.54
RPRD1A-202ENST00000399022 SYNJ2O15056 1496 aa18.41■□□□□ 0.54
RPRD1A-202ENST00000399022 PNISRQ8TF01 805 aaKnown RBP18.39■□□□□ 0.53
RPRD1A-202ENST00000399022 ARHGAP5Q13017 1502 aa18.39■□□□□ 0.53
RPRD1A-202ENST00000399022 HDGFL2Q7Z4V5 671 aaPredicted RBP18.39■□□□□ 0.53
RPRD1A-202ENST00000399022 ADAMTS8Q9UP79 889 aa18.38■□□□□ 0.53
RPRD1A-202ENST00000399022 FOXD4L1Q9NU39 408 aa18.38■□□□□ 0.53
RPRD1A-202ENST00000399022 CFAP70Q5T0N1 1121 aa18.37■□□□□ 0.53
RPRD1A-202ENST00000399022 CENPJQ9HC77 1338 aaPredicted RBP18.37■□□□□ 0.53
RPRD1A-202ENST00000399022 RWDD1Q9H446 243 aaPredicted RBP18.37■□□□□ 0.53
RPRD1A-202ENST00000399022 ROCK1Q13464 1354 aa18.36■□□□□ 0.53
RPRD1A-202ENST00000399022 ARHGEF11O15085 1522 aa18.35■□□□□ 0.53
RPRD1A-202ENST00000399022 TMEM132EQ6IEE7 984 aa18.35■□□□□ 0.53
RPRD1A-202ENST00000399022 ITPRIPQ8IWB1 547 aa18.34■□□□□ 0.53
RPRD1A-202ENST00000399022 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.34■□□□□ 0.539e-7■■□□□ 11.7
RPRD1A-202ENST00000399022 FAM13BQ9NYF5 915 aa18.34■□□□□ 0.53
RPRD1A-202ENST00000399022 BRD4O60885 1362 aaPredicted RBP18.34■□□□□ 0.53
RPRD1A-202ENST00000399022 SMC4Q9NTJ3 1288 aa18.33■□□□□ 0.53
RPRD1A-202ENST00000399022 PMFBP1Q8TBY8 1022 aa18.33■□□□□ 0.52
RPRD1A-202ENST00000399022 DDX11L8A8MPP1 907 aa18.33■□□□□ 0.52
RPRD1A-202ENST00000399022 NUTM2FA1L443 756 aa18.32■□□□□ 0.52
RPRD1A-202ENST00000399022 COG6Q9Y2V7 657 aa18.32■□□□□ 0.52
RPRD1A-202ENST00000399022 LMOD2Q6P5Q4 547 aa18.32■□□□□ 0.52
RPRD1A-202ENST00000399022 THOC2Q8NI27 1593 aaKnown RBP18.32■□□□□ 0.52
RPRD1A-202ENST00000399022 SKAP1Q86WV1 359 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms