RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 PLEKHH2Q8IVE3 1493 aa34.92■■■■□ 3.18
COL13A1-203ENST00000398969 ARHGEF12Q9NZN5 1544 aa34.91■■■■□ 3.18
COL13A1-203ENST00000398969 KIF15Q9NS87 1388 aa34.91■■■■□ 3.18
COL13A1-203ENST00000398969 WDR7Q9Y4E6 1490 aa34.89■■■■□ 3.18
COL13A1-203ENST00000398969 EFCAB2Q5VUJ9 269 aa34.86■■■■□ 3.17
COL13A1-203ENST00000398969 POLR3GLQ9BT43 218 aa34.86■■■■□ 3.17
COL13A1-203ENST00000398969 MAST1Q9Y2H9 1570 aa34.84■■■■□ 3.17
COL13A1-203ENST00000398969 ROCK2O75116 1388 aaKnown RBP34.83■■■■□ 3.17
COL13A1-203ENST00000398969 SMG6Q86US8 1419 aaKnown RBP34.81■■■■□ 3.16
COL13A1-203ENST00000398969 CARD11Q9BXL7 1154 aa34.79■■■■□ 3.16
COL13A1-203ENST00000398969 FANCIQ9NVI1 1328 aa34.79■■■■□ 3.16
COL13A1-203ENST00000398969 ARAP3Q8WWN8 1544 aa34.78■■■■□ 3.16
COL13A1-203ENST00000398969 CNGB1Q14028 1251 aaPredicted RBP34.77■■■■□ 3.16
COL13A1-203ENST00000398969 ABCC1P33527 1531 aa34.75■■■■□ 3.15
COL13A1-203ENST00000398969 ASXL2Q76L83 1435 aa34.75■■■■□ 3.15
COL13A1-203ENST00000398969 MSH5O43196 834 aa34.75■■■■□ 3.15
COL13A1-203ENST00000398969 B4GALNT3Q6L9W6 998 aa34.72■■■■□ 3.15
COL13A1-203ENST00000398969 ABCA9Q8IUA7 1624 aa34.71■■■■□ 3.15
COL13A1-203ENST00000398969 PLXNC1O60486 1568 aa34.71■■■■□ 3.15
COL13A1-203ENST00000398969 KDM2AQ9Y2K7 1162 aa34.69■■■■□ 3.14
COL13A1-203ENST00000398969 NUDCQ9Y266 331 aa34.69■■■■□ 3.14
COL13A1-203ENST00000398969 NPM1P06748 294 aaKnown RBP eCLIP34.67■■■■□ 3.14
COL13A1-203ENST00000398969 PNISRQ8TF01 805 aaKnown RBP34.67■■■■□ 3.14
COL13A1-203ENST00000398969 ST20-MTHFSA0A0A6YYL1 179 aa34.67■■■■□ 3.14
COL13A1-203ENST00000398969 DCAF11Q8TEB1 546 aa34.67■■■■□ 3.14
COL13A1-203ENST00000398969 TRAPPC8Q9Y2L5 1435 aa34.67■■■■□ 3.14
COL13A1-203ENST00000398969 FAM135AQ9P2D6 1515 aa34.66■■■■□ 3.14
COL13A1-203ENST00000398969 E9PCH4 1651 aa34.62■■■■□ 3.13
COL13A1-203ENST00000398969 RNF123Q5XPI4 1314 aa34.62■■■■□ 3.13
COL13A1-203ENST00000398969 TMC1Q8TDI8 760 aa34.61■■■■□ 3.13
COL13A1-203ENST00000398969 FANCAO15360 1455 aa34.61■■■■□ 3.13
COL13A1-203ENST00000398969 DUOX2Q9NRD8 1548 aa34.59■■■■□ 3.13
COL13A1-203ENST00000398969 KTN1Q86UP2 1357 aaKnown RBP34.58■■■■□ 3.13
COL13A1-203ENST00000398969 UNC13BO14795 1591 aa34.56■■■■□ 3.12
COL13A1-203ENST00000398969 LRPPRCP42704 1394 aaKnown RBP34.55■■■■□ 3.12
COL13A1-203ENST00000398969 AFAP1Q8N556 730 aa34.55■■■■□ 3.12
COL13A1-203ENST00000398969 TRPM1Q7Z4N2 1603 aa34.55■■■■□ 3.12
COL13A1-203ENST00000398969 BRD4O60885 1362 aaPredicted RBP34.54■■■■□ 3.12
COL13A1-203ENST00000398969 MYBBP1AQ9BQG0 1328 aaKnown RBP34.54■■■■□ 3.12
COL13A1-203ENST00000398969 PRAG1Q86YV5 1406 aa34.53■■■■□ 3.12
COL13A1-203ENST00000398969 ERBINQ96RT1 1412 aa34.53■■■■□ 3.12
COL13A1-203ENST00000398969 RALBP1Q15311 655 aa34.53■■■■□ 3.12
COL13A1-203ENST00000398969 SPAG9O60271 1321 aaKnown RBP34.53■■■■□ 3.12
COL13A1-203ENST00000398969 CCDC144AA2RUR9 1427 aa34.52■■■■□ 3.12
COL13A1-203ENST00000398969 RTEL1-TNFRSF6BF6WH68 1400 aa34.52■■■■□ 3.12
COL13A1-203ENST00000398969 ADGRL1O94910 1474 aa34.47■■■■□ 3.11
COL13A1-203ENST00000398969 ZFYVE16Q7Z3T8 1539 aa34.47■■■■□ 3.11
COL13A1-203ENST00000398969 PLA2R1Q13018 1463 aa34.46■■■■□ 3.11
COL13A1-203ENST00000398969 SENP3-EIF4A1A0A087X0R7 540 aa34.45■■■■□ 3.11
COL13A1-203ENST00000398969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.45■■■■□ 3.11
COL13A1-203ENST00000398969 SCAPERQ9BY12 1400 aa34.44■■■■□ 3.1
COL13A1-203ENST00000398969 IQGAP3Q86VI3 1631 aa34.43■■■■□ 3.1
COL13A1-203ENST00000398969 MAGI2Q86UL8 1455 aa34.42■■■■□ 3.1
COL13A1-203ENST00000398969 GPRASP1Q5JY77 1395 aa34.41■■■■□ 3.1
COL13A1-203ENST00000398969 A2MP01023 1474 aa34.41■■■■□ 3.1
COL13A1-203ENST00000398969 LAMC1P11047 1609 aa34.38■■■■□ 3.09
COL13A1-203ENST00000398969 PARD3Q8TEW0 1356 aa34.38■■■■□ 3.09
COL13A1-203ENST00000398969 INO80Q9ULG1 1556 aaPredicted RBP34.38■■■■□ 3.09
COL13A1-203ENST00000398969 CD109Q6YHK3 1445 aa34.38■■■■□ 3.09
COL13A1-203ENST00000398969 ATP7AQ04656 1500 aa34.37■■■■□ 3.09
COL13A1-203ENST00000398969 NBPF1Q3BBV0 1214 aa34.37■■■■□ 3.09
COL13A1-203ENST00000398969 RGL3Q3MIN7 710 aa34.37■■■■□ 3.09
COL13A1-203ENST00000398969 ERICH6Q7L0X2 663 aa34.37■■■■□ 3.09
COL13A1-203ENST00000398969 CCDC136Q96JN2 1154 aa34.37■■■■□ 3.09
COL13A1-203ENST00000398969 PRDM15P57071 1507 aaPredicted RBP34.34■■■■□ 3.09
COL13A1-203ENST00000398969 NLRP13Q86W25 1043 aa34.34■■■■□ 3.09
COL13A1-203ENST00000398969 COL17A1Q9UMD9 1497 aaPredicted RBP34.33■■■■□ 3.09
COL13A1-203ENST00000398969 PER1O15534 1290 aaPredicted RBP34.3■■■■□ 3.08
COL13A1-203ENST00000398969 CYB5RLQ6IPT4 315 aa34.3■■■■□ 3.08
COL13A1-203ENST00000398969 EIF2AK4Q9P2K8 1649 aaKnown RBP34.29■■■■□ 3.08
COL13A1-203ENST00000398969 CFAP74Q9C0B2 1584 aa34.28■■■■□ 3.08
COL13A1-203ENST00000398969 ATP10AO60312 1499 aa34.27■■■■□ 3.08
COL13A1-203ENST00000398969 TESK2Q96S53 571 aa34.26■■■■□ 3.07
COL13A1-203ENST00000398969 MYT1LQ9UL68 1186 aa34.26■■■■□ 3.07
COL13A1-203ENST00000398969 DISP3Q9P2K9 1392 aa34.25■■■■□ 3.07
COL13A1-203ENST00000398969 RIMBP3CA6NJZ7 1639 aa34.25■■■■□ 3.07
COL13A1-203ENST00000398969 RIMBP3BA6NNM3 1639 aa34.25■■■■□ 3.07
COL13A1-203ENST00000398969 RIMBP3Q9UFD9 1639 aa34.25■■■■□ 3.07
COL13A1-203ENST00000398969 ZNF518AQ6AHZ1 1483 aa34.25■■■■□ 3.07
COL13A1-203ENST00000398969 DEPDC5O75140 1603 aa34.22■■■■□ 3.07
COL13A1-203ENST00000398969 WASHC2CQ9Y4E1 1318 aa34.21■■■■□ 3.07
COL13A1-203ENST00000398969 RRP1P56182 461 aaKnown RBP34.2■■■■□ 3.07
COL13A1-203ENST00000398969 KIDINS220Q9ULH0 1771 aa34.2■■■■□ 3.07
COL13A1-203ENST00000398969 PDE3BQ13370 1112 aa34.18■■■■□ 3.06
COL13A1-203ENST00000398969 POGZQ7Z3K3 1410 aa34.17■■■■□ 3.06
COL13A1-203ENST00000398969 RCAN3Q9UKA8 241 aa34.15■■■■□ 3.06
COL13A1-203ENST00000398969 RNF17Q9BXT8 1623 aaKnown RBP34.15■■■■□ 3.06
COL13A1-203ENST00000398969 KIF3BO15066 747 aa34.14■■■■□ 3.06
COL13A1-203ENST00000398969 NEO1Q92859 1461 aa34.13■■■■□ 3.05
COL13A1-203ENST00000398969 SALL2Q9Y467 1007 aaPredicted RBP34.13■■■■□ 3.05
COL13A1-203ENST00000398969 CC2D1BQ5T0F9 858 aaKnown RBP34.12■■■■□ 3.05
COL13A1-203ENST00000398969 PANK3Q9H999 370 aa34.12■■■■□ 3.05
COL13A1-203ENST00000398969 INSRP06213 1382 aa34.12■■■■□ 3.05
COL13A1-203ENST00000398969 TMF1P82094 1093 aa34.11■■■■□ 3.05
COL13A1-203ENST00000398969 ZMYM4Q5VZL5 1548 aa34.11■■■■□ 3.05
COL13A1-203ENST00000398969 VWDEQ8N2E2 1590 aa34.09■■■■□ 3.05
COL13A1-203ENST00000398969 BLMP54132 1417 aaPredicted RBP34.09■■■■□ 3.05
COL13A1-203ENST00000398969 KANK1Q14678 1352 aa34.09■■■■□ 3.05
COL13A1-203ENST00000398969 MLH3Q9UHC1 1453 aa34.09■■■■□ 3.05
COL13A1-203ENST00000398969 EXOC6Q8TAG9 804 aa34.07■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 373.9 ms