RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 DEPDC5O75140 1603 aa33.27■■■□□ 2.92
CDH23-206ENST00000398842 TRHP20396 242 aaPredicted RBP33.26■■■□□ 2.92
CDH23-206ENST00000398842 EIF2AK4Q9P2K8 1649 aaKnown RBP33.25■■■□□ 2.91
CDH23-206ENST00000398842 L3MBTL2Q969R5 705 aa33.25■■■□□ 2.91
CDH23-206ENST00000398842 MLH3Q9UHC1 1453 aa33.25■■■□□ 2.91
CDH23-206ENST00000398842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.24■■■□□ 2.91
CDH23-206ENST00000398842 DHX29Q7Z478 1369 aaKnown RBP33.24■■■□□ 2.91
CDH23-206ENST00000398842 HECW2Q9P2P5 1572 aa33.23■■■□□ 2.91
CDH23-206ENST00000398842 MYT1LQ9UL68 1186 aa33.21■■■□□ 2.91
CDH23-206ENST00000398842 PPRC1Q5VV67 1664 aaKnown RBP33.2■■■□□ 2.91
CDH23-206ENST00000398842 RICTORQ6R327 1708 aa33.18■■■□□ 2.9
CDH23-206ENST00000398842 VWDEQ8N2E2 1590 aa33.14■■■□□ 2.9
CDH23-206ENST00000398842 A2MP01023 1474 aa33.13■■■□□ 2.89
CDH23-206ENST00000398842 ABCA6Q8N139 1617 aa33.12■■■□□ 2.89
CDH23-206ENST00000398842 MROH1Q8NDA8 1641 aa33.12■■■□□ 2.89
CDH23-206ENST00000398842 PLA2R1Q13018 1463 aa33.11■■■□□ 2.89
CDH23-206ENST00000398842 PRDM15P57071 1507 aaPredicted RBP33.11■■■□□ 2.89
CDH23-206ENST00000398842 RAPGEF3O95398 923 aa33.09■■■□□ 2.89
CDH23-206ENST00000398842 FRMPD1Q5SYB0 1578 aa33.09■■■□□ 2.89
CDH23-206ENST00000398842 ATP10AO60312 1499 aa33.09■■■□□ 2.89
CDH23-206ENST00000398842 KIF3BO15066 747 aa33.09■■■□□ 2.89
CDH23-206ENST00000398842 E9PCH4 1651 aa33.07■■■□□ 2.88
CDH23-206ENST00000398842 TET3O43151 1660 aa33.07■■■□□ 2.88
CDH23-206ENST00000398842 RNF17Q9BXT8 1623 aaKnown RBP33.06■■■□□ 2.88
CDH23-206ENST00000398842 BCORL1Q5H9F3 1711 aa33.05■■■□□ 2.88
CDH23-206ENST00000398842 KANK1Q14678 1352 aa33.04■■■□□ 2.88
CDH23-206ENST00000398842 CCDC144AA2RUR9 1427 aa33.03■■■□□ 2.88
CDH23-206ENST00000398842 DIP2CQ9Y2E4 1556 aa33.02■■■□□ 2.88
CDH23-206ENST00000398842 NBPF8Q3BBV2 869 aa33.02■■■□□ 2.88
CDH23-206ENST00000398842 ZMYM4Q5VZL5 1548 aa32.98■■■□□ 2.87
CDH23-206ENST00000398842 SPHKAPQ2M3C7 1700 aa32.94■■■□□ 2.86
CDH23-206ENST00000398842 LMTK2Q8IWU2 1503 aa32.94■■■□□ 2.86
CDH23-206ENST00000398842 UHRF1BP1Q6BDS2 1440 aa32.94■■■□□ 2.86
CDH23-206ENST00000398842 PTPRTO14522 1441 aa32.93■■■□□ 2.86
CDH23-206ENST00000398842 TRPM2O94759 1503 aa32.92■■■□□ 2.86
CDH23-206ENST00000398842 YEATS2Q9ULM3 1422 aa32.91■■■□□ 2.86
CDH23-206ENST00000398842 CEP152O94986 1710 aa32.9■■■□□ 2.86
CDH23-206ENST00000398842 HIRIP3Q9BW71 556 aaPredicted RBP32.9■■■□□ 2.86
CDH23-206ENST00000398842 COL17A1Q9UMD9 1497 aaPredicted RBP32.9■■■□□ 2.86
CDH23-206ENST00000398842 EFCAB6Q5THR3 1501 aa32.89■■■□□ 2.86
CDH23-206ENST00000398842 HSPA5P11021 654 aaKnown RBP32.83■■■□□ 2.85
CDH23-206ENST00000398842 EIF4G2P78344 907 aaKnown RBP eCLIP32.83■■■□□ 2.85
CDH23-206ENST00000398842 CLTCL1P53675 1640 aa32.81■■■□□ 2.84
CDH23-206ENST00000398842 DCAF11Q8TEB1 546 aa32.81■■■□□ 2.84
CDH23-206ENST00000398842 MIER1Q8N108 512 aa32.8■■■□□ 2.84
CDH23-206ENST00000398842 RALGAPBQ86X10 1494 aa32.8■■■□□ 2.84
CDH23-206ENST00000398842 SPATA31E1Q6ZUB1 1445 aa32.78■■■□□ 2.84
CDH23-206ENST00000398842 ABCC3O15438 1527 aa32.78■■■□□ 2.84
CDH23-206ENST00000398842 GGT6Q6P531 493 aa32.78■■■□□ 2.84
CDH23-206ENST00000398842 ZNF326Q5BKZ1 582 aaKnown RBP32.76■■■□□ 2.84
CDH23-206ENST00000398842 KDM2AQ9Y2K7 1162 aa32.75■■■□□ 2.83
CDH23-206ENST00000398842 REREQ9P2R6 1566 aa32.75■■■□□ 2.83
CDH23-206ENST00000398842 RGL3Q3MIN7 710 aa32.74■■■□□ 2.83
CDH23-206ENST00000398842 PRAG1Q86YV5 1406 aa32.72■■■□□ 2.83
CDH23-206ENST00000398842 CAMSAP1Q5T5Y3 1602 aa32.71■■■□□ 2.83
CDH23-206ENST00000398842 NEURL4Q96JN8 1562 aa32.71■■■□□ 2.83
CDH23-206ENST00000398842 ZC3H13Q5T200 1668 aaKnown RBP32.71■■■□□ 2.83
CDH23-206ENST00000398842 NPATQ14207 1427 aa32.69■■■□□ 2.82
CDH23-206ENST00000398842 TRPM1Q7Z4N2 1603 aa32.69■■■□□ 2.82
CDH23-206ENST00000398842 DDX10Q13206 875 aaKnown RBP32.68■■■□□ 2.82
CDH23-206ENST00000398842 WASHC2CQ9Y4E1 1318 aa32.68■■■□□ 2.82
CDH23-206ENST00000398842 AGLP35573 1532 aa32.65■■■□□ 2.82
CDH23-206ENST00000398842 UGGT1Q9NYU2 1555 aa32.64■■■□□ 2.82
CDH23-206ENST00000398842 KIF1BO60333 1816 aa32.63■■■□□ 2.81
CDH23-206ENST00000398842 ARHGEF40Q8TER5 1519 aa32.62■■■□□ 2.81
CDH23-206ENST00000398842 USP47Q96K76 1375 aa32.62■■■□□ 2.81
CDH23-206ENST00000398842 POLR1AO95602 1720 aaPredicted RBP32.6■■■□□ 2.81
CDH23-206ENST00000398842 ARHGAP31Q2M1Z3 1444 aa32.6■■■□□ 2.81
CDH23-206ENST00000398842 CFAP65Q6ZU64 1925 aaKnown RBP32.6■■■□□ 2.81
CDH23-206ENST00000398842 WASHC2AQ641Q2 1341 aa32.6■■■□□ 2.81
CDH23-206ENST00000398842 SIGLEC1Q9BZZ2 1709 aa32.59■■■□□ 2.81
CDH23-206ENST00000398842 CNTLNQ9NXG0 1405 aa32.59■■■□□ 2.81
CDH23-206ENST00000398842 CARD11Q9BXL7 1154 aa32.57■■■□□ 2.8
CDH23-206ENST00000398842 NOS1P29475 1434 aa32.56■■■□□ 2.8
CDH23-206ENST00000398842 LAMC1P11047 1609 aa32.56■■■□□ 2.8
CDH23-206ENST00000398842 STAC3Q96MF2 364 aa32.55■■■□□ 2.8
CDH23-206ENST00000398842 MADDQ8WXG6 1647 aa32.55■■■□□ 2.8
CDH23-206ENST00000398842 ROCK2O75116 1388 aaKnown RBP32.55■■■□□ 2.8
CDH23-206ENST00000398842 GPRASP1Q5JY77 1395 aa32.54■■■□□ 2.8
CDH23-206ENST00000398842 MROH2AA6NES4 1674 aa32.54■■■□□ 2.8
CDH23-206ENST00000398842 C11orf95C9JLR9 678 aaPredicted RBP32.53■■■□□ 2.8
CDH23-206ENST00000398842 CCDC7Q96M83 1385 aa32.51■■■□□ 2.79
CDH23-206ENST00000398842 IFT172Q9UG01 1749 aa32.51■■■□□ 2.79
CDH23-206ENST00000398842 ADGRB3O60242 1522 aa32.51■■■□□ 2.79
CDH23-206ENST00000398842 SYNMO15061 1565 aa32.49■■■□□ 2.79
CDH23-206ENST00000398842 PIK3C2BO00750 1634 aa32.49■■■□□ 2.79
CDH23-206ENST00000398842 PPP6R1Q9UPN7 881 aa32.47■■■□□ 2.79
CDH23-206ENST00000398842 NBPF1Q3BBV0 1214 aa32.47■■■□□ 2.79
CDH23-206ENST00000398842 MYOM2P54296 1465 aa32.45■■■□□ 2.79
CDH23-206ENST00000398842 PREX1Q8TCU6 1659 aa32.44■■■□□ 2.78
CDH23-206ENST00000398842 KIF7Q2M1P5 1343 aa32.43■■■□□ 2.78
CDH23-206ENST00000398842 KIAA1210Q9ULL0 1709 aa32.4■■■□□ 2.78
CDH23-206ENST00000398842 CLTCQ00610 1675 aaKnown RBP32.39■■■□□ 2.78
CDH23-206ENST00000398842 ST20-MTHFSA0A0A6YYL1 179 aa32.37■■■□□ 2.77
CDH23-206ENST00000398842 PPLO60437 1756 aa32.37■■■□□ 2.77
CDH23-206ENST00000398842 NRXN1Q9ULB1 1477 aa32.36■■■□□ 2.77
CDH23-206ENST00000398842 ARID4BQ4LE39 1312 aaPredicted RBP32.36■■■□□ 2.77
CDH23-206ENST00000398842 MLECQ14165 292 aa32.34■■■□□ 2.77
CDH23-206ENST00000398842 IQGAP1P46940 1657 aa32.33■■■□□ 2.77
CDH23-206ENST00000398842 CHGAP10645 457 aaKnown RBP32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms