RNA–Protein interactions for RNA: ENST00000398776.1

CAPN11-201, Transcript of calpain 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN11, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-201ENST00000398776 UHRF1BP1Q6BDS2 1440 aa13.51□□□□□ -0.25
CAPN11-201ENST00000398776 UNC13BO14795 1591 aa13.51□□□□□ -0.25
CAPN11-201ENST00000398776 CNTLNQ9NXG0 1405 aa13.51□□□□□ -0.25
CAPN11-201ENST00000398776 PPP4R2Q9NY27 417 aa13.5□□□□□ -0.25
CAPN11-201ENST00000398776 B4GALNT3Q6L9W6 998 aa13.5□□□□□ -0.25
CAPN11-201ENST00000398776 CCDC7Q96M83 1385 aa13.5□□□□□ -0.25
CAPN11-201ENST00000398776 PLCH2O75038 1416 aa13.49□□□□□ -0.25
CAPN11-201ENST00000398776 ARAP3Q8WWN8 1544 aa13.49□□□□□ -0.25
CAPN11-201ENST00000398776 FAM135AQ9P2D6 1515 aa13.48□□□□□ -0.25
CAPN11-201ENST00000398776 DUOX2Q9NRD8 1548 aa13.46□□□□□ -0.25
CAPN11-201ENST00000398776 PAK3O75914 559 aaPredicted RBP13.46□□□□□ -0.26
CAPN11-201ENST00000398776 CCDC136Q96JN2 1154 aa13.46□□□□□ -0.26
CAPN11-201ENST00000398776 RALGAPBQ86X10 1494 aa13.46□□□□□ -0.26
CAPN11-201ENST00000398776 IQGAP3Q86VI3 1631 aa13.45□□□□□ -0.26
CAPN11-201ENST00000398776 ARID4BQ4LE39 1312 aaPredicted RBP13.45□□□□□ -0.26
CAPN11-201ENST00000398776 ABCC1P33527 1531 aa13.45□□□□□ -0.26
CAPN11-201ENST00000398776 KDM5CP41229 1560 aa13.44□□□□□ -0.26
CAPN11-201ENST00000398776 IL27Q8NEV9 243 aa13.44□□□□□ -0.26
CAPN11-201ENST00000398776 ERBINQ96RT1 1412 aa13.44□□□□□ -0.26
CAPN11-201ENST00000398776 EFCAB2Q5VUJ9 269 aa13.44□□□□□ -0.26
CAPN11-201ENST00000398776 MAGI2Q86UL8 1455 aa13.44□□□□□ -0.26
CAPN11-201ENST00000398776 C11orf95C9JLR9 678 aaPredicted RBP13.43□□□□□ -0.26
CAPN11-201ENST00000398776 RTL5Q5HYW3 569 aaPredicted RBP13.43□□□□□ -0.26
CAPN11-201ENST00000398776 KIF7Q2M1P5 1343 aa13.42□□□□□ -0.26
CAPN11-201ENST00000398776 USP47Q96K76 1375 aa13.42□□□□□ -0.26
CAPN11-201ENST00000398776 ATP10AO60312 1499 aa13.4□□□□□ -0.26
CAPN11-201ENST00000398776 RTEL1-TNFRSF6BF6WH68 1400 aa13.4□□□□□ -0.26
CAPN11-201ENST00000398776 FAM9BQ8IZU0 186 aa13.4□□□□□ -0.27
CAPN11-201ENST00000398776 CCDC144AA2RUR9 1427 aa13.39□□□□□ -0.27
CAPN11-201ENST00000398776 BCORL1Q5H9F3 1711 aa13.39□□□□□ -0.27
CAPN11-201ENST00000398776 CCDC184Q52MB2 194 aa13.39□□□□□ -0.27
CAPN11-201ENST00000398776 WDR7Q9Y4E6 1490 aa13.38□□□□□ -0.27
CAPN11-201ENST00000398776 IPO9Q96P70 1041 aaKnown RBP13.38□□□□□ -0.27
CAPN11-201ENST00000398776 PRKRIP1Q9H875 184 aaPredicted RBP13.38□□□□□ -0.27
CAPN11-201ENST00000398776 ABCA9Q8IUA7 1624 aa13.37□□□□□ -0.27
CAPN11-201ENST00000398776 ROCK2O75116 1388 aaKnown RBP13.37□□□□□ -0.27
CAPN11-201ENST00000398776 EIF5BO60841 1220 aaKnown RBP13.36□□□□□ -0.27
CAPN11-201ENST00000398776 PLA2R1Q13018 1463 aa13.36□□□□□ -0.27
CAPN11-201ENST00000398776 TRPM1Q7Z4N2 1603 aa13.35□□□□□ -0.27
CAPN11-201ENST00000398776 TRAPPC8Q9Y2L5 1435 aa13.35□□□□□ -0.27
CAPN11-201ENST00000398776 WASHC2CQ9Y4E1 1318 aa13.35□□□□□ -0.27
CAPN11-201ENST00000398776 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.35□□□□□ -0.27
CAPN11-201ENST00000398776 LAMC1P11047 1609 aa13.35□□□□□ -0.27
CAPN11-201ENST00000398776 RTN4Q9NQC3 1192 aaKnown RBP13.34□□□□□ -0.27
CAPN11-201ENST00000398776 ZNF326Q5BKZ1 582 aaKnown RBP13.34□□□□□ -0.27
CAPN11-201ENST00000398776 CARD11Q9BXL7 1154 aa13.34□□□□□ -0.27
CAPN11-201ENST00000398776 ZFYVE16Q7Z3T8 1539 aa13.34□□□□□ -0.27
CAPN11-201ENST00000398776 ANP32AP39687 249 aaKnown RBP13.33□□□□□ -0.27
CAPN11-201ENST00000398776 DCAF11Q8TEB1 546 aa13.33□□□□□ -0.27
CAPN11-201ENST00000398776 USP35Q9P2H5 1018 aa13.33□□□□□ -0.27
CAPN11-201ENST00000398776 PRAG1Q86YV5 1406 aa13.33□□□□□ -0.27
CAPN11-201ENST00000398776 DEPDC5O75140 1603 aa13.33□□□□□ -0.28
CAPN11-201ENST00000398776 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
CAPN11-201ENST00000398776 EIF2AK4Q9P2K8 1649 aaKnown RBP13.32□□□□□ -0.28
CAPN11-201ENST00000398776 SPAG9O60271 1321 aaKnown RBP13.32□□□□□ -0.28
CAPN11-201ENST00000398776 DHX29Q7Z478 1369 aaKnown RBP13.32□□□□□ -0.28
CAPN11-201ENST00000398776 INO80Q9ULG1 1556 aaPredicted RBP13.31□□□□□ -0.28
CAPN11-201ENST00000398776 GPRASP1Q5JY77 1395 aa13.31□□□□□ -0.28
CAPN11-201ENST00000398776 MRS2Q9HD23 443 aa13.31□□□□□ -0.28
CAPN11-201ENST00000398776 FANCAO15360 1455 aa13.31□□□□□ -0.28
CAPN11-201ENST00000398776 A2MP01023 1474 aa13.31□□□□□ -0.28
CAPN11-201ENST00000398776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.3□□□□□ -0.28
CAPN11-201ENST00000398776 KDM2AQ9Y2K7 1162 aa13.29□□□□□ -0.28
CAPN11-201ENST00000398776 ATP7AQ04656 1500 aa13.29□□□□□ -0.28
CAPN11-201ENST00000398776 E9PCH4 1651 aa13.28□□□□□ -0.28
CAPN11-201ENST00000398776 TET3O43151 1660 aa13.27□□□□□ -0.28
CAPN11-201ENST00000398776 ZBED9Q6R2W3 1325 aa13.27□□□□□ -0.28
CAPN11-201ENST00000398776 ASXL2Q76L83 1435 aa13.27□□□□□ -0.29
CAPN11-201ENST00000398776 PRDM15P57071 1507 aaPredicted RBP13.27□□□□□ -0.29
CAPN11-201ENST00000398776 VWDEQ8N2E2 1590 aa13.27□□□□□ -0.29
CAPN11-201ENST00000398776 KTN1Q86UP2 1357 aaKnown RBP13.27□□□□□ -0.29
CAPN11-201ENST00000398776 TRPM2O94759 1503 aa13.27□□□□□ -0.29
CAPN11-201ENST00000398776 STAC3Q96MF2 364 aa13.26□□□□□ -0.29
CAPN11-201ENST00000398776 ST20-MTHFSA0A0A6YYL1 179 aa13.26□□□□□ -0.29
CAPN11-201ENST00000398776 SPHKAPQ2M3C7 1700 aa13.26□□□□□ -0.29
CAPN11-201ENST00000398776 ADGRL1O94910 1474 aa13.26□□□□□ -0.29
CAPN11-201ENST00000398776 AFAP1Q8N556 730 aa13.26□□□□□ -0.29
CAPN11-201ENST00000398776 PTPRTO14522 1441 aa13.25□□□□□ -0.29
CAPN11-201ENST00000398776 CEP152O94986 1710 aa13.25□□□□□ -0.29
CAPN11-201ENST00000398776 NEURL4Q96JN8 1562 aa13.25□□□□□ -0.29
CAPN11-201ENST00000398776 CNGB1Q14028 1251 aaPredicted RBP13.25□□□□□ -0.29
CAPN11-201ENST00000398776 RNF17Q9BXT8 1623 aaKnown RBP13.24□□□□□ -0.29
CAPN11-201ENST00000398776 OSCARQ8IYS5 282 aa13.24□□□□□ -0.29
CAPN11-201ENST00000398776 CFAP74Q9C0B2 1584 aa13.24□□□□□ -0.29
CAPN11-201ENST00000398776 NPM2Q86SE8 214 aaKnown RBP13.23□□□□□ -0.29
CAPN11-201ENST00000398776 SCAPERQ9BY12 1400 aa13.23□□□□□ -0.29
CAPN11-201ENST00000398776 KANK1Q14678 1352 aa13.23□□□□□ -0.29
CAPN11-201ENST00000398776 SENP3-EIF4A1A0A087X0R7 540 aa13.23□□□□□ -0.29
CAPN11-201ENST00000398776 PKNOX2Q96KN3 472 aa13.23□□□□□ -0.29
CAPN11-201ENST00000398776 RGL3Q3MIN7 710 aa13.22□□□□□ -0.29
CAPN11-201ENST00000398776 PLEKHG5O94827 1062 aa13.2□□□□□ -0.3
CAPN11-201ENST00000398776 KIDINS220Q9ULH0 1771 aa13.2□□□□□ -0.3
CAPN11-201ENST00000398776 MADDQ8WXG6 1647 aa13.2□□□□□ -0.3
CAPN11-201ENST00000398776 ZNF518AQ6AHZ1 1483 aa13.2□□□□□ -0.3
CAPN11-201ENST00000398776 COL17A1Q9UMD9 1497 aaPredicted RBP13.2□□□□□ -0.3
CAPN11-201ENST00000398776 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.3
CAPN11-201ENST00000398776 LAS1LQ9Y4W2 734 aaKnown RBP13.2□□□□□ -0.3
CAPN11-201ENST00000398776 RSPH6AQ9H0K4 717 aa13.19□□□□□ -0.3
CAPN11-201ENST00000398776 MROH1Q8NDA8 1641 aa13.19□□□□□ -0.3
CAPN11-201ENST00000398776 RALBP1Q15311 655 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms