RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 TSPOAP1O95153 1857 aa3.43□□□□□ -1.86
CHD9-202ENST00000398510 RAPGEF6Q8TEU7 1601 aa3.43□□□□□ -1.86
CHD9-202ENST00000398510 TPM4P67936 248 aa3.43□□□□□ -1.86
CHD9-202ENST00000398510 TMF1P82094 1093 aa3.43□□□□□ -1.86
CHD9-202ENST00000398510 FGD1P98174 961 aa3.43□□□□□ -1.86
CHD9-202ENST00000398510 ATAD2BQ9ULI0 1458 aa3.43□□□□□ -1.86
CHD9-202ENST00000398510 MYOM3Q5VTT5 1437 aa3.43□□□□□ -1.86
CHD9-202ENST00000398510 MROH2BQ7Z745 1585 aa3.42□□□□□ -1.86
CHD9-202ENST00000398510 AK9Q5TCS8 1911 aa3.42□□□□□ -1.86
CHD9-202ENST00000398510 NOL10Q9BSC4 688 aaKnown RBP3.42□□□□□ -1.86
CHD9-202ENST00000398510 OS9Q13438 667 aaPredicted RBP3.42□□□□□ -1.86
CHD9-202ENST00000398510 AQRO60306 1485 aaKnown RBP eCLIP3.42□□□□□ -1.865e-7■■□□□ 14.2
CHD9-202ENST00000398510 ITSN1Q15811 1721 aa3.42□□□□□ -1.86
CHD9-202ENST00000398510 AAMPQ13685 434 aa3.42□□□□□ -1.86
CHD9-202ENST00000398510 ATP6V1DQ9Y5K8 247 aa3.42□□□□□ -1.86
CHD9-202ENST00000398510 ZNF710Q8N1W2 664 aa3.42□□□□□ -1.86
CHD9-202ENST00000398510 CGNL1Q0VF96 1302 aa3.42□□□□□ -1.86
CHD9-202ENST00000398510 CHD1O14646 1710 aa3.42□□□□□ -1.86
CHD9-202ENST00000398510 TULP1O00294 542 aaPredicted RBP3.42□□□□□ -1.86
CHD9-202ENST00000398510 WDR7Q9Y4E6 1490 aa3.41□□□□□ -1.86
CHD9-202ENST00000398510 ZC3H13Q5T200 1668 aaKnown RBP3.41□□□□□ -1.86
CHD9-202ENST00000398510 RPRD2Q5VT52 1461 aaKnown RBP3.41□□□□□ -1.86
CHD9-202ENST00000398510 KIAA1211Q6ZU35 1233 aa3.41□□□□□ -1.86
CHD9-202ENST00000398510 KDM5AP29375 1690 aaKnown RBP3.41□□□□□ -1.86
CHD9-202ENST00000398510 SETD1BQ9UPS6 1966 aaKnown RBP3.41□□□□□ -1.86
CHD9-202ENST00000398510 CEP89Q96ST8 783 aa3.41□□□□□ -1.86
CHD9-202ENST00000398510 GTF3C3Q9Y5Q9 886 aa3.41□□□□□ -1.86
CHD9-202ENST00000398510 KIF15Q9NS87 1388 aa3.41□□□□□ -1.86
CHD9-202ENST00000398510 TPM2P07951 284 aa3.41□□□□□ -1.86
CHD9-202ENST00000398510 OSCARQ8IYS5 282 aa3.41□□□□□ -1.86
CHD9-202ENST00000398510 HOOK1Q9UJC3 728 aaKnown RBP3.41□□□□□ -1.86
CHD9-202ENST00000398510 CNTLNQ9NXG0 1405 aa3.41□□□□□ -1.86
CHD9-202ENST00000398510 IL27Q8NEV9 243 aa3.41□□□□□ -1.86
CHD9-202ENST00000398510 SF3B2Q13435 895 aaKnown RBP3.41□□□□□ -1.86
CHD9-202ENST00000398510 DMRT2Q9Y5R5 561 aa3.41□□□□□ -1.86
CHD9-202ENST00000398510 FGD5Q6ZNL6 1462 aa3.41□□□□□ -1.86
CHD9-202ENST00000398510 MEX3CQ5U5Q3 659 aaKnown RBP3.41□□□□□ -1.86
CHD9-202ENST00000398510 TRIM34Q9BYJ4 488 aa3.41□□□□□ -1.86
CHD9-202ENST00000398510 DHX8Q14562 1220 aaKnown RBP3.41□□□□□ -1.86
CHD9-202ENST00000398510 CCDC70Q6NSX1 233 aa3.41□□□□□ -1.86
CHD9-202ENST00000398510 CROCC2H7BZ55 1655 aa3.41□□□□□ -1.86
CHD9-202ENST00000398510 GOLGA6L4A6NEF3 574 aa3.4□□□□□ -1.86
CHD9-202ENST00000398510 CLSTN1O94985 981 aa3.4□□□□□ -1.86
CHD9-202ENST00000398510 KCNJ4P48050 445 aa3.4□□□□□ -1.86
CHD9-202ENST00000398510 CENPJQ9HC77 1338 aaPredicted RBP3.4□□□□□ -1.86
CHD9-202ENST00000398510 GPRASP1Q5JY77 1395 aa3.4□□□□□ -1.87
CHD9-202ENST00000398510 NAP1L2Q9ULW6 460 aaPredicted RBP3.4□□□□□ -1.87
CHD9-202ENST00000398510 NKTRP30414 1462 aaKnown RBP3.4□□□□□ -1.87
CHD9-202ENST00000398510 ABCA10Q8WWZ4 1543 aa3.4□□□□□ -1.87
CHD9-202ENST00000398510 C11orf95C9JLR9 678 aaPredicted RBP3.4□□□□□ -1.87
CHD9-202ENST00000398510 LAMC1P11047 1609 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 FEZ1Q99689 392 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 TPM3P06753 285 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 WWC2Q6AWC2 1192 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 CFTRP13569 1480 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 PDIA4P13667 645 aaKnown RBP3.39□□□□□ -1.87
CHD9-202ENST00000398510 MFAP1P55081 439 aaKnown RBP3.39□□□□□ -1.87
CHD9-202ENST00000398510 NEXNQ0ZGT2 675 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 STK31Q9BXU1 1019 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 MYO6Q9UM54 1294 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 LRPPRCP42704 1394 aaKnown RBP3.39□□□□□ -1.87
CHD9-202ENST00000398510 CCDC136Q96JN2 1154 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 CARD11Q9BXL7 1154 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 NINLQ9Y2I6 1382 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 DESP17661 470 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 NOC3LQ8WTT2 800 aaKnown RBP3.39□□□□□ -1.87
CHD9-202ENST00000398510 TIAM1Q13009 1591 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 KIF16BQ96L93 1317 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 VGFO15240 615 aaPredicted RBP3.39□□□□□ -1.87
CHD9-202ENST00000398510 PODXL2Q9NZ53 605 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 LMOD2Q6P5Q4 547 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 TXLNBQ8N3L3 684 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 PTPN23Q9H3S7 1636 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 PLXNC1O60486 1568 aa3.39□□□□□ -1.87
CHD9-202ENST00000398510 CTDP1Q9Y5B0 961 aaPredicted RBP3.39□□□□□ -1.87
CHD9-202ENST00000398510 HSP90AA2PQ14568 343 aaPredicted RBP3.38□□□□□ -1.87
CHD9-202ENST00000398510 SSFA2P28290 1259 aa3.38□□□□□ -1.87
CHD9-202ENST00000398510 PPP4R2Q9NY27 417 aa3.38□□□□□ -1.87
CHD9-202ENST00000398510 FKBP8Q14318 412 aa3.38□□□□□ -1.87
CHD9-202ENST00000398510 RALBP1Q15311 655 aa3.38□□□□□ -1.87
CHD9-202ENST00000398510 MAP3K1Q13233 1512 aa3.38□□□□□ -1.87
CHD9-202ENST00000398510 EVC2Q86UK5 1308 aa3.38□□□□□ -1.87
CHD9-202ENST00000398510 HOMEZQ8IX15 550 aa3.38□□□□□ -1.87
CHD9-202ENST00000398510 TTC5Q8N0Z6 440 aa3.38□□□□□ -1.87
CHD9-202ENST00000398510 PKNOX2Q96KN3 472 aa3.38□□□□□ -1.87
CHD9-202ENST00000398510 EIF3DO15371 548 aaKnown RBP eCLIP3.38□□□□□ -1.879e-7■□□□□ 9.6
CHD9-202ENST00000398510 TSR1Q2NL82 804 aaKnown RBP3.38□□□□□ -1.87
CHD9-202ENST00000398510 ANKRD20A12PQ8NF67 263 aa3.38□□□□□ -1.87
CHD9-202ENST00000398510 RSPH6AQ9H0K4 717 aa3.38□□□□□ -1.87
CHD9-202ENST00000398510 PLB1Q6P1J6 1458 aa3.38□□□□□ -1.87
CHD9-202ENST00000398510 POLA1P09884 1462 aaPredicted RBP3.37□□□□□ -1.87
CHD9-202ENST00000398510 ADCY10Q96PN6 1610 aa3.37□□□□□ -1.87
CHD9-202ENST00000398510 PTPRGP23470 1445 aa3.37□□□□□ -1.87
CHD9-202ENST00000398510 KCNH8Q96L42 1107 aa3.37□□□□□ -1.87
CHD9-202ENST00000398510 CDC42BPAQ5VT25 1732 aa3.37□□□□□ -1.87
CHD9-202ENST00000398510 TPM1P09493 284 aa3.37□□□□□ -1.87
CHD9-202ENST00000398510 BRMS1Q9HCU9 246 aa3.37□□□□□ -1.87
CHD9-202ENST00000398510 TOPBP1Q92547 1522 aa3.37□□□□□ -1.87
CHD9-202ENST00000398510 GORABQ5T7V8 394 aa3.37□□□□□ -1.87
CHD9-202ENST00000398510 KIF7Q2M1P5 1343 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms