RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 ERBINQ96RT1 1412 aa24.01■■□□□ 1.43
MBD1-207ENST00000398488 EIF2AK4Q9P2K8 1649 aaKnown RBP24.01■■□□□ 1.43
MBD1-207ENST00000398488 RNF17Q9BXT8 1623 aaKnown RBP24■■□□□ 1.43
MBD1-207ENST00000398488 CLTCQ00610 1675 aaKnown RBP23.99■■□□□ 1.43
MBD1-207ENST00000398488 ANKRD50Q9ULJ7 1429 aa23.98■■□□□ 1.43
MBD1-207ENST00000398488 C3P01024 1663 aa23.95■■□□□ 1.42
MBD1-207ENST00000398488 ZMYM3Q14202 1370 aa23.95■■□□□ 1.42
MBD1-207ENST00000398488 ESF1Q9H501 851 aaKnown RBP23.94■■□□□ 1.42
MBD1-207ENST00000398488 CNTLNQ9NXG0 1405 aa23.94■■□□□ 1.42
MBD1-207ENST00000398488 PPP6R1Q9UPN7 881 aa23.94■■□□□ 1.42
MBD1-207ENST00000398488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.93■■□□□ 1.42
MBD1-207ENST00000398488 WASHC2CQ9Y4E1 1318 aa23.92■■□□□ 1.42
MBD1-207ENST00000398488 DEPDC5O75140 1603 aa23.92■■□□□ 1.42
MBD1-207ENST00000398488 MROH2AA6NES4 1674 aa23.91■■□□□ 1.42
MBD1-207ENST00000398488 NAIPQ13075 1403 aa23.91■■□□□ 1.42
MBD1-207ENST00000398488 ABCC3O15438 1527 aa23.91■■□□□ 1.42
MBD1-207ENST00000398488 KDM5DQ9BY66 1539 aa23.91■■□□□ 1.42
MBD1-207ENST00000398488 PRDM15P57071 1507 aaPredicted RBP23.9■■□□□ 1.42
MBD1-207ENST00000398488 CEP152O94986 1710 aa23.88■■□□□ 1.41
MBD1-207ENST00000398488 VWDEQ8N2E2 1590 aa23.86■■□□□ 1.41
MBD1-207ENST00000398488 FBXO31Q5XUX0 539 aaPredicted RBP23.85■■□□□ 1.41
MBD1-207ENST00000398488 FAM135AQ9P2D6 1515 aa23.84■■□□□ 1.41
MBD1-207ENST00000398488 HFM1A2PYH4 1435 aa23.84■■□□□ 1.41
MBD1-207ENST00000398488 GCC2Q8IWJ2 1684 aa23.83■■□□□ 1.4
MBD1-207ENST00000398488 UNC13BO14795 1591 aa23.82■■□□□ 1.4
MBD1-207ENST00000398488 ZC3H13Q5T200 1668 aaKnown RBP23.81■■□□□ 1.4
MBD1-207ENST00000398488 CAMSAP1Q5T5Y3 1602 aa23.8■■□□□ 1.4
MBD1-207ENST00000398488 PZPP20742 1482 aa23.79■■□□□ 1.4
MBD1-207ENST00000398488 KANK1Q14678 1352 aa23.79■■□□□ 1.4
MBD1-207ENST00000398488 LMTK2Q8IWU2 1503 aa23.78■■□□□ 1.4
MBD1-207ENST00000398488 LMTK3Q96Q04 1460 aa23.78■■□□□ 1.4
MBD1-207ENST00000398488 NPATQ14207 1427 aa23.77■■□□□ 1.4
MBD1-207ENST00000398488 NUP155O75694 1391 aa23.75■■□□□ 1.39
MBD1-207ENST00000398488 CFAP65Q6ZU64 1925 aaKnown RBP23.73■■□□□ 1.39
MBD1-207ENST00000398488 ARHGAP31Q2M1Z3 1444 aa23.73■■□□□ 1.39
MBD1-207ENST00000398488 HSPA2P54652 639 aa23.73■■□□□ 1.39
MBD1-207ENST00000398488 PREX1Q8TCU6 1659 aa23.73■■□□□ 1.39
MBD1-207ENST00000398488 SETD1BQ9UPS6 1966 aaKnown RBP23.72■■□□□ 1.39
MBD1-207ENST00000398488 IQGAP3Q86VI3 1631 aa23.71■■□□□ 1.39
MBD1-207ENST00000398488 EFCAB6Q5THR3 1501 aa23.71■■□□□ 1.39
MBD1-207ENST00000398488 ERVK-7P63135 1459 aa23.7■■□□□ 1.39
MBD1-207ENST00000398488 TNRQ92752 1358 aa23.7■■□□□ 1.38
MBD1-207ENST00000398488 SPATA31D1Q6ZQQ2 1576 aa23.7■■□□□ 1.38
MBD1-207ENST00000398488 UHRF1BP1Q6BDS2 1440 aa23.68■■□□□ 1.38
MBD1-207ENST00000398488 MYO3AQ8NEV4 1616 aa23.68■■□□□ 1.38
MBD1-207ENST00000398488 TET3O43151 1660 aa23.68■■□□□ 1.38
MBD1-207ENST00000398488 SETD5Q9C0A6 1442 aa23.68■■□□□ 1.38
MBD1-207ENST00000398488 TRIM52Q96A61 297 aa23.65■■□□□ 1.38
MBD1-207ENST00000398488 E9PCH4 1651 aa23.65■■□□□ 1.38
MBD1-207ENST00000398488 RAB3GAP2Q9H2M9 1393 aa23.63■■□□□ 1.37
MBD1-207ENST00000398488 NOS1P29475 1434 aa23.62■■□□□ 1.37
MBD1-207ENST00000398488 SYNMO15061 1565 aa23.61■■□□□ 1.37
MBD1-207ENST00000398488 CEP170BQ9Y4F5 1589 aaPredicted RBP23.61■■□□□ 1.37
MBD1-207ENST00000398488 ZNF142P52746 1687 aaPredicted RBP23.6■■□□□ 1.37
MBD1-207ENST00000398488 A2ML1A8K2U0 1454 aa23.59■■□□□ 1.37
MBD1-207ENST00000398488 RPRD2Q5VT52 1461 aaKnown RBP23.58■■□□□ 1.37
MBD1-207ENST00000398488 NLRP1Q9C000 1473 aa23.56■■□□□ 1.36
MBD1-207ENST00000398488 IDI1Q13907 227 aa23.55■■□□□ 1.36
MBD1-207ENST00000398488 UGGT1Q9NYU2 1555 aa23.55■■□□□ 1.36
MBD1-207ENST00000398488 PKD2Q13563 968 aa23.54■■□□□ 1.36
MBD1-207ENST00000398488 SLC4A1APQ9BWU0 796 aaKnown RBP23.54■■□□□ 1.36
MBD1-207ENST00000398488 FOXD1Q16676 465 aa23.54■■□□□ 1.36
MBD1-207ENST00000398488 TRIM26Q12899 539 aaPredicted RBP23.53■■□□□ 1.36
MBD1-207ENST00000398488 MPHOSPH9Q99550 1183 aa23.52■■□□□ 1.36
MBD1-207ENST00000398488 STRCQ7RTU9 1775 aa23.52■■□□□ 1.36
MBD1-207ENST00000398488 PIK3C2BO00750 1634 aa23.52■■□□□ 1.36
MBD1-207ENST00000398488 PLA2R1Q13018 1463 aa23.5■■□□□ 1.35
MBD1-207ENST00000398488 PTPRTO14522 1441 aa23.5■■□□□ 1.35
MBD1-207ENST00000398488 UBR1Q8IWV7 1749 aa23.49■■□□□ 1.35
MBD1-207ENST00000398488 NCKAP5LQ9HCH0 1330 aa23.48■■□□□ 1.35
MBD1-207ENST00000398488 HRCP23327 699 aa23.46■■□□□ 1.35
MBD1-207ENST00000398488 SLC52A1Q9NWF4 448 aa23.46■■□□□ 1.35
MBD1-207ENST00000398488 SPHKAPQ2M3C7 1700 aa23.46■■□□□ 1.35
MBD1-207ENST00000398488 THEMISQ8N1K5 641 aaPredicted RBP23.44■■□□□ 1.34
MBD1-207ENST00000398488 ADGRB3O60242 1522 aa23.41■■□□□ 1.34
MBD1-207ENST00000398488 CLTCL1P53675 1640 aa23.41■■□□□ 1.34
MBD1-207ENST00000398488 TRPM2O94759 1503 aa23.4■■□□□ 1.34
MBD1-207ENST00000398488 TMEM131LA2VDJ0 1609 aa23.4■■□□□ 1.34
MBD1-207ENST00000398488 MYO5BQ9ULV0 1848 aa23.4■■□□□ 1.34
MBD1-207ENST00000398488 LTKP29376 864 aa23.38■■□□□ 1.33
MBD1-207ENST00000398488 STAG3Q9UJ98 1225 aa23.38■■□□□ 1.33
MBD1-207ENST00000398488 ARHGAP23Q9P227 1491 aa23.38■■□□□ 1.33
MBD1-207ENST00000398488 NEURL4Q96JN8 1562 aa23.38■■□□□ 1.33
MBD1-207ENST00000398488 CHGAP10645 457 aaKnown RBP23.38■■□□□ 1.33
MBD1-207ENST00000398488 ACIN1Q9UKV3 1341 aaKnown RBP23.37■■□□□ 1.33
MBD1-207ENST00000398488 KDM5AP29375 1690 aaKnown RBP23.37■■□□□ 1.33
MBD1-207ENST00000398488 TMEM2Q9UHN6 1383 aa23.37■■□□□ 1.33
MBD1-207ENST00000398488 SLIT1O75093 1534 aa23.36■■□□□ 1.33
MBD1-207ENST00000398488 ANKLE2Q86XL3 938 aa23.34■■□□□ 1.33
MBD1-207ENST00000398488 POLR1AO95602 1720 aaPredicted RBP23.33■■□□□ 1.32
MBD1-207ENST00000398488 TXNDC2Q86VQ3 553 aa23.32■■□□□ 1.32
MBD1-207ENST00000398488 ZFYVE9O95405 1425 aa23.3■■□□□ 1.32
MBD1-207ENST00000398488 NUTM2DQ5VT03 806 aaPredicted RBP23.29■■□□□ 1.32
MBD1-207ENST00000398488 SCAF11Q99590 1463 aaKnown RBP23.29■■□□□ 1.32
MBD1-207ENST00000398488 MED14O60244 1454 aa23.29■■□□□ 1.32
MBD1-207ENST00000398488 ANKRD30BQ9BXX2 1392 aa23.28■■□□□ 1.32
MBD1-207ENST00000398488 NPHP4O75161 1426 aaPredicted RBP23.28■■□□□ 1.32
MBD1-207ENST00000398488 RIMS2Q9UQ26 1411 aa23.28■■□□□ 1.32
MBD1-207ENST00000398488 PCGF6Q9BYE7 350 aa23.28■■□□□ 1.32
MBD1-207ENST00000398488 SENP3Q9H4L4 574 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms