RNA–Protein interactions for RNA: ENST00000398236.7

PDE9A-213, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-213ENST00000398236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.37■■■□□ 2.13
PDE9A-213ENST00000398236 CNTLNQ9NXG0 1405 aa28.37■■■□□ 2.13
PDE9A-213ENST00000398236 WASHC2CQ9Y4E1 1318 aa28.37■■■□□ 2.13
PDE9A-213ENST00000398236 ADGRL2O95490 1459 aa28.36■■■□□ 2.13
PDE9A-213ENST00000398236 EIF2AK4Q9P2K8 1649 aaKnown RBP28.36■■■□□ 2.13
PDE9A-213ENST00000398236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.35■■■□□ 2.13
PDE9A-213ENST00000398236 MROH2AA6NES4 1674 aa28.33■■■□□ 2.13
PDE9A-213ENST00000398236 ERBINQ96RT1 1412 aa28.33■■■□□ 2.13
PDE9A-213ENST00000398236 RNF17Q9BXT8 1623 aaKnown RBP28.33■■■□□ 2.13
PDE9A-213ENST00000398236 PPP6R1Q9UPN7 881 aa28.32■■■□□ 2.12
PDE9A-213ENST00000398236 MROH1Q8NDA8 1641 aa28.3■■■□□ 2.12
PDE9A-213ENST00000398236 KDM5DQ9BY66 1539 aa28.29■■■□□ 2.12
PDE9A-213ENST00000398236 CEP152O94986 1710 aa28.29■■■□□ 2.12
PDE9A-213ENST00000398236 CFAP65Q6ZU64 1925 aaKnown RBP28.28■■■□□ 2.12
PDE9A-213ENST00000398236 HSPA2P54652 639 aa28.27■■■□□ 2.12
PDE9A-213ENST00000398236 SETD1BQ9UPS6 1966 aaKnown RBP28.27■■■□□ 2.12
PDE9A-213ENST00000398236 ANKRD50Q9ULJ7 1429 aa28.27■■■□□ 2.12
PDE9A-213ENST00000398236 FBXO31Q5XUX0 539 aaPredicted RBP28.26■■■□□ 2.11
PDE9A-213ENST00000398236 LMTK3Q96Q04 1460 aa28.25■■■□□ 2.11
PDE9A-213ENST00000398236 ROCK1Q13464 1354 aa28.24■■■□□ 2.11
PDE9A-213ENST00000398236 ABCC3O15438 1527 aa28.23■■■□□ 2.11
PDE9A-213ENST00000398236 PREX1Q8TCU6 1659 aa28.23■■■□□ 2.11
PDE9A-213ENST00000398236 DEPDC5O75140 1603 aa28.21■■■□□ 2.11
PDE9A-213ENST00000398236 PRDM15P57071 1507 aaPredicted RBP28.19■■■□□ 2.1
PDE9A-213ENST00000398236 ZC3H13Q5T200 1668 aaKnown RBP28.18■■■□□ 2.1
PDE9A-213ENST00000398236 UHRF1BP1Q6BDS2 1440 aa28.17■■■□□ 2.1
PDE9A-213ENST00000398236 KANK1Q14678 1352 aa28.17■■■□□ 2.1
PDE9A-213ENST00000398236 CAMSAP1Q5T5Y3 1602 aa28.16■■■□□ 2.1
PDE9A-213ENST00000398236 FAM135AQ9P2D6 1515 aa28.15■■■□□ 2.1
PDE9A-213ENST00000398236 NPATQ14207 1427 aa28.15■■■□□ 2.1
PDE9A-213ENST00000398236 PZPP20742 1482 aa28.14■■■□□ 2.1
PDE9A-213ENST00000398236 MYO3AQ8NEV4 1616 aa28.09■■■□□ 2.09
PDE9A-213ENST00000398236 NAIPQ13075 1403 aa28.09■■■□□ 2.09
PDE9A-213ENST00000398236 TNRQ92752 1358 aa28.08■■■□□ 2.09
PDE9A-213ENST00000398236 VWDEQ8N2E2 1590 aa28.08■■■□□ 2.09
PDE9A-213ENST00000398236 UNC13BO14795 1591 aa28.06■■■□□ 2.08
PDE9A-213ENST00000398236 GCC2Q8IWJ2 1684 aa28.05■■■□□ 2.08
PDE9A-213ENST00000398236 NUP155O75694 1391 aa28.03■■■□□ 2.08
PDE9A-213ENST00000398236 ERVK-7P63135 1459 aa28.02■■■□□ 2.08
PDE9A-213ENST00000398236 CEP170BQ9Y4F5 1589 aaPredicted RBP28.01■■■□□ 2.07
PDE9A-213ENST00000398236 LMTK2Q8IWU2 1503 aa28.01■■■□□ 2.07
PDE9A-213ENST00000398236 HFM1A2PYH4 1435 aa28■■■□□ 2.07
PDE9A-213ENST00000398236 SPATA31D1Q6ZQQ2 1576 aa27.99■■■□□ 2.07
PDE9A-213ENST00000398236 ARHGAP31Q2M1Z3 1444 aa27.99■■■□□ 2.07
PDE9A-213ENST00000398236 EFCAB6Q5THR3 1501 aa27.98■■■□□ 2.07
PDE9A-213ENST00000398236 ZNF142P52746 1687 aaPredicted RBP27.98■■■□□ 2.07
PDE9A-213ENST00000398236 TRIM52Q96A61 297 aa27.97■■■□□ 2.07
PDE9A-213ENST00000398236 TET3O43151 1660 aa27.96■■■□□ 2.07
PDE9A-213ENST00000398236 STRCQ7RTU9 1775 aa27.96■■■□□ 2.07
PDE9A-213ENST00000398236 IQGAP3Q86VI3 1631 aa27.95■■■□□ 2.07
PDE9A-213ENST00000398236 A2ML1A8K2U0 1454 aa27.95■■■□□ 2.07
PDE9A-213ENST00000398236 E9PCH4 1651 aa27.92■■■□□ 2.06
PDE9A-213ENST00000398236 NCKAP5LQ9HCH0 1330 aa27.91■■■□□ 2.06
PDE9A-213ENST00000398236 NLRP1Q9C000 1473 aa27.9■■■□□ 2.06
PDE9A-213ENST00000398236 UGGT1Q9NYU2 1555 aa27.89■■■□□ 2.05
PDE9A-213ENST00000398236 SYNMO15061 1565 aa27.88■■■□□ 2.05
PDE9A-213ENST00000398236 IDI1Q13907 227 aa27.86■■■□□ 2.05
PDE9A-213ENST00000398236 NOS1P29475 1434 aa27.85■■■□□ 2.05
PDE9A-213ENST00000398236 PIK3C2BO00750 1634 aa27.84■■■□□ 2.05
PDE9A-213ENST00000398236 THEMISQ8N1K5 641 aaPredicted RBP27.84■■■□□ 2.05
PDE9A-213ENST00000398236 STAG3Q9UJ98 1225 aa27.83■■■□□ 2.05
PDE9A-213ENST00000398236 RPRD2Q5VT52 1461 aaKnown RBP27.83■■■□□ 2.05
PDE9A-213ENST00000398236 UBR1Q8IWV7 1749 aa27.83■■■□□ 2.04
PDE9A-213ENST00000398236 SETD5Q9C0A6 1442 aa27.82■■■□□ 2.04
PDE9A-213ENST00000398236 SLC4A1APQ9BWU0 796 aaKnown RBP27.8■■■□□ 2.04
PDE9A-213ENST00000398236 PKD2Q13563 968 aa27.78■■■□□ 2.04
PDE9A-213ENST00000398236 CHGAP10645 457 aaKnown RBP27.77■■■□□ 2.04
PDE9A-213ENST00000398236 PLA2R1Q13018 1463 aa27.77■■■□□ 2.04
PDE9A-213ENST00000398236 FOXD1Q16676 465 aa27.76■■■□□ 2.03
PDE9A-213ENST00000398236 DMRT2Q9Y5R5 561 aa27.76■■■□□ 2.03
PDE9A-213ENST00000398236 RAB3GAP2Q9H2M9 1393 aa27.76■■■□□ 2.03
PDE9A-213ENST00000398236 MYO5BQ9ULV0 1848 aa27.75■■■□□ 2.03
PDE9A-213ENST00000398236 ANKLE2Q86XL3 938 aa27.75■■■□□ 2.03
PDE9A-213ENST00000398236 SLC52A1Q9NWF4 448 aa27.75■■■□□ 2.03
PDE9A-213ENST00000398236 POLR1AO95602 1720 aaPredicted RBP27.74■■■□□ 2.03
PDE9A-213ENST00000398236 SPHKAPQ2M3C7 1700 aa27.73■■■□□ 2.03
PDE9A-213ENST00000398236 SENP3Q9H4L4 574 aaPredicted RBP27.71■■■□□ 2.03
PDE9A-213ENST00000398236 MPHOSPH9Q99550 1183 aa27.7■■■□□ 2.02
PDE9A-213ENST00000398236 PTPRTO14522 1441 aa27.69■■■□□ 2.02
PDE9A-213ENST00000398236 NEURL4Q96JN8 1562 aa27.68■■■□□ 2.02
PDE9A-213ENST00000398236 LTKP29376 864 aa27.68■■■□□ 2.02
PDE9A-213ENST00000398236 TXNDC2Q86VQ3 553 aa27.68■■■□□ 2.02
PDE9A-213ENST00000398236 ADGRB3O60242 1522 aa27.67■■■□□ 2.02
PDE9A-213ENST00000398236 TMEM2Q9UHN6 1383 aa27.64■■■□□ 2.02
PDE9A-213ENST00000398236 TMEM131LA2VDJ0 1609 aa27.64■■■□□ 2.02
PDE9A-213ENST00000398236 NUTM2DQ5VT03 806 aaPredicted RBP27.63■■■□□ 2.01
PDE9A-213ENST00000398236 KDM5AP29375 1690 aaKnown RBP27.63■■■□□ 2.01
PDE9A-213ENST00000398236 EID1Q9Y6B2 187 aa27.63■■■□□ 2.01
PDE9A-213ENST00000398236 SLIT1O75093 1534 aa27.62■■■□□ 2.01
PDE9A-213ENST00000398236 ARHGAP23Q9P227 1491 aa27.62■■■□□ 2.01
PDE9A-213ENST00000398236 CLTCL1P53675 1640 aa27.61■■■□□ 2.01
PDE9A-213ENST00000398236 NPHP4O75161 1426 aaPredicted RBP27.61■■■□□ 2.01
PDE9A-213ENST00000398236 SCAF11Q99590 1463 aaKnown RBP27.61■■■□□ 2.01
PDE9A-213ENST00000398236 ZNF335Q9H4Z2 1342 aaPredicted RBP27.59■■■□□ 2.01
PDE9A-213ENST00000398236 IQGAP1P46940 1657 aa27.58■■■□□ 2.01
PDE9A-213ENST00000398236 TRPM2O94759 1503 aa27.58■■■□□ 2.01
PDE9A-213ENST00000398236 MED14O60244 1454 aa27.56■■■□□ 2
PDE9A-213ENST00000398236 ZNF326Q5BKZ1 582 aaKnown RBP27.55■■■□□ 2
PDE9A-213ENST00000398236 BCANQ96GW7 911 aa27.55■■■□□ 2
PDE9A-213ENST00000398236 RIMS2Q9UQ26 1411 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms