RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 MROH1Q8NDA8 1641 aa29.08■■■□□ 2.25
MAP1LC3A-203ENST00000397709 HRCP23327 699 aa29.07■■■□□ 2.24
MAP1LC3A-203ENST00000397709 PRDM15P57071 1507 aaPredicted RBP29.05■■■□□ 2.24
MAP1LC3A-203ENST00000397709 ARID4BQ4LE39 1312 aaPredicted RBP29.02■■■□□ 2.24
MAP1LC3A-203ENST00000397709 KDM5DQ9BY66 1539 aa29■■■□□ 2.23
MAP1LC3A-203ENST00000397709 ACIN1Q9UKV3 1341 aaKnown RBP29■■■□□ 2.23
MAP1LC3A-203ENST00000397709 VWDEQ8N2E2 1590 aa29■■■□□ 2.23
MAP1LC3A-203ENST00000397709 GGT6Q6P531 493 aa28.98■■■□□ 2.23
MAP1LC3A-203ENST00000397709 IQGAP3Q86VI3 1631 aa28.97■■■□□ 2.23
MAP1LC3A-203ENST00000397709 FAM135AQ9P2D6 1515 aa28.95■■■□□ 2.23
MAP1LC3A-203ENST00000397709 NUP155O75694 1391 aa28.95■■■□□ 2.22
MAP1LC3A-203ENST00000397709 MLECQ14165 292 aa28.94■■■□□ 2.22
MAP1LC3A-203ENST00000397709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.94■■■□□ 2.22
MAP1LC3A-203ENST00000397709 KANK1Q14678 1352 aa28.93■■■□□ 2.22
MAP1LC3A-203ENST00000397709 PPP6R1Q9UPN7 881 aa28.93■■■□□ 2.22
MAP1LC3A-203ENST00000397709 ZC3H13Q5T200 1668 aaKnown RBP28.93■■■□□ 2.22
MAP1LC3A-203ENST00000397709 TRIM52Q96A61 297 aa28.92■■■□□ 2.22
MAP1LC3A-203ENST00000397709 ABCC3O15438 1527 aa28.92■■■□□ 2.22
MAP1LC3A-203ENST00000397709 PZPP20742 1482 aa28.91■■■□□ 2.22
MAP1LC3A-203ENST00000397709 LMTK2Q8IWU2 1503 aa28.91■■■□□ 2.22
MAP1LC3A-203ENST00000397709 CEP152O94986 1710 aa28.9■■■□□ 2.22
MAP1LC3A-203ENST00000397709 ADAMTSL3P82987 1691 aa28.89■■■□□ 2.21
MAP1LC3A-203ENST00000397709 TET3O43151 1660 aa28.86■■■□□ 2.21
MAP1LC3A-203ENST00000397709 CLTCQ00610 1675 aaKnown RBP28.86■■■□□ 2.21
MAP1LC3A-203ENST00000397709 FER1L4A9Z1Z3 1794 aa28.85■■■□□ 2.21
MAP1LC3A-203ENST00000397709 WASHC2CQ9Y4E1 1318 aa28.85■■■□□ 2.21
MAP1LC3A-203ENST00000397709 CNTLNQ9NXG0 1405 aa28.83■■■□□ 2.21
MAP1LC3A-203ENST00000397709 CAMSAP1Q5T5Y3 1602 aa28.83■■■□□ 2.21
MAP1LC3A-203ENST00000397709 MADDQ8WXG6 1647 aa28.83■■■□□ 2.21
MAP1LC3A-203ENST00000397709 EFCAB6Q5THR3 1501 aa28.82■■■□□ 2.2
MAP1LC3A-203ENST00000397709 MROH2AA6NES4 1674 aa28.8■■■□□ 2.2
MAP1LC3A-203ENST00000397709 MPHOSPH9Q99550 1183 aa28.8■■■□□ 2.2
MAP1LC3A-203ENST00000397709 SLC4A1APQ9BWU0 796 aaKnown RBP28.79■■■□□ 2.2
MAP1LC3A-203ENST00000397709 ESF1Q9H501 851 aaKnown RBP28.77■■■□□ 2.2
MAP1LC3A-203ENST00000397709 ARHGAP31Q2M1Z3 1444 aa28.77■■■□□ 2.2
MAP1LC3A-203ENST00000397709 E9PCH4 1651 aa28.77■■■□□ 2.2
MAP1LC3A-203ENST00000397709 DHX57Q6P158 1386 aaKnown RBP28.76■■■□□ 2.2
MAP1LC3A-203ENST00000397709 RIMS1Q86UR5 1692 aaKnown RBP28.75■■■□□ 2.19
MAP1LC3A-203ENST00000397709 NPATQ14207 1427 aa28.73■■■□□ 2.19
MAP1LC3A-203ENST00000397709 RPRD2Q5VT52 1461 aaKnown RBP28.72■■■□□ 2.19
MAP1LC3A-203ENST00000397709 PKD2Q13563 968 aa28.72■■■□□ 2.19
MAP1LC3A-203ENST00000397709 ZMYM3Q14202 1370 aa28.72■■■□□ 2.19
MAP1LC3A-203ENST00000397709 C3P01024 1663 aa28.69■■■□□ 2.18
MAP1LC3A-203ENST00000397709 KDM4FA0A1W2PPD8 638 aa28.65■■■□□ 2.18
MAP1LC3A-203ENST00000397709 PREX1Q8TCU6 1659 aa28.64■■■□□ 2.18
MAP1LC3A-203ENST00000397709 FOXD1Q16676 465 aa28.64■■■□□ 2.18
MAP1LC3A-203ENST00000397709 SPHKAPQ2M3C7 1700 aa28.63■■■□□ 2.17
MAP1LC3A-203ENST00000397709 PTPRTO14522 1441 aa28.62■■■□□ 2.17
MAP1LC3A-203ENST00000397709 PTPRMP28827 1452 aa28.62■■■□□ 2.17
MAP1LC3A-203ENST00000397709 ERVK-7P63135 1459 aa28.62■■■□□ 2.17
MAP1LC3A-203ENST00000397709 SPATA31D1Q6ZQQ2 1576 aa28.62■■■□□ 2.17
MAP1LC3A-203ENST00000397709 NOS1P29475 1434 aa28.61■■■□□ 2.17
MAP1LC3A-203ENST00000397709 CFAP65Q6ZU64 1925 aaKnown RBP28.6■■■□□ 2.17
MAP1LC3A-203ENST00000397709 PLA2R1Q13018 1463 aa28.59■■■□□ 2.17
MAP1LC3A-203ENST00000397709 TRPM2O94759 1503 aa28.59■■■□□ 2.17
MAP1LC3A-203ENST00000397709 CEBPAP49715 358 aaPredicted RBP28.58■■■□□ 2.17
MAP1LC3A-203ENST00000397709 ANKRD30BQ9BXX2 1392 aa28.58■■■□□ 2.17
MAP1LC3A-203ENST00000397709 FBXO31Q5XUX0 539 aaPredicted RBP28.57■■■□□ 2.16
MAP1LC3A-203ENST00000397709 SYNMO15061 1565 aa28.57■■■□□ 2.16
MAP1LC3A-203ENST00000397709 CCER1Q8TC90 406 aaPredicted RBP28.51■■■□□ 2.15
MAP1LC3A-203ENST00000397709 PIK3C2BO00750 1634 aa28.51■■■□□ 2.15
MAP1LC3A-203ENST00000397709 TNRQ92752 1358 aa28.5■■■□□ 2.15
MAP1LC3A-203ENST00000397709 CLSPNQ9HAW4 1339 aa28.49■■■□□ 2.15
MAP1LC3A-203ENST00000397709 PLPPR3Q6T4P5 718 aa28.49■■■□□ 2.15
MAP1LC3A-203ENST00000397709 CLTCL1P53675 1640 aa28.49■■■□□ 2.15
MAP1LC3A-203ENST00000397709 UGGT1Q9NYU2 1555 aa28.48■■■□□ 2.15
MAP1LC3A-203ENST00000397709 CCDC144AA2RUR9 1427 aa28.46■■■□□ 2.15
MAP1LC3A-203ENST00000397709 SLC52A1Q9NWF4 448 aa28.43■■■□□ 2.14
MAP1LC3A-203ENST00000397709 MYO3AQ8NEV4 1616 aa28.42■■■□□ 2.14
MAP1LC3A-203ENST00000397709 NLRP1Q9C000 1473 aa28.41■■■□□ 2.14
MAP1LC3A-203ENST00000397709 SETD1BQ9UPS6 1966 aaKnown RBP28.41■■■□□ 2.14
MAP1LC3A-203ENST00000397709 IDI1Q13907 227 aa28.39■■■□□ 2.14
MAP1LC3A-203ENST00000397709 SIN3AQ96ST3 1273 aa28.38■■■□□ 2.13
MAP1LC3A-203ENST00000397709 KIF1BO60333 1816 aa28.36■■■□□ 2.13
MAP1LC3A-203ENST00000397709 ADGRB3O60242 1522 aa28.35■■■□□ 2.13
MAP1LC3A-203ENST00000397709 ZNF142P52746 1687 aaPredicted RBP28.35■■■□□ 2.13
MAP1LC3A-203ENST00000397709 NEURL4Q96JN8 1562 aa28.34■■■□□ 2.13
MAP1LC3A-203ENST00000397709 KDM5AP29375 1690 aaKnown RBP28.34■■■□□ 2.13
MAP1LC3A-203ENST00000397709 A2ML1A8K2U0 1454 aa28.34■■■□□ 2.13
MAP1LC3A-203ENST00000397709 TMEM131LA2VDJ0 1609 aa28.33■■■□□ 2.13
MAP1LC3A-203ENST00000397709 SPATA31E1Q6ZUB1 1445 aa28.33■■■□□ 2.13
MAP1LC3A-203ENST00000397709 CEP170BQ9Y4F5 1589 aaPredicted RBP28.33■■■□□ 2.12
MAP1LC3A-203ENST00000397709 UBR1Q8IWV7 1749 aa28.31■■■□□ 2.12
MAP1LC3A-203ENST00000397709 UHRF1BP1Q6BDS2 1440 aa28.3■■■□□ 2.12
MAP1LC3A-203ENST00000397709 NEUROD1Q13562 356 aa28.29■■■□□ 2.12
MAP1LC3A-203ENST00000397709 MYO5BQ9ULV0 1848 aa28.29■■■□□ 2.12
MAP1LC3A-203ENST00000397709 CHGAP10645 457 aaKnown RBP28.24■■■□□ 2.11
MAP1LC3A-203ENST00000397709 STAG3Q9UJ98 1225 aa28.22■■■□□ 2.11
MAP1LC3A-203ENST00000397709 RGL3Q3MIN7 710 aa28.18■■■□□ 2.1
MAP1LC3A-203ENST00000397709 LMTK3Q96Q04 1460 aa28.18■■■□□ 2.1
MAP1LC3A-203ENST00000397709 IFT172Q9UG01 1749 aa28.18■■■□□ 2.1
MAP1LC3A-203ENST00000397709 TONSLQ96HA7 1378 aa28.17■■■□□ 2.1
MAP1LC3A-203ENST00000397709 NEXMIFQ5QGS0 1516 aa28.17■■■□□ 2.1
MAP1LC3A-203ENST00000397709 ARHGAP23Q9P227 1491 aa28.16■■■□□ 2.1
MAP1LC3A-203ENST00000397709 ZNF326Q5BKZ1 582 aaKnown RBP28.16■■■□□ 2.1
MAP1LC3A-203ENST00000397709 THEMISQ8N1K5 641 aaPredicted RBP28.16■■■□□ 2.1
MAP1LC3A-203ENST00000397709 SLIT1O75093 1534 aa28.16■■■□□ 2.1
MAP1LC3A-203ENST00000397709 PPLO60437 1756 aa28.16■■■□□ 2.1
MAP1LC3A-203ENST00000397709 RPGRIP1LQ68CZ1 1315 aa28.16■■■□□ 2.1
MAP1LC3A-203ENST00000397709 TMEM2Q9UHN6 1383 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms