RNA–Protein interactions for RNA: ENST00000396974.2

C2orf88-202, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-202ENST00000396974 PLXNC1O60486 1568 aa11.73□□□□□ -0.53
C2orf88-202ENST00000396974 TROQ12816 1431 aaPredicted RBP11.73□□□□□ -0.53
C2orf88-202ENST00000396974 CDC42BPAQ5VT25 1732 aa11.73□□□□□ -0.53
C2orf88-202ENST00000396974 SPINK5Q9NQ38 1064 aaPredicted RBP11.72□□□□□ -0.53
C2orf88-202ENST00000396974 DSG3P32926 999 aa11.7□□□□□ -0.54
C2orf88-202ENST00000396974 ATP1B4Q9UN42 357 aaPredicted RBP11.7□□□□□ -0.54
C2orf88-202ENST00000396974 LRRC7Q96NW7 1537 aa11.7□□□□□ -0.54
C2orf88-202ENST00000396974 XIRP1Q702N8 1843 aaKnown RBP11.7□□□□□ -0.54
C2orf88-202ENST00000396974 RNF17Q9BXT8 1623 aaKnown RBP11.69□□□□□ -0.54
C2orf88-202ENST00000396974 POTEHQ6S545 545 aa11.69□□□□□ -0.54
C2orf88-202ENST00000396974 INO80Q9ULG1 1556 aaPredicted RBP11.67□□□□□ -0.54
C2orf88-202ENST00000396974 CDK11AQ9UQ88 783 aaPredicted RBP11.67□□□□□ -0.54
C2orf88-202ENST00000396974 IQGAP1P46940 1657 aa11.67□□□□□ -0.54
C2orf88-202ENST00000396974 DEPDC5O75140 1603 aa11.67□□□□□ -0.54
C2orf88-202ENST00000396974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.67□□□□□ -0.54
C2orf88-202ENST00000396974 ATP7AQ04656 1500 aa11.66□□□□□ -0.54
C2orf88-202ENST00000396974 MED14O60244 1454 aa11.66□□□□□ -0.54
C2orf88-202ENST00000396974 FBXO31Q5XUX0 539 aaPredicted RBP11.66□□□□□ -0.54
C2orf88-202ENST00000396974 GGT6Q6P531 493 aa11.66□□□□□ -0.54
C2orf88-202ENST00000396974 SYCP2Q9BX26 1530 aa11.65□□□□□ -0.54
C2orf88-202ENST00000396974 A2MP01023 1474 aa11.65□□□□□ -0.54
C2orf88-202ENST00000396974 CLIP1P30622 1438 aa11.65□□□□□ -0.54
C2orf88-202ENST00000396974 SYNMO15061 1565 aa11.64□□□□□ -0.55
C2orf88-202ENST00000396974 NPHP4O75161 1426 aaPredicted RBP11.64□□□□□ -0.55
C2orf88-202ENST00000396974 SPAG9O60271 1321 aaKnown RBP11.63□□□□□ -0.55
C2orf88-202ENST00000396974 FMN1Q68DA7 1419 aa11.63□□□□□ -0.55
C2orf88-202ENST00000396974 ARHGAP35Q9NRY4 1499 aa11.63□□□□□ -0.55
C2orf88-202ENST00000396974 ZC3H13Q5T200 1668 aaKnown RBP11.62□□□□□ -0.55
C2orf88-202ENST00000396974 HNRNPMP52272 730 aaKnown RBP eCLIP11.62□□□□□ -0.55
C2orf88-202ENST00000396974 ANKLE2Q86XL3 938 aa11.62□□□□□ -0.55
C2orf88-202ENST00000396974 ADGBQ8N7X0 1667 aa11.62□□□□□ -0.55
C2orf88-202ENST00000396974 TNRQ92752 1358 aa11.61□□□□□ -0.55
C2orf88-202ENST00000396974 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.55
C2orf88-202ENST00000396974 UGGT1Q9NYU2 1555 aa11.59□□□□□ -0.55
C2orf88-202ENST00000396974 ZNF777Q9ULD5 760 aaPredicted RBP11.59□□□□□ -0.55
C2orf88-202ENST00000396974 PZPP20742 1482 aa11.58□□□□□ -0.56
C2orf88-202ENST00000396974 GPATCH8Q9UKJ3 1502 aaKnown RBP11.57□□□□□ -0.56
C2orf88-202ENST00000396974 ROBO1Q9Y6N7 1651 aa11.57□□□□□ -0.56
C2orf88-202ENST00000396974 THEMISQ8N1K5 641 aaPredicted RBP11.57□□□□□ -0.56
C2orf88-202ENST00000396974 FAM135BQ49AJ0 1406 aa11.56□□□□□ -0.56
C2orf88-202ENST00000396974 MIA2Q96PC5 1412 aa11.55□□□□□ -0.56
C2orf88-202ENST00000396974 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
C2orf88-202ENST00000396974 NLRP1Q9C000 1473 aa11.55□□□□□ -0.56
C2orf88-202ENST00000396974 FAM135AQ9P2D6 1515 aa11.55□□□□□ -0.56
C2orf88-202ENST00000396974 EP400Q96L91 3159 aa11.53□□□□□ -0.56
C2orf88-202ENST00000396974 EEA1Q15075 1411 aa11.53□□□□□ -0.56
C2orf88-202ENST00000396974 KDM5DQ9BY66 1539 aa11.53□□□□□ -0.56
C2orf88-202ENST00000396974 CFAP65Q6ZU64 1925 aaKnown RBP11.52□□□□□ -0.56
C2orf88-202ENST00000396974 UBR1Q8IWV7 1749 aa11.52□□□□□ -0.57
C2orf88-202ENST00000396974 PHLPP1O60346 1717 aa11.5□□□□□ -0.57
C2orf88-202ENST00000396974 EHMT2Q96KQ7 1210 aa11.5□□□□□ -0.57
C2orf88-202ENST00000396974 DHX29Q7Z478 1369 aaKnown RBP11.5□□□□□ -0.57
C2orf88-202ENST00000396974 CCDC18Q5T9S5 1454 aa11.5□□□□□ -0.57
C2orf88-202ENST00000396974 ZNF644Q9H582 1327 aaPredicted RBP11.49□□□□□ -0.57
C2orf88-202ENST00000396974 CASKIN1Q8WXD9 1431 aa11.49□□□□□ -0.57
C2orf88-202ENST00000396974 PLEKHH2Q8IVE3 1493 aa11.49□□□□□ -0.57
C2orf88-202ENST00000396974 MBD5Q9P267 1494 aa11.49□□□□□ -0.57
C2orf88-202ENST00000396974 LRP6O75581 1613 aa11.49□□□□□ -0.57
C2orf88-202ENST00000396974 KIF3BO15066 747 aa11.48□□□□□ -0.57
C2orf88-202ENST00000396974 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
C2orf88-202ENST00000396974 WASHC2CQ9Y4E1 1318 aa11.48□□□□□ -0.57
C2orf88-202ENST00000396974 MAP3K1Q13233 1512 aa11.48□□□□□ -0.57
C2orf88-202ENST00000396974 SCAF11Q99590 1463 aaKnown RBP11.47□□□□□ -0.57
C2orf88-202ENST00000396974 SLC4A2P04920 1241 aa11.47□□□□□ -0.57
C2orf88-202ENST00000396974 LTKP29376 864 aa11.47□□□□□ -0.57
C2orf88-202ENST00000396974 CFDP1Q9UEE9 299 aaPredicted RBP11.47□□□□□ -0.57
C2orf88-202ENST00000396974 NCOA2Q15596 1464 aa11.46□□□□□ -0.57
C2orf88-202ENST00000396974 RBM33Q96EV2 1170 aaKnown RBP11.46□□□□□ -0.57
C2orf88-202ENST00000396974 RTEL1-TNFRSF6BF6WH68 1400 aa11.45□□□□□ -0.58
C2orf88-202ENST00000396974 TMEM94Q12767 1356 aa11.45□□□□□ -0.58
C2orf88-202ENST00000396974 ABCB7O75027 752 aa11.45□□□□□ -0.58
C2orf88-202ENST00000396974 UBTFP17480 764 aaKnown RBP11.45□□□□□ -0.58
C2orf88-202ENST00000396974 KCNA4P22459 653 aa11.45□□□□□ -0.58
C2orf88-202ENST00000396974 APLP2Q06481 763 aa11.45□□□□□ -0.58
C2orf88-202ENST00000396974 COL16A1Q07092 1604 aaPredicted RBP11.45□□□□□ -0.58
C2orf88-202ENST00000396974 ARHGAP23Q9P227 1491 aa11.44□□□□□ -0.58
C2orf88-202ENST00000396974 SLIT1O75093 1534 aa11.44□□□□□ -0.58
C2orf88-202ENST00000396974 JCADQ9P266 1359 aa11.43□□□□□ -0.58
C2orf88-202ENST00000396974 ZNF219Q9P2Y4 722 aaPredicted RBP11.43□□□□□ -0.58
C2orf88-202ENST00000396974 ERVK-7P63135 1459 aa11.43□□□□□ -0.58
C2orf88-202ENST00000396974 CCNB3Q8WWL7 1395 aa11.41□□□□□ -0.58
C2orf88-202ENST00000396974 ABCC3O15438 1527 aa11.41□□□□□ -0.58
C2orf88-202ENST00000396974 TXNDC2Q86VQ3 553 aa11.41□□□□□ -0.58
C2orf88-202ENST00000396974 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
C2orf88-202ENST00000396974 CEP152O94986 1710 aa11.4□□□□□ -0.58
C2orf88-202ENST00000396974 LRRC9Q6ZRR7 1453 aa11.39□□□□□ -0.59
C2orf88-202ENST00000396974 FYCO1Q9BQS8 1478 aa11.39□□□□□ -0.59
C2orf88-202ENST00000396974 ZNF772Q68DY9 489 aaPredicted RBP11.39□□□□□ -0.59
C2orf88-202ENST00000396974 MROH1Q8NDA8 1641 aa11.38□□□□□ -0.59
C2orf88-202ENST00000396974 CDK12Q9NYV4 1490 aaPredicted RBP11.38□□□□□ -0.59
C2orf88-202ENST00000396974 RXRBP28702 533 aa11.38□□□□□ -0.59
C2orf88-202ENST00000396974 SLAIN2Q9P270 581 aa11.38□□□□□ -0.59
C2orf88-202ENST00000396974 TET3O43151 1660 aa11.38□□□□□ -0.59
C2orf88-202ENST00000396974 SHPRHQ149N8 1683 aa11.38□□□□□ -0.59
C2orf88-202ENST00000396974 PRDM15P57071 1507 aaPredicted RBP11.38□□□□□ -0.59
C2orf88-202ENST00000396974 SETBP1Q9Y6X0 1596 aa11.37□□□□□ -0.59
C2orf88-202ENST00000396974 SPATA31A6Q5VVP1 1343 aa11.36□□□□□ -0.59
C2orf88-202ENST00000396974 PIK3C2BO00750 1634 aa11.36□□□□□ -0.59
C2orf88-202ENST00000396974 KCNA6P17658 529 aa11.36□□□□□ -0.59
C2orf88-202ENST00000396974 PROSER2Q86WR7 435 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms