RNA–Protein interactions for RNA: ENST00000396974.2

C2orf88-202, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-202ENST00000396974 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
C2orf88-202ENST00000396974 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
C2orf88-202ENST00000396974 NISCHQ9Y2I1 1504 aa18.16■□□□□ 0.5
C2orf88-202ENST00000396974 ABCC9O60706 1549 aa17.14■□□□□ 0.33
C2orf88-202ENST00000396974 SENP3Q9H4L4 574 aaPredicted RBP16.81■□□□□ 0.28
C2orf88-202ENST00000396974 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
C2orf88-202ENST00000396974 CCDC180Q9P1Z9 1646 aa16.56■□□□□ 0.24
C2orf88-202ENST00000396974 PHF23Q9BUL5 403 aaPredicted RBP16.55■□□□□ 0.24
C2orf88-202ENST00000396974 RB1CC1Q8TDY2 1594 aa16■□□□□ 0.15
C2orf88-202ENST00000396974 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
C2orf88-202ENST00000396974 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
C2orf88-202ENST00000396974 NACADO15069 1562 aa15.75■□□□□ 0.11
C2orf88-202ENST00000396974 FOXD1Q16676 465 aa15.7■□□□□ 0.1
C2orf88-202ENST00000396974 BICRAQ9NZM4 1560 aa15.68■□□□□ 0.1
C2orf88-202ENST00000396974 DNAJC5Q9H3Z4 198 aa15.68■□□□□ 0.1
C2orf88-202ENST00000396974 DCAF8L2P0C7V8 631 aa15.53■□□□□ 0.08
C2orf88-202ENST00000396974 CC2D2AQ9P2K1 1620 aa15.48■□□□□ 0.07
C2orf88-202ENST00000396974 CECR2Q9BXF3 1484 aa15.47■□□□□ 0.07
C2orf88-202ENST00000396974 MYO15BQ96JP2 1530 aa15.34■□□□□ 0.05
C2orf88-202ENST00000396974 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
C2orf88-202ENST00000396974 SHROOM4Q9ULL8 1493 aa15.24■□□□□ 0.03
C2orf88-202ENST00000396974 SCRIBQ14160 1630 aa15.06■□□□□ 0
C2orf88-202ENST00000396974 POTEDQ86YR6 584 aa14.98□□□□□ -0.01
C2orf88-202ENST00000396974 CUX2O14529 1486 aa14.95□□□□□ -0.02
C2orf88-202ENST00000396974 DCAF1Q9Y4B6 1507 aa14.93□□□□□ -0.02
C2orf88-202ENST00000396974 ZCCHC6Q5VYS8 1495 aaKnown RBP14.92□□□□□ -0.02
C2orf88-202ENST00000396974 MSH5O43196 834 aa14.82□□□□□ -0.04
C2orf88-202ENST00000396974 ERCC6Q03468 1493 aa14.76□□□□□ -0.05
C2orf88-202ENST00000396974 TRIM41Q8WV44 630 aa14.71□□□□□ -0.05
C2orf88-202ENST00000396974 PIAS4Q8N2W9 510 aaPredicted RBP14.63□□□□□ -0.07
C2orf88-202ENST00000396974 NESP48681 1621 aa14.6□□□□□ -0.07
C2orf88-202ENST00000396974 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
C2orf88-202ENST00000396974 THOC2Q8NI27 1593 aaKnown RBP14.56□□□□□ -0.08
C2orf88-202ENST00000396974 PLPPR3Q6T4P5 718 aa14.54□□□□□ -0.08
C2orf88-202ENST00000396974 ATAD2BQ9ULI0 1458 aa14.45□□□□□ -0.1
C2orf88-202ENST00000396974 PPP6R1Q9UPN7 881 aa14.43□□□□□ -0.1
C2orf88-202ENST00000396974 KIF21AQ7Z4S6 1674 aa14.41□□□□□ -0.1
C2orf88-202ENST00000396974 HMGXB3Q12766 1538 aa14.4□□□□□ -0.1
C2orf88-202ENST00000396974 ADRA2BP18089 450 aa14.39□□□□□ -0.11
C2orf88-202ENST00000396974 SMARCA2P51531 1590 aa14.39□□□□□ -0.11
C2orf88-202ENST00000396974 LAMC3Q9Y6N6 1575 aa14.33□□□□□ -0.12
C2orf88-202ENST00000396974 SMARCA4P51532 1647 aa14.31□□□□□ -0.12
C2orf88-202ENST00000396974 BAZ1AQ9NRL2 1556 aaPredicted RBP14.26□□□□□ -0.13
C2orf88-202ENST00000396974 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
C2orf88-202ENST00000396974 PDS5BQ9NTI5 1447 aa14.22□□□□□ -0.13
C2orf88-202ENST00000396974 WDR62O43379 1518 aa14.19□□□□□ -0.14
C2orf88-202ENST00000396974 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
C2orf88-202ENST00000396974 OSCARQ8IYS5 282 aa14.17□□□□□ -0.14
C2orf88-202ENST00000396974 MRC2Q9UBG0 1479 aa14.17□□□□□ -0.14
C2orf88-202ENST00000396974 RIMBP3CA6NJZ7 1639 aa14.14□□□□□ -0.15
C2orf88-202ENST00000396974 RIMBP3BA6NNM3 1639 aa14.14□□□□□ -0.15
C2orf88-202ENST00000396974 RIMBP3Q9UFD9 1639 aa14.14□□□□□ -0.15
C2orf88-202ENST00000396974 CADPSQ9ULU8 1353 aa14.08□□□□□ -0.16
C2orf88-202ENST00000396974 MROH2BQ7Z745 1585 aa14.02□□□□□ -0.16
C2orf88-202ENST00000396974 ARHGEF11O15085 1522 aa14□□□□□ -0.17
C2orf88-202ENST00000396974 CEP164Q9UPV0 1460 aa13.98□□□□□ -0.17
C2orf88-202ENST00000396974 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
C2orf88-202ENST00000396974 CYB5RLQ6IPT4 315 aa13.91□□□□□ -0.18
C2orf88-202ENST00000396974 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
C2orf88-202ENST00000396974 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
C2orf88-202ENST00000396974 WIZO95785 1651 aa13.85□□□□□ -0.19
C2orf88-202ENST00000396974 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
C2orf88-202ENST00000396974 ARAP1Q96P48 1450 aa13.84□□□□□ -0.19
C2orf88-202ENST00000396974 CFTRP13569 1480 aa13.81□□□□□ -0.2
C2orf88-202ENST00000396974 CHD1O14646 1710 aa13.77□□□□□ -0.21
C2orf88-202ENST00000396974 EIF4G3O43432 1585 aaKnown RBP13.72□□□□□ -0.21
C2orf88-202ENST00000396974 IFT140Q96RY7 1462 aa13.71□□□□□ -0.21
C2orf88-202ENST00000396974 PRDM2Q13029 1718 aa13.7□□□□□ -0.22
C2orf88-202ENST00000396974 RSF1Q96T23 1441 aaPredicted RBP13.67□□□□□ -0.22
C2orf88-202ENST00000396974 TOPBP1Q92547 1522 aa13.63□□□□□ -0.23
C2orf88-202ENST00000396974 AQRO60306 1485 aaKnown RBP eCLIP13.62□□□□□ -0.23
C2orf88-202ENST00000396974 TARBP1Q13395 1621 aaKnown RBP13.6□□□□□ -0.23
C2orf88-202ENST00000396974 FBLN2P98095 1184 aa13.57□□□□□ -0.24
C2orf88-202ENST00000396974 CLASP1Q7Z460 1538 aa13.56□□□□□ -0.24
C2orf88-202ENST00000396974 TOP2AP11388 1531 aaKnown RBP13.55□□□□□ -0.24
C2orf88-202ENST00000396974 DNMBPQ6XZF7 1577 aa13.5□□□□□ -0.25
C2orf88-202ENST00000396974 ILDR1Q86SU0 546 aaPredicted RBP13.49□□□□□ -0.25
C2orf88-202ENST00000396974 ABCC8Q09428 1581 aa13.47□□□□□ -0.25
C2orf88-202ENST00000396974 CCDC88BA6NC98 1476 aa13.44□□□□□ -0.26
C2orf88-202ENST00000396974 POLA1P09884 1462 aaPredicted RBP13.44□□□□□ -0.26
C2orf88-202ENST00000396974 SNAPC4Q5SXM2 1469 aa13.43□□□□□ -0.26
C2orf88-202ENST00000396974 RAD54L2Q9Y4B4 1467 aa13.43□□□□□ -0.26
C2orf88-202ENST00000396974 SYNJ1O43426 1573 aa13.42□□□□□ -0.26
C2orf88-202ENST00000396974 TDRD9Q8NDG6 1382 aaKnown RBP13.42□□□□□ -0.26
C2orf88-202ENST00000396974 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
C2orf88-202ENST00000396974 KIF13AQ9H1H9 1805 aa13.39□□□□□ -0.27
C2orf88-202ENST00000396974 ERCC6L2Q5T890 1561 aa13.37□□□□□ -0.27
C2orf88-202ENST00000396974 CHMP7Q8WUX9 453 aaPredicted RBP13.36□□□□□ -0.27
C2orf88-202ENST00000396974 SOGA1O94964 1423 aa13.35□□□□□ -0.27
C2orf88-202ENST00000396974 MAGI1Q96QZ7 1491 aaPredicted RBP13.35□□□□□ -0.27
C2orf88-202ENST00000396974 SYNJ2O15056 1496 aa13.32□□□□□ -0.28
C2orf88-202ENST00000396974 KDM4FA0A1W2PPD8 638 aa13.32□□□□□ -0.28
C2orf88-202ENST00000396974 WDR97A6NE52 1622 aa13.31□□□□□ -0.28
C2orf88-202ENST00000396974 MAPK8IP2Q13387 824 aaPredicted RBP13.3□□□□□ -0.28
C2orf88-202ENST00000396974 GRIN2BQ13224 1484 aa13.28□□□□□ -0.28
C2orf88-202ENST00000396974 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
C2orf88-202ENST00000396974 PBRM1Q86U86 1689 aa13.27□□□□□ -0.29
C2orf88-202ENST00000396974 DMRT2Q9Y5R5 561 aa13.26□□□□□ -0.29
C2orf88-202ENST00000396974 CEP170Q5SW79 1584 aa13.21□□□□□ -0.29
C2orf88-202ENST00000396974 CUX1P39880 1505 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms