RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 COL17A1Q9UMD9 1497 aaPredicted RBP29.89■■■□□ 2.38
VCPKMT-202ENST00000395860 MAGI2Q86UL8 1455 aa29.88■■■□□ 2.37
VCPKMT-202ENST00000395860 DEPDC5O75140 1603 aa29.86■■■□□ 2.37
VCPKMT-202ENST00000395860 YEATS2Q9ULM3 1422 aa29.85■■■□□ 2.37
VCPKMT-202ENST00000395860 IQGAP3Q86VI3 1631 aa29.85■■■□□ 2.37
VCPKMT-202ENST00000395860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.85■■■□□ 2.37
VCPKMT-202ENST00000395860 FAM135AQ9P2D6 1515 aa29.84■■■□□ 2.37
VCPKMT-202ENST00000395860 KIF3BO15066 747 aa29.82■■■□□ 2.36
VCPKMT-202ENST00000395860 BCORL1Q5H9F3 1711 aa29.8■■■□□ 2.36
VCPKMT-202ENST00000395860 RNF17Q9BXT8 1623 aaKnown RBP29.77■■■□□ 2.36
VCPKMT-202ENST00000395860 FOXD1Q16676 465 aa29.77■■■□□ 2.36
VCPKMT-202ENST00000395860 PKD2Q13563 968 aa29.76■■■□□ 2.35
VCPKMT-202ENST00000395860 SIN3AQ96ST3 1273 aa29.76■■■□□ 2.35
VCPKMT-202ENST00000395860 PRDM15P57071 1507 aaPredicted RBP29.76■■■□□ 2.35
VCPKMT-202ENST00000395860 ATP10AO60312 1499 aa29.75■■■□□ 2.35
VCPKMT-202ENST00000395860 MROH1Q8NDA8 1641 aa29.75■■■□□ 2.35
VCPKMT-202ENST00000395860 ARHGEF40Q8TER5 1519 aa29.74■■■□□ 2.35
VCPKMT-202ENST00000395860 KANK1Q14678 1352 aa29.73■■■□□ 2.35
VCPKMT-202ENST00000395860 NEUROD1Q13562 356 aa29.72■■■□□ 2.35
VCPKMT-202ENST00000395860 REREQ9P2R6 1566 aa29.71■■■□□ 2.35
VCPKMT-202ENST00000395860 VWDEQ8N2E2 1590 aa29.71■■■□□ 2.35
VCPKMT-202ENST00000395860 ANKRD30BQ9BXX2 1392 aa29.69■■■□□ 2.34
VCPKMT-202ENST00000395860 TET3O43151 1660 aa29.67■■■□□ 2.34
VCPKMT-202ENST00000395860 CEP152O94986 1710 aa29.65■■■□□ 2.34
VCPKMT-202ENST00000395860 GGT6Q6P531 493 aa29.64■■■□□ 2.34
VCPKMT-202ENST00000395860 E9PCH4 1651 aa29.63■■■□□ 2.33
VCPKMT-202ENST00000395860 AGLP35573 1532 aa29.62■■■□□ 2.33
VCPKMT-202ENST00000395860 SIGLEC1Q9BZZ2 1709 aa29.6■■■□□ 2.33
VCPKMT-202ENST00000395860 LMTK2Q8IWU2 1503 aa29.58■■■□□ 2.33
VCPKMT-202ENST00000395860 TIMELESSQ9UNS1 1208 aa29.58■■■□□ 2.33
VCPKMT-202ENST00000395860 TONSLQ96HA7 1378 aa29.57■■■□□ 2.32
VCPKMT-202ENST00000395860 RPRD2Q5VT52 1461 aaKnown RBP29.56■■■□□ 2.32
VCPKMT-202ENST00000395860 ZC3H13Q5T200 1668 aaKnown RBP29.56■■■□□ 2.32
VCPKMT-202ENST00000395860 EFCAB6Q5THR3 1501 aa29.54■■■□□ 2.32
VCPKMT-202ENST00000395860 ABCC3O15438 1527 aa29.54■■■□□ 2.32
VCPKMT-202ENST00000395860 WASHC2CQ9Y4E1 1318 aa29.52■■■□□ 2.32
VCPKMT-202ENST00000395860 SPHKAPQ2M3C7 1700 aa29.52■■■□□ 2.32
VCPKMT-202ENST00000395860 CAMSAP1Q5T5Y3 1602 aa29.51■■■□□ 2.31
VCPKMT-202ENST00000395860 PLA2R1Q13018 1463 aa29.47■■■□□ 2.31
VCPKMT-202ENST00000395860 CCDC144AA2RUR9 1427 aa29.46■■■□□ 2.31
VCPKMT-202ENST00000395860 TRPM2O94759 1503 aa29.43■■■□□ 2.3
VCPKMT-202ENST00000395860 PPP6R1Q9UPN7 881 aa29.42■■■□□ 2.3
VCPKMT-202ENST00000395860 CFAP65Q6ZU64 1925 aaKnown RBP29.42■■■□□ 2.3
VCPKMT-202ENST00000395860 ARID4BQ4LE39 1312 aaPredicted RBP29.42■■■□□ 2.3
VCPKMT-202ENST00000395860 PTPRTO14522 1441 aa29.42■■■□□ 2.3
VCPKMT-202ENST00000395860 MLECQ14165 292 aa29.41■■■□□ 2.3
VCPKMT-202ENST00000395860 NPATQ14207 1427 aa29.4■■■□□ 2.3
VCPKMT-202ENST00000395860 CLTCQ00610 1675 aaKnown RBP29.4■■■□□ 2.3
VCPKMT-202ENST00000395860 PPP1R15AO75807 674 aaPredicted RBP29.38■■■□□ 2.29
VCPKMT-202ENST00000395860 ARHGAP31Q2M1Z3 1444 aa29.36■■■□□ 2.29
VCPKMT-202ENST00000395860 L3MBTL2Q969R5 705 aa29.36■■■□□ 2.29
VCPKMT-202ENST00000395860 CLTCL1P53675 1640 aa29.35■■■□□ 2.29
VCPKMT-202ENST00000395860 ESF1Q9H501 851 aaKnown RBP29.3■■■□□ 2.28
VCPKMT-202ENST00000395860 PREX1Q8TCU6 1659 aa29.29■■■□□ 2.28
VCPKMT-202ENST00000395860 CNTLNQ9NXG0 1405 aa29.29■■■□□ 2.28
VCPKMT-202ENST00000395860 KIF1BO60333 1816 aa29.29■■■□□ 2.28
VCPKMT-202ENST00000395860 UGGT1Q9NYU2 1555 aa29.27■■■□□ 2.28
VCPKMT-202ENST00000395860 NOS1P29475 1434 aa29.26■■■□□ 2.27
VCPKMT-202ENST00000395860 SYNMO15061 1565 aa29.23■■■□□ 2.27
VCPKMT-202ENST00000395860 MROH2AA6NES4 1674 aa29.21■■■□□ 2.27
VCPKMT-202ENST00000395860 RGL3Q3MIN7 710 aa29.21■■■□□ 2.27
VCPKMT-202ENST00000395860 SPATA31E1Q6ZUB1 1445 aa29.21■■■□□ 2.27
VCPKMT-202ENST00000395860 FER1L4A9Z1Z3 1794 aa29.21■■■□□ 2.27
VCPKMT-202ENST00000395860 PIK3C2BO00750 1634 aa29.2■■■□□ 2.26
VCPKMT-202ENST00000395860 NEURL4Q96JN8 1562 aa29.19■■■□□ 2.26
VCPKMT-202ENST00000395860 ERVK-7P63135 1459 aa29.18■■■□□ 2.26
VCPKMT-202ENST00000395860 ZMYM3Q14202 1370 aa29.17■■■□□ 2.26
VCPKMT-202ENST00000395860 DCAF11Q8TEB1 546 aa29.17■■■□□ 2.26
VCPKMT-202ENST00000395860 SPATA31D1Q6ZQQ2 1576 aa29.15■■■□□ 2.26
VCPKMT-202ENST00000395860 FBXO31Q5XUX0 539 aaPredicted RBP29.15■■■□□ 2.26
VCPKMT-202ENST00000395860 KDM2AQ9Y2K7 1162 aa29.13■■■□□ 2.25
VCPKMT-202ENST00000395860 ADGRB3O60242 1522 aa29.12■■■□□ 2.25
VCPKMT-202ENST00000395860 NBPF8Q3BBV2 869 aa29.12■■■□□ 2.25
VCPKMT-202ENST00000395860 UHRF1BP1Q6BDS2 1440 aa29.11■■■□□ 2.25
VCPKMT-202ENST00000395860 ZNF326Q5BKZ1 582 aaKnown RBP29.11■■■□□ 2.25
VCPKMT-202ENST00000395860 SLC52A1Q9NWF4 448 aa29.11■■■□□ 2.25
VCPKMT-202ENST00000395860 CHGAP10645 457 aaKnown RBP29.09■■■□□ 2.25
VCPKMT-202ENST00000395860 C3P01024 1663 aa29.08■■■□□ 2.25
VCPKMT-202ENST00000395860 IDI1Q13907 227 aa29.06■■■□□ 2.24
VCPKMT-202ENST00000395860 IFT172Q9UG01 1749 aa29.06■■■□□ 2.24
VCPKMT-202ENST00000395860 MADDQ8WXG6 1647 aa29.05■■■□□ 2.24
VCPKMT-202ENST00000395860 ZNF316A6NFI3 1004 aaPredicted RBP29.05■■■□□ 2.24
VCPKMT-202ENST00000395860 MYO5BQ9ULV0 1848 aa29.04■■■□□ 2.24
VCPKMT-202ENST00000395860 PRAG1Q86YV5 1406 aa29.03■■■□□ 2.24
VCPKMT-202ENST00000395860 ADAMTSL3P82987 1691 aa29.03■■■□□ 2.24
VCPKMT-202ENST00000395860 RIMS1Q86UR5 1692 aaKnown RBP29.02■■■□□ 2.24
VCPKMT-202ENST00000395860 TMEM131LA2VDJ0 1609 aa29.01■■■□□ 2.24
VCPKMT-202ENST00000395860 PPLO60437 1756 aa29.01■■■□□ 2.24
VCPKMT-202ENST00000395860 STAC3Q96MF2 364 aa29.01■■■□□ 2.23
VCPKMT-202ENST00000395860 TRPM1Q7Z4N2 1603 aa29■■■□□ 2.23
VCPKMT-202ENST00000395860 RALGAPBQ86X10 1494 aa28.98■■■□□ 2.23
VCPKMT-202ENST00000395860 TNRQ92752 1358 aa28.97■■■□□ 2.23
VCPKMT-202ENST00000395860 MYOM2P54296 1465 aa28.97■■■□□ 2.23
VCPKMT-202ENST00000395860 CEBPAP49715 358 aaPredicted RBP28.96■■■□□ 2.23
VCPKMT-202ENST00000395860 RPGRIP1LQ68CZ1 1315 aa28.95■■■□□ 2.22
VCPKMT-202ENST00000395860 STAG3Q9UJ98 1225 aa28.93■■■□□ 2.22
VCPKMT-202ENST00000395860 PLPPR3Q6T4P5 718 aa28.92■■■□□ 2.22
VCPKMT-202ENST00000395860 NEXMIFQ5QGS0 1516 aa28.92■■■□□ 2.22
VCPKMT-202ENST00000395860 ROCK2O75116 1388 aaKnown RBP28.89■■■□□ 2.21
VCPKMT-202ENST00000395860 KDM5AP29375 1690 aaKnown RBP28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms