RNA–Protein interactions for RNA: ENST00000395829.1

TRABD-204, Transcript of TraB domain containing, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRABD, Length 1,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-204ENST00000395829 COL17A1Q9UMD9 1497 aaPredicted RBP30.04■■■□□ 2.4
TRABD-204ENST00000395829 IQGAP3Q86VI3 1631 aa30.02■■■□□ 2.4
TRABD-204ENST00000395829 NUP155O75694 1391 aa30.01■■■□□ 2.39
TRABD-204ENST00000395829 BCORL1Q5H9F3 1711 aa30.01■■■□□ 2.39
TRABD-204ENST00000395829 FAM135AQ9P2D6 1515 aa29.99■■■□□ 2.39
TRABD-204ENST00000395829 YEATS2Q9ULM3 1422 aa29.98■■■□□ 2.39
TRABD-204ENST00000395829 SLC4A1APQ9BWU0 796 aaKnown RBP29.97■■■□□ 2.39
TRABD-204ENST00000395829 RNF17Q9BXT8 1623 aaKnown RBP29.96■■■□□ 2.39
TRABD-204ENST00000395829 MROH1Q8NDA8 1641 aa29.94■■■□□ 2.38
TRABD-204ENST00000395829 PRDM15P57071 1507 aaPredicted RBP29.93■■■□□ 2.38
TRABD-204ENST00000395829 VWDEQ8N2E2 1590 aa29.9■■■□□ 2.38
TRABD-204ENST00000395829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.89■■■□□ 2.389e-7■□□□□ 9.1
TRABD-204ENST00000395829 ARHGEF40Q8TER5 1519 aa29.89■■■□□ 2.38
TRABD-204ENST00000395829 REREQ9P2R6 1566 aa29.89■■■□□ 2.38
TRABD-204ENST00000395829 KIF3BO15066 747 aa29.89■■■□□ 2.37
TRABD-204ENST00000395829 FOXD1Q16676 465 aa29.87■■■□□ 2.37
TRABD-204ENST00000395829 ATP10AO60312 1499 aa29.86■■■□□ 2.37
TRABD-204ENST00000395829 SIN3AQ96ST3 1273 aa29.85■■■□□ 2.37
TRABD-204ENST00000395829 PKD2Q13563 968 aa29.85■■■□□ 2.37
TRABD-204ENST00000395829 TET3O43151 1660 aa29.83■■■□□ 2.37
TRABD-204ENST00000395829 ANKRD30BQ9BXX2 1392 aa29.83■■■□□ 2.37
TRABD-204ENST00000395829 CEP152O94986 1710 aa29.83■■■□□ 2.37
TRABD-204ENST00000395829 SIGLEC1Q9BZZ2 1709 aa29.81■■■□□ 2.36
TRABD-204ENST00000395829 E9PCH4 1651 aa29.8■■■□□ 2.36
TRABD-204ENST00000395829 KANK1Q14678 1352 aa29.79■■■□□ 2.36
TRABD-204ENST00000395829 NEUROD1Q13562 356 aa29.78■■■□□ 2.36
TRABD-204ENST00000395829 AGLP35573 1532 aa29.76■■■□□ 2.35
TRABD-204ENST00000395829 LMTK2Q8IWU2 1503 aa29.75■■■□□ 2.35
TRABD-204ENST00000395829 ZC3H13Q5T200 1668 aaKnown RBP29.72■■■□□ 2.35
TRABD-204ENST00000395829 EFCAB6Q5THR3 1501 aa29.71■■■□□ 2.35
TRABD-204ENST00000395829 RPRD2Q5VT52 1461 aaKnown RBP29.71■■■□□ 2.35
TRABD-204ENST00000395829 SPHKAPQ2M3C7 1700 aa29.69■■■□□ 2.34
TRABD-204ENST00000395829 GGT6Q6P531 493 aa29.69■■■□□ 2.34
TRABD-204ENST00000395829 ABCC3O15438 1527 aa29.68■■■□□ 2.34
TRABD-204ENST00000395829 TIMELESSQ9UNS1 1208 aa29.67■■■□□ 2.34
TRABD-204ENST00000395829 CAMSAP1Q5T5Y3 1602 aa29.67■■■□□ 2.34
TRABD-204ENST00000395829 TONSLQ96HA7 1378 aa29.64■■■□□ 2.34
TRABD-204ENST00000395829 PLA2R1Q13018 1463 aa29.64■■■□□ 2.34
TRABD-204ENST00000395829 TRPM2O94759 1503 aa29.59■■■□□ 2.33
TRABD-204ENST00000395829 WASHC2CQ9Y4E1 1318 aa29.59■■■□□ 2.33
TRABD-204ENST00000395829 PTPRTO14522 1441 aa29.57■■■□□ 2.32
TRABD-204ENST00000395829 CFAP65Q6ZU64 1925 aaKnown RBP29.56■■■□□ 2.32
TRABD-204ENST00000395829 CLTCQ00610 1675 aaKnown RBP29.56■■■□□ 2.32
TRABD-204ENST00000395829 CCDC144AA2RUR9 1427 aa29.56■■■□□ 2.32
TRABD-204ENST00000395829 NPATQ14207 1427 aa29.53■■■□□ 2.32
TRABD-204ENST00000395829 CLTCL1P53675 1640 aa29.52■■■□□ 2.32
TRABD-204ENST00000395829 PPP6R1Q9UPN7 881 aa29.5■■■□□ 2.31
TRABD-204ENST00000395829 ARHGAP31Q2M1Z3 1444 aa29.5■■■□□ 2.31
TRABD-204ENST00000395829 PPP1R15AO75807 674 aaPredicted RBP29.49■■■□□ 2.31
TRABD-204ENST00000395829 L3MBTL2Q969R5 705 aa29.46■■■□□ 2.31
TRABD-204ENST00000395829 PREX1Q8TCU6 1659 aa29.46■■■□□ 2.31
TRABD-204ENST00000395829 MLECQ14165 292 aa29.45■■■□□ 2.3
TRABD-204ENST00000395829 KIF1BO60333 1816 aa29.44■■■□□ 2.3
TRABD-204ENST00000395829 ARID4BQ4LE39 1312 aaPredicted RBP29.44■■■□□ 2.3
TRABD-204ENST00000395829 UGGT1Q9NYU2 1555 aa29.42■■■□□ 2.3
TRABD-204ENST00000395829 CNTLNQ9NXG0 1405 aa29.41■■■□□ 2.3
TRABD-204ENST00000395829 SYNMO15061 1565 aa29.4■■■□□ 2.3
TRABD-204ENST00000395829 NOS1P29475 1434 aa29.4■■■□□ 2.3
TRABD-204ENST00000395829 MROH2AA6NES4 1674 aa29.38■■■□□ 2.29
TRABD-204ENST00000395829 PIK3C2BO00750 1634 aa29.38■■■□□ 2.29
TRABD-204ENST00000395829 NEURL4Q96JN8 1562 aa29.37■■■□□ 2.29
TRABD-204ENST00000395829 FER1L4A9Z1Z3 1794 aa29.36■■■□□ 2.29
TRABD-204ENST00000395829 SPATA31E1Q6ZUB1 1445 aa29.36■■■□□ 2.29
TRABD-204ENST00000395829 ERVK-7P63135 1459 aa29.31■■■□□ 2.28
TRABD-204ENST00000395829 SPATA31D1Q6ZQQ2 1576 aa29.3■■■□□ 2.28
TRABD-204ENST00000395829 ESF1Q9H501 851 aaKnown RBP29.3■■■□□ 2.28
TRABD-204ENST00000395829 ADGRB3O60242 1522 aa29.28■■■□□ 2.28
TRABD-204ENST00000395829 IFT172Q9UG01 1749 aa29.28■■■□□ 2.28
TRABD-204ENST00000395829 RGL3Q3MIN7 710 aa29.27■■■□□ 2.28
TRABD-204ENST00000395829 ZMYM3Q14202 1370 aa29.26■■■□□ 2.27
TRABD-204ENST00000395829 UHRF1BP1Q6BDS2 1440 aa29.26■■■□□ 2.27
TRABD-204ENST00000395829 NBPF8Q3BBV2 869 aa29.24■■■□□ 2.27
TRABD-204ENST00000395829 DCAF11Q8TEB1 546 aa29.24■■■□□ 2.27
TRABD-204ENST00000395829 C3P01024 1663 aa29.24■■■□□ 2.27
TRABD-204ENST00000395829 FBXO31Q5XUX0 539 aaPredicted RBP29.23■■■□□ 2.27
TRABD-204ENST00000395829 MYO5BQ9ULV0 1848 aa29.23■■■□□ 2.27
TRABD-204ENST00000395829 PPLO60437 1756 aa29.19■■■□□ 2.26
TRABD-204ENST00000395829 MADDQ8WXG6 1647 aa29.19■■■□□ 2.26
TRABD-204ENST00000395829 KDM2AQ9Y2K7 1162 aa29.19■■■□□ 2.26
TRABD-204ENST00000395829 ADAMTSL3P82987 1691 aa29.19■■■□□ 2.26
TRABD-204ENST00000395829 TMEM131LA2VDJ0 1609 aa29.18■■■□□ 2.26
TRABD-204ENST00000395829 SLC52A1Q9NWF4 448 aa29.18■■■□□ 2.26
TRABD-204ENST00000395829 TRPM1Q7Z4N2 1603 aa29.17■■■□□ 2.26
TRABD-204ENST00000395829 RIMS1Q86UR5 1692 aaKnown RBP29.16■■■□□ 2.26
TRABD-204ENST00000395829 PRAG1Q86YV5 1406 aa29.16■■■□□ 2.26
TRABD-204ENST00000395829 IDI1Q13907 227 aa29.15■■■□□ 2.26
TRABD-204ENST00000395829 ZNF326Q5BKZ1 582 aaKnown RBP29.15■■■□□ 2.26
TRABD-204ENST00000395829 ZNF316A6NFI3 1004 aaPredicted RBP29.14■■■□□ 2.26
TRABD-204ENST00000395829 RALGAPBQ86X10 1494 aa29.14■■■□□ 2.25
TRABD-204ENST00000395829 CHGAP10645 457 aaKnown RBP29.12■■■□□ 2.25
TRABD-204ENST00000395829 MYOM2P54296 1465 aa29.11■■■□□ 2.25
TRABD-204ENST00000395829 STAC3Q96MF2 364 aa29.09■■■□□ 2.25
TRABD-204ENST00000395829 NEXMIFQ5QGS0 1516 aa29.07■■■□□ 2.24
TRABD-204ENST00000395829 TNRQ92752 1358 aa29.07■■■□□ 2.24
TRABD-204ENST00000395829 KDM5AP29375 1690 aaKnown RBP29.06■■■□□ 2.24
TRABD-204ENST00000395829 KIAA1210Q9ULL0 1709 aa29.05■■■□□ 2.24
TRABD-204ENST00000395829 RPGRIP1LQ68CZ1 1315 aa29.04■■■□□ 2.24
TRABD-204ENST00000395829 CEBPAP49715 358 aaPredicted RBP29.03■■■□□ 2.24
TRABD-204ENST00000395829 NRXN1Q9ULB1 1477 aa29.03■■■□□ 2.24
TRABD-204ENST00000395829 LAMC1P11047 1609 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 249.5 ms