RNA–Protein interactions for RNA: ENST00000395525.7

SPECC1-203, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-203ENST00000395525 SALL2Q9Y467 1007 aaPredicted RBP23.48■■□□□ 1.35
SPECC1-203ENST00000395525 LRPPRCP42704 1394 aaKnown RBP23.47■■□□□ 1.35
SPECC1-203ENST00000395525 MYBBP1AQ9BQG0 1328 aaKnown RBP23.46■■□□□ 1.35
SPECC1-203ENST00000395525 PTPRGP23470 1445 aa23.46■■□□□ 1.35
SPECC1-203ENST00000395525 PAK3O75914 559 aaPredicted RBP23.46■■□□□ 1.35
SPECC1-203ENST00000395525 E9PCH4 1651 aa23.43■■□□□ 1.34
SPECC1-203ENST00000395525 RGL3Q3MIN7 710 aa23.43■■□□□ 1.34
SPECC1-203ENST00000395525 BRD4O60885 1362 aaPredicted RBP23.43■■□□□ 1.34
SPECC1-203ENST00000395525 NBPF1Q3BBV0 1214 aa23.42■■□□□ 1.34
SPECC1-203ENST00000395525 FAM135AQ9P2D6 1515 aa23.41■■□□□ 1.34
SPECC1-203ENST00000395525 RALBP1Q15311 655 aa23.4■■□□□ 1.34
SPECC1-203ENST00000395525 NOP58Q9Y2X3 529 aaKnown RBP23.4■■□□□ 1.34
SPECC1-203ENST00000395525 SAMD9LQ8IVG5 1584 aa23.39■■□□□ 1.34
SPECC1-203ENST00000395525 ARHGEF5Q12774 1597 aa23.38■■□□□ 1.33
SPECC1-203ENST00000395525 PRAG1Q86YV5 1406 aa23.37■■□□□ 1.33
SPECC1-203ENST00000395525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.36■■□□□ 1.33
SPECC1-203ENST00000395525 CDC42BPBQ9Y5S2 1711 aa23.36■■□□□ 1.33
SPECC1-203ENST00000395525 EXOC6Q8TAG9 804 aa23.36■■□□□ 1.33
SPECC1-203ENST00000395525 CCDC141Q6ZP82 1450 aa23.36■■□□□ 1.33
SPECC1-203ENST00000395525 TRPM1Q7Z4N2 1603 aa23.36■■□□□ 1.33
SPECC1-203ENST00000395525 RRP1P56182 461 aaKnown RBP23.35■■□□□ 1.33
SPECC1-203ENST00000395525 CCDC144AA2RUR9 1427 aa23.34■■□□□ 1.33
SPECC1-203ENST00000395525 NBR1Q14596 966 aa23.33■■□□□ 1.33
SPECC1-203ENST00000395525 PLA2R1Q13018 1463 aa23.33■■□□□ 1.33
SPECC1-203ENST00000395525 PARD3Q8TEW0 1356 aa23.33■■□□□ 1.32
SPECC1-203ENST00000395525 KTN1Q86UP2 1357 aaKnown RBP23.32■■□□□ 1.32
SPECC1-203ENST00000395525 NLRP13Q86W25 1043 aa23.32■■□□□ 1.32
SPECC1-203ENST00000395525 CDCA7LQ96GN5 454 aa23.32■■□□□ 1.32
SPECC1-203ENST00000395525 PER1O15534 1290 aaPredicted RBP23.31■■□□□ 1.32
SPECC1-203ENST00000395525 CC2D1BQ5T0F9 858 aaKnown RBP23.31■■□□□ 1.32
SPECC1-203ENST00000395525 RCAN3Q9UKA8 241 aa23.31■■□□□ 1.32
SPECC1-203ENST00000395525 DISP3Q9P2K9 1392 aa23.3■■□□□ 1.32
SPECC1-203ENST00000395525 SYCP2Q9BX26 1530 aa23.3■■□□□ 1.32
SPECC1-203ENST00000395525 A2MP01023 1474 aa23.3■■□□□ 1.32
SPECC1-203ENST00000395525 PREX2Q70Z35 1606 aa23.3■■□□□ 1.32
SPECC1-203ENST00000395525 TESK2Q96S53 571 aa23.26■■□□□ 1.31
SPECC1-203ENST00000395525 ANP32AP39687 249 aaKnown RBP23.26■■□□□ 1.31
SPECC1-203ENST00000395525 IPO9Q96P70 1041 aaKnown RBP23.25■■□□□ 1.31
SPECC1-203ENST00000395525 DEKP35659 375 aaKnown RBP23.25■■□□□ 1.31
SPECC1-203ENST00000395525 TTC37Q6PGP7 1564 aa23.24■■□□□ 1.31
SPECC1-203ENST00000395525 COL17A1Q9UMD9 1497 aaPredicted RBP23.24■■□□□ 1.31
SPECC1-203ENST00000395525 PLIN1O60240 522 aa23.23■■□□□ 1.31
SPECC1-203ENST00000395525 PANK3Q9H999 370 aa23.23■■□□□ 1.31
SPECC1-203ENST00000395525 PLEKHH2Q8IVE3 1493 aa23.23■■□□□ 1.31
SPECC1-203ENST00000395525 ARHGAP5Q13017 1502 aa23.22■■□□□ 1.31
SPECC1-203ENST00000395525 GPRASP1Q5JY77 1395 aa23.22■■□□□ 1.31
SPECC1-203ENST00000395525 UNC13BO14795 1591 aa23.21■■□□□ 1.31
SPECC1-203ENST00000395525 MYO5CQ9NQX4 1742 aa23.21■■□□□ 1.31
SPECC1-203ENST00000395525 PRDM15P57071 1507 aaPredicted RBP23.2■■□□□ 1.3
SPECC1-203ENST00000395525 NPM2Q86SE8 214 aaKnown RBP23.2■■□□□ 1.3
SPECC1-203ENST00000395525 RSPH4AQ5TD94 716 aa23.18■■□□□ 1.3
SPECC1-203ENST00000395525 SKAP1Q86WV1 359 aa23.18■■□□□ 1.3
SPECC1-203ENST00000395525 ERBINQ96RT1 1412 aa23.18■■□□□ 1.3
SPECC1-203ENST00000395525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.17■■□□□ 1.3
SPECC1-203ENST00000395525 PDE3BQ13370 1112 aa23.16■■□□□ 1.3
SPECC1-203ENST00000395525 ZBTB47Q9UFB7 747 aaPredicted RBP23.16■■□□□ 1.3
SPECC1-203ENST00000395525 IQGAP3Q86VI3 1631 aa23.14■■□□□ 1.29
SPECC1-203ENST00000395525 MAST1Q9Y2H9 1570 aa23.14■■□□□ 1.29
SPECC1-203ENST00000395525 BLMP54132 1417 aaPredicted RBP23.13■■□□□ 1.29
SPECC1-203ENST00000395525 MYT1LQ9UL68 1186 aa23.13■■□□□ 1.29
SPECC1-203ENST00000395525 LAMC1P11047 1609 aa23.12■■□□□ 1.29
SPECC1-203ENST00000395525 PDE4AP27815 886 aa23.11■■□□□ 1.29
SPECC1-203ENST00000395525 TMF1P82094 1093 aa23.11■■□□□ 1.29
SPECC1-203ENST00000395525 TCERG1O14776 1098 aaKnown RBP23.1■■□□□ 1.29
SPECC1-203ENST00000395525 CRBNQ96SW2 442 aa23.1■■□□□ 1.29
SPECC1-203ENST00000395525 PLXNC1O60486 1568 aa23.08■■□□□ 1.29
SPECC1-203ENST00000395525 ERCC6L2Q5T890 1561 aa23.08■■□□□ 1.29
SPECC1-203ENST00000395525 ADAMTS8Q9UP79 889 aa23.08■■□□□ 1.29
SPECC1-203ENST00000395525 WASHC2CQ9Y4E1 1318 aa23.08■■□□□ 1.29
SPECC1-203ENST00000395525 C20orf194Q5TEA3 1177 aa23.08■■□□□ 1.28
SPECC1-203ENST00000395525 EIF2AK4Q9P2K8 1649 aaKnown RBP23.07■■□□□ 1.28
SPECC1-203ENST00000395525 MAGI2Q86UL8 1455 aa23.06■■□□□ 1.28
SPECC1-203ENST00000395525 BACH2Q9BYV9 841 aa23.06■■□□□ 1.28
SPECC1-203ENST00000395525 CHD1O14646 1710 aa23.05■■□□□ 1.28
SPECC1-203ENST00000395525 DUOX2Q9NRD8 1548 aa23.04■■□□□ 1.28
SPECC1-203ENST00000395525 ZMYM4Q5VZL5 1548 aa23.03■■□□□ 1.28
SPECC1-203ENST00000395525 RNF17Q9BXT8 1623 aaKnown RBP23.03■■□□□ 1.28
SPECC1-203ENST00000395525 WDR7Q9Y4E6 1490 aa23.02■■□□□ 1.28
SPECC1-203ENST00000395525 ATP10AO60312 1499 aa23.02■■□□□ 1.28
SPECC1-203ENST00000395525 PLEKHH1Q9ULM0 1364 aa23.01■■□□□ 1.27
SPECC1-203ENST00000395525 PPP2R1AP30153 589 aa23■■□□□ 1.27
SPECC1-203ENST00000395525 LAS1LQ9Y4W2 734 aaKnown RBP22.99■■□□□ 1.27
SPECC1-203ENST00000395525 TRAPPC8Q9Y2L5 1435 aa22.99■■□□□ 1.27
SPECC1-203ENST00000395525 INSRP06213 1382 aa22.98■■□□□ 1.27
SPECC1-203ENST00000395525 KNSTRNQ9Y448 316 aa22.98■■□□□ 1.27
SPECC1-203ENST00000395525 ABCC2Q92887 1545 aa22.97■■□□□ 1.27
SPECC1-203ENST00000395525 MADDQ8WXG6 1647 aa22.97■■□□□ 1.27
SPECC1-203ENST00000395525 MS4A1P11836 297 aa22.97■■□□□ 1.27
SPECC1-203ENST00000395525 RTL5Q5HYW3 569 aaPredicted RBP22.97■■□□□ 1.27
SPECC1-203ENST00000395525 AMER1Q5JTC6 1135 aaPredicted RBP22.97■■□□□ 1.27
SPECC1-203ENST00000395525 SHROOM2Q13796 1616 aa22.95■■□□□ 1.26
SPECC1-203ENST00000395525 IQGAP1P46940 1657 aa22.94■■□□□ 1.26
SPECC1-203ENST00000395525 WDR43Q15061 677 aaKnown RBP eCLIP22.93■■□□□ 1.26
SPECC1-203ENST00000395525 DUSP27Q5VZP5 1158 aa22.93■■□□□ 1.26
SPECC1-203ENST00000395525 PLCH2O75038 1416 aa22.93■■□□□ 1.26
SPECC1-203ENST00000395525 AFAP1Q8N556 730 aa22.92■■□□□ 1.26
SPECC1-203ENST00000395525 EFCAB2Q5VUJ9 269 aa22.91■■□□□ 1.26
SPECC1-203ENST00000395525 CCDC146Q8IYE0 955 aa22.91■■□□□ 1.26
SPECC1-203ENST00000395525 ABCC1P33527 1531 aa22.9■■□□□ 1.26
SPECC1-203ENST00000395525 KDM2BQ8NHM5 1336 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms