RNA–Protein interactions for RNA: ENST00000395460.6

C11orf49-204, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 1 (best) BASIC

Gene C11orf49, Length 1,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-204ENST00000395460 BRD4O60885 1362 aaPredicted RBP22.5■■□□□ 1.19
C11orf49-204ENST00000395460 RALBP1Q15311 655 aa22.5■■□□□ 1.19
C11orf49-204ENST00000395460 LRPPRCP42704 1394 aaKnown RBP22.5■■□□□ 1.19
C11orf49-204ENST00000395460 GPRASP1Q5JY77 1395 aa22.47■■□□□ 1.19
C11orf49-204ENST00000395460 PRAG1Q86YV5 1406 aa22.47■■□□□ 1.19
C11orf49-204ENST00000395460 PLEKHH2Q8IVE3 1493 aa22.47■■□□□ 1.19
C11orf49-204ENST00000395460 ST20-MTHFSA0A0A6YYL1 179 aa22.47■■□□□ 1.19
C11orf49-204ENST00000395460 CCDC144AA2RUR9 1427 aa22.47■■□□□ 1.19
C11orf49-204ENST00000395460 PLXNC1O60486 1568 aa22.47■■□□□ 1.19
C11orf49-204ENST00000395460 LAMC1P11047 1609 aa22.47■■□□□ 1.19
C11orf49-204ENST00000395460 TRPM1Q7Z4N2 1603 aa22.46■■□□□ 1.19
C11orf49-204ENST00000395460 DCAF11Q8TEB1 546 aa22.46■■□□□ 1.19
C11orf49-204ENST00000395460 MYBBP1AQ9BQG0 1328 aaKnown RBP22.45■■□□□ 1.19
C11orf49-204ENST00000395460 SHROOM2Q13796 1616 aa22.45■■□□□ 1.18
C11orf49-204ENST00000395460 POLR3GLQ9BT43 218 aa22.45■■□□□ 1.18
C11orf49-204ENST00000395460 TMC1Q8TDI8 760 aa22.44■■□□□ 1.18
C11orf49-204ENST00000395460 SYCP2Q9BX26 1530 aa22.43■■□□□ 1.18
C11orf49-204ENST00000395460 ATP10AO60312 1499 aa22.43■■□□□ 1.18
C11orf49-204ENST00000395460 IQGAP3Q86VI3 1631 aa22.42■■□□□ 1.18
C11orf49-204ENST00000395460 MSH5O43196 834 aa22.41■■□□□ 1.18
C11orf49-204ENST00000395460 B4GALNT3Q6L9W6 998 aa22.41■■□□□ 1.18
C11orf49-204ENST00000395460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.41■■□□□ 1.18
C11orf49-204ENST00000395460 PLA2R1Q13018 1463 aa22.4■■□□□ 1.18
C11orf49-204ENST00000395460 MAGI2Q86UL8 1455 aa22.4■■□□□ 1.18
C11orf49-204ENST00000395460 TTC37Q6PGP7 1564 aa22.4■■□□□ 1.18
C11orf49-204ENST00000395460 KDM2AQ9Y2K7 1162 aa22.4■■□□□ 1.18
C11orf49-204ENST00000395460 ARHGAP5Q13017 1502 aa22.39■■□□□ 1.18
C11orf49-204ENST00000395460 EIF2AK4Q9P2K8 1649 aaKnown RBP22.38■■□□□ 1.17
C11orf49-204ENST00000395460 PARD3Q8TEW0 1356 aa22.38■■□□□ 1.17
C11orf49-204ENST00000395460 ABCC2Q92887 1545 aa22.38■■□□□ 1.17
C11orf49-204ENST00000395460 WASHC2CQ9Y4E1 1318 aa22.38■■□□□ 1.17
C11orf49-204ENST00000395460 INSRP06213 1382 aa22.37■■□□□ 1.17
C11orf49-204ENST00000395460 PRDM15P57071 1507 aaPredicted RBP22.37■■□□□ 1.17
C11orf49-204ENST00000395460 DUOX2Q9NRD8 1548 aa22.37■■□□□ 1.17
C11orf49-204ENST00000395460 A2MP01023 1474 aa22.36■■□□□ 1.17
C11orf49-204ENST00000395460 ZMYM4Q5VZL5 1548 aa22.36■■□□□ 1.17
C11orf49-204ENST00000395460 ERBINQ96RT1 1412 aa22.36■■□□□ 1.17
C11orf49-204ENST00000395460 MYO5CQ9NQX4 1742 aa22.35■■□□□ 1.17
C11orf49-204ENST00000395460 COL17A1Q9UMD9 1497 aaPredicted RBP22.35■■□□□ 1.17
C11orf49-204ENST00000395460 NLRP13Q86W25 1043 aa22.34■■□□□ 1.17
C11orf49-204ENST00000395460 CHD1O14646 1710 aa22.33■■□□□ 1.16
C11orf49-204ENST00000395460 PER1O15534 1290 aaPredicted RBP22.29■■□□□ 1.16
C11orf49-204ENST00000395460 PDE3BQ13370 1112 aa22.29■■□□□ 1.16
C11orf49-204ENST00000395460 PLCH2O75038 1416 aa22.28■■□□□ 1.16
C11orf49-204ENST00000395460 CNGB1Q14028 1251 aaPredicted RBP22.26■■□□□ 1.15
C11orf49-204ENST00000395460 CCDC136Q96JN2 1154 aa22.26■■□□□ 1.15
C11orf49-204ENST00000395460 TESK2Q96S53 571 aa22.26■■□□□ 1.15
C11orf49-204ENST00000395460 RNF17Q9BXT8 1623 aaKnown RBP22.25■■□□□ 1.15
C11orf49-204ENST00000395460 UHRF1BP1LA0JNW5 1464 aa22.25■■□□□ 1.15
C11orf49-204ENST00000395460 NBPF1Q3BBV0 1214 aa22.24■■□□□ 1.15
C11orf49-204ENST00000395460 ERICH6Q7L0X2 663 aa22.23■■□□□ 1.15
C11orf49-204ENST00000395460 ABCC1P33527 1531 aa22.22■■□□□ 1.15
C11orf49-204ENST00000395460 RGL3Q3MIN7 710 aa22.21■■□□□ 1.15
C11orf49-204ENST00000395460 STAC3Q96MF2 364 aa22.2■■□□□ 1.14
C11orf49-204ENST00000395460 ARAP3Q8WWN8 1544 aa22.2■■□□□ 1.14
C11orf49-204ENST00000395460 DISP3Q9P2K9 1392 aa22.2■■□□□ 1.14
C11orf49-204ENST00000395460 RRP1P56182 461 aaKnown RBP22.19■■□□□ 1.14
C11orf49-204ENST00000395460 BLMP54132 1417 aaPredicted RBP22.19■■□□□ 1.14
C11orf49-204ENST00000395460 TMF1P82094 1093 aa22.19■■□□□ 1.14
C11orf49-204ENST00000395460 EFCAB2Q5VUJ9 269 aa22.19■■□□□ 1.14
C11orf49-204ENST00000395460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.19■■□□□ 1.14
C11orf49-204ENST00000395460 MYT1LQ9UL68 1186 aa22.19■■□□□ 1.14
C11orf49-204ENST00000395460 RTEL1-TNFRSF6BF6WH68 1400 aa22.18■■□□□ 1.14
C11orf49-204ENST00000395460 ERCC6L2Q5T890 1561 aa22.17■■□□□ 1.14
C11orf49-204ENST00000395460 ZCCHC11Q5TAX3 1644 aaKnown RBP22.16■■□□□ 1.14
C11orf49-204ENST00000395460 RCAN3Q9UKA8 241 aa22.15■■□□□ 1.14
C11orf49-204ENST00000395460 TRPM2O94759 1503 aa22.14■■□□□ 1.14
C11orf49-204ENST00000395460 MADDQ8WXG6 1647 aa22.13■■□□□ 1.13
C11orf49-204ENST00000395460 CLASP1Q7Z460 1538 aa22.12■■□□□ 1.13
C11orf49-204ENST00000395460 PTPRTO14522 1441 aa22.12■■□□□ 1.13
C11orf49-204ENST00000395460 PANK3Q9H999 370 aa22.12■■□□□ 1.13
C11orf49-204ENST00000395460 SCAPERQ9BY12 1400 aa22.11■■□□□ 1.13
C11orf49-204ENST00000395460 IQGAP1P46940 1657 aa22.11■■□□□ 1.13
C11orf49-204ENST00000395460 TRAPPC8Q9Y2L5 1435 aa22.1■■□□□ 1.13
C11orf49-204ENST00000395460 NEURL4Q96JN8 1562 aa22.1■■□□□ 1.13
C11orf49-204ENST00000395460 DEPDC5O75140 1603 aa22.09■■□□□ 1.13
C11orf49-204ENST00000395460 ZFYVE16Q7Z3T8 1539 aa22.08■■□□□ 1.13
C11orf49-204ENST00000395460 WDR7Q9Y4E6 1490 aa22.08■■□□□ 1.13
C11orf49-204ENST00000395460 SPHKAPQ2M3C7 1700 aa22.07■■□□□ 1.12
C11orf49-204ENST00000395460 NOP58Q9Y2X3 529 aaKnown RBP22.07■■□□□ 1.12
C11orf49-204ENST00000395460 CEP152O94986 1710 aa22.06■■□□□ 1.12
C11orf49-204ENST00000395460 CDCA8Q53HL2 280 aa22.06■■□□□ 1.12
C11orf49-204ENST00000395460 SCAF11Q99590 1463 aaKnown RBP22.05■■□□□ 1.12
C11orf49-204ENST00000395460 SYNMO15061 1565 aa22.05■■□□□ 1.12
C11orf49-204ENST00000395460 SPAG9O60271 1321 aaKnown RBP22.05■■□□□ 1.12
C11orf49-204ENST00000395460 CC2D1BQ5T0F9 858 aaKnown RBP22.04■■□□□ 1.12
C11orf49-204ENST00000395460 TET3O43151 1660 aa22.04■■□□□ 1.12
C11orf49-204ENST00000395460 TCERG1O14776 1098 aaKnown RBP22.04■■□□□ 1.12
C11orf49-204ENST00000395460 ANP32AP39687 249 aaKnown RBP22.04■■□□□ 1.12
C11orf49-204ENST00000395460 VWDEQ8N2E2 1590 aa22.03■■□□□ 1.12
C11orf49-204ENST00000395460 NPC1L1Q9UHC9 1359 aa22.02■■□□□ 1.12
C11orf49-204ENST00000395460 EXOC6Q8TAG9 804 aa22.02■■□□□ 1.12
C11orf49-204ENST00000395460 SENP3-EIF4A1A0A087X0R7 540 aa22.02■■□□□ 1.11
C11orf49-204ENST00000395460 KIAA1210Q9ULL0 1709 aa22.02■■□□□ 1.11
C11orf49-204ENST00000395460 IPO9Q96P70 1041 aaKnown RBP22■■□□□ 1.11
C11orf49-204ENST00000395460 SLC24A1O60721 1099 aa21.99■■□□□ 1.11
C11orf49-204ENST00000395460 MS4A1P11836 297 aa21.99■■□□□ 1.11
C11orf49-204ENST00000395460 INO80Q9ULG1 1556 aaPredicted RBP21.99■■□□□ 1.11
C11orf49-204ENST00000395460 CLTCL1P53675 1640 aa21.99■■□□□ 1.11
C11orf49-204ENST00000395460 EIF3AQ14152 1382 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms