RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 EIF2AK4Q9P2K8 1649 aaKnown RBP35.88■■■■□ 3.33
CTF1-202ENST00000395019 BCORL1Q5H9F3 1711 aa35.86■■■■□ 3.33
CTF1-202ENST00000395019 AGLP35573 1532 aa35.82■■■■□ 3.33
CTF1-202ENST00000395019 KIF3BO15066 747 aa35.79■■■■□ 3.32
CTF1-202ENST00000395019 MROH1Q8NDA8 1641 aa35.79■■■■□ 3.32
CTF1-202ENST00000395019 RNF17Q9BXT8 1623 aaKnown RBP35.79■■■■□ 3.32
CTF1-202ENST00000395019 DEPDC5O75140 1603 aa35.78■■■■□ 3.32
CTF1-202ENST00000395019 MPHOSPH9Q99550 1183 aa35.78■■■■□ 3.32
CTF1-202ENST00000395019 UNC13BO14795 1591 aa35.74■■■■□ 3.31
CTF1-202ENST00000395019 ARID4BQ4LE39 1312 aaPredicted RBP35.73■■■■□ 3.31
CTF1-202ENST00000395019 SIN3AQ96ST3 1273 aa35.7■■■■□ 3.31
CTF1-202ENST00000395019 MLECQ14165 292 aa35.69■■■■□ 3.3
CTF1-202ENST00000395019 PZPP20742 1482 aa35.69■■■■□ 3.3
CTF1-202ENST00000395019 PRDM15P57071 1507 aaPredicted RBP35.68■■■■□ 3.3
CTF1-202ENST00000395019 GGT6Q6P531 493 aa35.68■■■■□ 3.3
CTF1-202ENST00000395019 TIMELESSQ9UNS1 1208 aa35.66■■■■□ 3.3
CTF1-202ENST00000395019 KDM5DQ9BY66 1539 aa35.65■■■■□ 3.3
CTF1-202ENST00000395019 CEP152O94986 1710 aa35.65■■■■□ 3.3
CTF1-202ENST00000395019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.65■■■■□ 3.3
CTF1-202ENST00000395019 SLC4A1APQ9BWU0 796 aaKnown RBP35.65■■■■□ 3.3
CTF1-202ENST00000395019 NEUROD1Q13562 356 aa35.62■■■■□ 3.29
CTF1-202ENST00000395019 VWDEQ8N2E2 1590 aa35.61■■■■□ 3.29
CTF1-202ENST00000395019 NUP155O75694 1391 aa35.59■■■■□ 3.29
CTF1-202ENST00000395019 IQGAP3Q86VI3 1631 aa35.59■■■■□ 3.29
CTF1-202ENST00000395019 FER1L4A9Z1Z3 1794 aa35.58■■■■□ 3.29
CTF1-202ENST00000395019 CLTCQ00610 1675 aaKnown RBP35.58■■■■□ 3.29
CTF1-202ENST00000395019 ADAMTSL3P82987 1691 aa35.57■■■■□ 3.28
CTF1-202ENST00000395019 MADDQ8WXG6 1647 aa35.55■■■■□ 3.28
CTF1-202ENST00000395019 ABCC3O15438 1527 aa35.54■■■■□ 3.28
CTF1-202ENST00000395019 ANKRD30BQ9BXX2 1392 aa35.53■■■■□ 3.28
CTF1-202ENST00000395019 FAM135AQ9P2D6 1515 aa35.53■■■■□ 3.28
CTF1-202ENST00000395019 ZC3H13Q5T200 1668 aaKnown RBP35.52■■■■□ 3.28
CTF1-202ENST00000395019 FOXD1Q16676 465 aa35.5■■■■□ 3.27
CTF1-202ENST00000395019 CAMSAP1Q5T5Y3 1602 aa35.48■■■■□ 3.27
CTF1-202ENST00000395019 RIMS1Q86UR5 1692 aaKnown RBP35.48■■■■□ 3.27
CTF1-202ENST00000395019 KANK1Q14678 1352 aa35.47■■■■□ 3.27
CTF1-202ENST00000395019 WASHC2CQ9Y4E1 1318 aa35.46■■■■□ 3.27
CTF1-202ENST00000395019 TET3O43151 1660 aa35.46■■■■□ 3.27
CTF1-202ENST00000395019 PKD2Q13563 968 aa35.46■■■■□ 3.27
CTF1-202ENST00000395019 LMTK2Q8IWU2 1503 aa35.45■■■■□ 3.27
CTF1-202ENST00000395019 TONSLQ96HA7 1378 aa35.45■■■■□ 3.26
CTF1-202ENST00000395019 E9PCH4 1651 aa35.42■■■■□ 3.26
CTF1-202ENST00000395019 CFAP65Q6ZU64 1925 aaKnown RBP35.42■■■■□ 3.26
CTF1-202ENST00000395019 MROH2AA6NES4 1674 aa35.4■■■■□ 3.26
CTF1-202ENST00000395019 EFCAB6Q5THR3 1501 aa35.4■■■■□ 3.26
CTF1-202ENST00000395019 PPP6R1Q9UPN7 881 aa35.39■■■■□ 3.26
CTF1-202ENST00000395019 RPRD2Q5VT52 1461 aaKnown RBP35.38■■■■□ 3.25
CTF1-202ENST00000395019 C3P01024 1663 aa35.37■■■■□ 3.25
CTF1-202ENST00000395019 PPP1R15AO75807 674 aaPredicted RBP35.36■■■■□ 3.25
CTF1-202ENST00000395019 KDM4FA0A1W2PPD8 638 aa35.34■■■■□ 3.25
CTF1-202ENST00000395019 CNTLNQ9NXG0 1405 aa35.33■■■■□ 3.25
CTF1-202ENST00000395019 ESF1Q9H501 851 aaKnown RBP35.32■■■■□ 3.25
CTF1-202ENST00000395019 NPATQ14207 1427 aa35.32■■■■□ 3.24
CTF1-202ENST00000395019 ZNF316A6NFI3 1004 aaPredicted RBP35.32■■■■□ 3.24
CTF1-202ENST00000395019 ZMYM3Q14202 1370 aa35.31■■■■□ 3.24
CTF1-202ENST00000395019 CEBPAP49715 358 aaPredicted RBP35.27■■■■□ 3.24
CTF1-202ENST00000395019 PREX1Q8TCU6 1659 aa35.27■■■■□ 3.24
CTF1-202ENST00000395019 ARHGAP31Q2M1Z3 1444 aa35.26■■■■□ 3.23
CTF1-202ENST00000395019 PLPPR3Q6T4P5 718 aa35.24■■■■□ 3.23
CTF1-202ENST00000395019 SPHKAPQ2M3C7 1700 aa35.23■■■■□ 3.23
CTF1-202ENST00000395019 PTPRMP28827 1452 aa35.23■■■■□ 3.23
CTF1-202ENST00000395019 FBXO31Q5XUX0 539 aaPredicted RBP35.22■■■■□ 3.23
CTF1-202ENST00000395019 ERVK-7P63135 1459 aa35.17■■■■□ 3.22
CTF1-202ENST00000395019 SYNMO15061 1565 aa35.17■■■■□ 3.22
CTF1-202ENST00000395019 L3MBTL2Q969R5 705 aa35.17■■■■□ 3.22
CTF1-202ENST00000395019 PLA2R1Q13018 1463 aa35.17■■■■□ 3.22
CTF1-202ENST00000395019 SPATA31D1Q6ZQQ2 1576 aa35.16■■■■□ 3.22
CTF1-202ENST00000395019 NOS1P29475 1434 aa35.13■■■■□ 3.21
CTF1-202ENST00000395019 UGGT1Q9NYU2 1555 aa35.12■■■■□ 3.21
CTF1-202ENST00000395019 PTPRTO14522 1441 aa35.11■■■■□ 3.21
CTF1-202ENST00000395019 TRPM2O94759 1503 aa35.09■■■■□ 3.21
CTF1-202ENST00000395019 CLTCL1P53675 1640 aa35.07■■■■□ 3.2
CTF1-202ENST00000395019 CCDC144AA2RUR9 1427 aa35.05■■■■□ 3.2
CTF1-202ENST00000395019 PIK3C2BO00750 1634 aa35.05■■■■□ 3.2
CTF1-202ENST00000395019 TNRQ92752 1358 aa35.01■■■■□ 3.2
CTF1-202ENST00000395019 MYO3AQ8NEV4 1616 aa35■■■■□ 3.19
CTF1-202ENST00000395019 SETD1BQ9UPS6 1966 aaKnown RBP34.97■■■■□ 3.19
CTF1-202ENST00000395019 MYO5BQ9ULV0 1848 aa34.96■■■■□ 3.19
CTF1-202ENST00000395019 KIF1BO60333 1816 aa34.92■■■■□ 3.18
CTF1-202ENST00000395019 IDI1Q13907 227 aa34.92■■■■□ 3.18
CTF1-202ENST00000395019 DIEXFQ68CQ4 756 aaKnown RBP34.91■■■■□ 3.18
CTF1-202ENST00000395019 NBPF8Q3BBV2 869 aa34.9■■■■□ 3.18
CTF1-202ENST00000395019 UBR1Q8IWV7 1749 aa34.87■■■■□ 3.17
CTF1-202ENST00000395019 ZNF142P52746 1687 aaPredicted RBP34.87■■■■□ 3.17
CTF1-202ENST00000395019 TMEM131LA2VDJ0 1609 aa34.86■■■■□ 3.17
CTF1-202ENST00000395019 UHRF1BP1Q6BDS2 1440 aa34.86■■■■□ 3.17
CTF1-202ENST00000395019 NLRP1Q9C000 1473 aa34.86■■■■□ 3.17
CTF1-202ENST00000395019 CEP170BQ9Y4F5 1589 aaPredicted RBP34.85■■■■□ 3.17
CTF1-202ENST00000395019 SLC52A1Q9NWF4 448 aa34.84■■■■□ 3.17
CTF1-202ENST00000395019 ADGRB3O60242 1522 aa34.83■■■■□ 3.17
CTF1-202ENST00000395019 A2ML1A8K2U0 1454 aa34.8■■■■□ 3.16
CTF1-202ENST00000395019 SPATA31E1Q6ZUB1 1445 aa34.79■■■■□ 3.16
CTF1-202ENST00000395019 KDM5AP29375 1690 aaKnown RBP34.78■■■■□ 3.16
CTF1-202ENST00000395019 CHGAP10645 457 aaKnown RBP34.77■■■■□ 3.16
CTF1-202ENST00000395019 DCAF11Q8TEB1 546 aa34.77■■■■□ 3.16
CTF1-202ENST00000395019 RGL3Q3MIN7 710 aa34.73■■■■□ 3.15
CTF1-202ENST00000395019 NEURL4Q96JN8 1562 aa34.73■■■■□ 3.15
CTF1-202ENST00000395019 LMTK3Q96Q04 1460 aa34.71■■■■□ 3.15
CTF1-202ENST00000395019 KDM2AQ9Y2K7 1162 aa34.71■■■■□ 3.15
CTF1-202ENST00000395019 IFT172Q9UG01 1749 aa34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms