RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 MBD5Q9P267 1494 aa7.89□□□□□ -1.15
MATR3-230ENST00000394800 LAS1LQ9Y4W2 734 aaKnown RBP7.89□□□□□ -1.15
MATR3-230ENST00000394800 NCLP19338 710 aaKnown RBP7.89□□□□□ -1.15
MATR3-230ENST00000394800 NBPF8Q3BBV2 869 aa7.89□□□□□ -1.15
MATR3-230ENST00000394800 ADGRL2O95490 1459 aa7.88□□□□□ -1.15
MATR3-230ENST00000394800 CLASP1Q7Z460 1538 aa7.88□□□□□ -1.15
MATR3-230ENST00000394800 TTC37Q6PGP7 1564 aa7.88□□□□□ -1.15
MATR3-230ENST00000394800 C9orf84Q5VXU9 1444 aa7.88□□□□□ -1.15
MATR3-230ENST00000394800 ANKRD50Q9ULJ7 1429 aa7.88□□□□□ -1.15
MATR3-230ENST00000394800 ADGBQ8N7X0 1667 aa7.88□□□□□ -1.15
MATR3-230ENST00000394800 APPP05067 770 aa7.87□□□□□ -1.15
MATR3-230ENST00000394800 SAMD9LQ8IVG5 1584 aa7.87□□□□□ -1.15
MATR3-230ENST00000394800 RPRD2Q5VT52 1461 aaKnown RBP7.87□□□□□ -1.15
MATR3-230ENST00000394800 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.87□□□□□ -1.152e-7■□□□□ 10.6
MATR3-230ENST00000394800 ABCC2Q92887 1545 aa7.87□□□□□ -1.15
MATR3-230ENST00000394800 ANKRD30AQ9BXX3 1397 aa7.87□□□□□ -1.15
MATR3-230ENST00000394800 PPP1R1BQ9UD71 204 aaPredicted RBP7.86□□□□□ -1.15
MATR3-230ENST00000394800 DEKP35659 375 aaKnown RBP7.86□□□□□ -1.15
MATR3-230ENST00000394800 TSPY4P0CV99 314 aa7.86□□□□□ -1.15
MATR3-230ENST00000394800 TSPY10P0CW01 314 aa7.86□□□□□ -1.15
MATR3-230ENST00000394800 PKD2Q13563 968 aa7.86□□□□□ -1.15
MATR3-230ENST00000394800 TEX14Q8IWB6 1497 aa7.86□□□□□ -1.15
MATR3-230ENST00000394800 ANP32EQ9BTT0 268 aa7.86□□□□□ -1.15
MATR3-230ENST00000394800 PREX2Q70Z35 1606 aa7.85□□□□□ -1.15
MATR3-230ENST00000394800 C11orf95C9JLR9 678 aaPredicted RBP7.85□□□□□ -1.15
MATR3-230ENST00000394800 VSIG10Q8N0Z9 540 aa7.85□□□□□ -1.15
MATR3-230ENST00000394800 KIF15Q9NS87 1388 aa7.85□□□□□ -1.15
MATR3-230ENST00000394800 HSPA5P11021 654 aaKnown RBP7.84□□□□□ -1.15
MATR3-230ENST00000394800 SYCP2Q9BX26 1530 aa7.84□□□□□ -1.15
MATR3-230ENST00000394800 NUP155O75694 1391 aa7.84□□□□□ -1.15
MATR3-230ENST00000394800 ARHGEF12Q9NZN5 1544 aa7.84□□□□□ -1.15
MATR3-230ENST00000394800 WASHC2AQ641Q2 1341 aa7.84□□□□□ -1.15
MATR3-230ENST00000394800 SHANK2Q9UPX8 1470 aa7.83□□□□□ -1.16
MATR3-230ENST00000394800 ZCCHC11Q5TAX3 1644 aaKnown RBP7.83□□□□□ -1.16
MATR3-230ENST00000394800 ARHGAP5Q13017 1502 aa7.83□□□□□ -1.16
MATR3-230ENST00000394800 KIAA1107Q9UPP5 1409 aa7.83□□□□□ -1.16
MATR3-230ENST00000394800 RAD21O60216 631 aa7.83□□□□□ -1.16
MATR3-230ENST00000394800 CCDC141Q6ZP82 1450 aa7.82□□□□□ -1.16
MATR3-230ENST00000394800 ARHGEF5Q12774 1597 aa7.82□□□□□ -1.16
MATR3-230ENST00000394800 MYO5CQ9NQX4 1742 aa7.81□□□□□ -1.16
MATR3-230ENST00000394800 EIF4G2P78344 907 aaKnown RBP eCLIP7.8□□□□□ -1.16
MATR3-230ENST00000394800 CNGB1Q14028 1251 aaPredicted RBP7.8□□□□□ -1.16
MATR3-230ENST00000394800 OS9Q13438 667 aaPredicted RBP7.8□□□□□ -1.16
MATR3-230ENST00000394800 ANO8Q9HCE9 1232 aaPredicted RBP7.8□□□□□ -1.16
MATR3-230ENST00000394800 AFAP1Q8N556 730 aa7.79□□□□□ -1.16
MATR3-230ENST00000394800 SPATA31E1Q6ZUB1 1445 aa7.79□□□□□ -1.16
MATR3-230ENST00000394800 UHRF1BP1LA0JNW5 1464 aa7.79□□□□□ -1.16
MATR3-230ENST00000394800 PLEKHH2Q8IVE3 1493 aa7.79□□□□□ -1.16
MATR3-230ENST00000394800 LMOD2Q6P5Q4 547 aa7.79□□□□□ -1.16
MATR3-230ENST00000394800 PLCH2O75038 1416 aa7.79□□□□□ -1.16
MATR3-230ENST00000394800 TRAPPC8Q9Y2L5 1435 aa7.79□□□□□ -1.16
MATR3-230ENST00000394800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.79□□□□□ -1.162e-7■■■□□ 18.1
MATR3-230ENST00000394800 RSPH4AQ5TD94 716 aa7.77□□□□□ -1.16
MATR3-230ENST00000394800 EFCAB2Q5VUJ9 269 aa7.77□□□□□ -1.17
MATR3-230ENST00000394800 KDM5DQ9BY66 1539 aa7.77□□□□□ -1.17
MATR3-230ENST00000394800 PLA2R1Q13018 1463 aa7.77□□□□□ -1.17
MATR3-230ENST00000394800 NEUROD2Q15784 382 aa7.77□□□□□ -1.17
MATR3-230ENST00000394800 FAM135AQ9P2D6 1515 aa7.77□□□□□ -1.17
MATR3-230ENST00000394800 KDM2AQ9Y2K7 1162 aa7.77□□□□□ -1.17
MATR3-230ENST00000394800 ANP32CO43423 234 aa7.77□□□□□ -1.17
MATR3-230ENST00000394800 CCDC184Q52MB2 194 aa7.76□□□□□ -1.17
MATR3-230ENST00000394800 WWC1Q8IX03 1113 aa7.76□□□□□ -1.17
MATR3-230ENST00000394800 ZNF592Q92610 1267 aa7.76□□□□□ -1.17
MATR3-230ENST00000394800 CCDC7Q96M83 1385 aa7.75□□□□□ -1.17
MATR3-230ENST00000394800 BCORL1Q5H9F3 1711 aa7.75□□□□□ -1.17
MATR3-230ENST00000394800 ABCC1P33527 1531 aa7.75□□□□□ -1.17
MATR3-230ENST00000394800 KIF7Q2M1P5 1343 aa7.75□□□□□ -1.17
MATR3-230ENST00000394800 MAST1Q9Y2H9 1570 aa7.75□□□□□ -1.17
MATR3-230ENST00000394800 RGL3Q3MIN7 710 aa7.75□□□□□ -1.17
MATR3-230ENST00000394800 PLCD4Q9BRC7 762 aa7.75□□□□□ -1.17
MATR3-230ENST00000394800 KCTD17Q8N5Z5 321 aa7.74□□□□□ -1.17
MATR3-230ENST00000394800 DCAF11Q8TEB1 546 aa7.74□□□□□ -1.17
MATR3-230ENST00000394800 CLSTN1O94985 981 aa7.74□□□□□ -1.17
MATR3-230ENST00000394800 PTMAP06454 111 aaKnown RBP7.74□□□□□ -1.17
MATR3-230ENST00000394800 OSCARQ8IYS5 282 aa7.74□□□□□ -1.17
MATR3-230ENST00000394800 WDR7Q9Y4E6 1490 aa7.74□□□□□ -1.17
MATR3-230ENST00000394800 TNNT2P45379 298 aaPredicted RBP7.74□□□□□ -1.17
MATR3-230ENST00000394800 PLXNC1O60486 1568 aa7.73□□□□□ -1.17
MATR3-230ENST00000394800 USP47Q96K76 1375 aa7.73□□□□□ -1.17
MATR3-230ENST00000394800 CCER2I3L3R5 266 aa7.73□□□□□ -1.17
MATR3-230ENST00000394800 UNC13BO14795 1591 aa7.73□□□□□ -1.17
MATR3-230ENST00000394800 ASXL2Q76L83 1435 aa7.72□□□□□ -1.17
MATR3-230ENST00000394800 SPAG9O60271 1321 aaKnown RBP7.72□□□□□ -1.17
MATR3-230ENST00000394800 CNTLNQ9NXG0 1405 aa7.71□□□□□ -1.17
MATR3-230ENST00000394800 FANCAO15360 1455 aa7.71□□□□□ -1.17
MATR3-230ENST00000394800 NBPF1Q3BBV0 1214 aa7.71□□□□□ -1.17
MATR3-230ENST00000394800 TMX4Q9H1E5 349 aaPredicted RBP7.71□□□□□ -1.17
MATR3-230ENST00000394800 UHRF1BP1Q6BDS2 1440 aa7.71□□□□□ -1.17
MATR3-230ENST00000394800 DUOX2Q9NRD8 1548 aa7.71□□□□□ -1.18
MATR3-230ENST00000394800 KDM5CP41229 1560 aa7.71□□□□□ -1.18
MATR3-230ENST00000394800 ST20-MTHFSA0A0A6YYL1 179 aa7.71□□□□□ -1.18
MATR3-230ENST00000394800 IQGAP3Q86VI3 1631 aa7.7□□□□□ -1.18
MATR3-230ENST00000394800 CCDC144AA2RUR9 1427 aa7.7□□□□□ -1.18
MATR3-230ENST00000394800 PRKRIP1Q9H875 184 aaPredicted RBP7.7□□□□□ -1.18
MATR3-230ENST00000394800 PRDM10Q9NQV6 1147 aa7.7□□□□□ -1.18
MATR3-230ENST00000394800 MAGI2Q86UL8 1455 aa7.7□□□□□ -1.18
MATR3-230ENST00000394800 POLR1AO95602 1720 aaPredicted RBP7.7□□□□□ -1.18
MATR3-230ENST00000394800 CARD11Q9BXL7 1154 aa7.7□□□□□ -1.18
MATR3-230ENST00000394800 BCCIPQ9P287 314 aaKnown RBP eCLIP7.7□□□□□ -1.18
MATR3-230ENST00000394800 ABCA9Q8IUA7 1624 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms