RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 BCAR3O75815 825 aa21.93■■□□□ 1.1
SIPA1-201ENST00000394224 MIA2Q96PC5 1412 aa21.93■■□□□ 1.1
SIPA1-201ENST00000394224 PZPP20742 1482 aa21.91■■□□□ 1.1
SIPA1-201ENST00000394224 CHGAP10645 457 aaKnown RBP21.91■■□□□ 1.1
SIPA1-201ENST00000394224 CUL7Q14999 1698 aa21.91■■□□□ 1.1
SIPA1-201ENST00000394224 RNF123Q5XPI4 1314 aa21.9■■□□□ 1.1
SIPA1-201ENST00000394224 BCORL1Q5H9F3 1711 aa21.9■■□□□ 1.1
SIPA1-201ENST00000394224 CLUAP1Q96AJ1 413 aa21.9■■□□□ 1.1
SIPA1-201ENST00000394224 APAF1O14727 1248 aa21.89■■□□□ 1.1
SIPA1-201ENST00000394224 LAMC3Q9Y6N6 1575 aa21.88■■□□□ 1.09
SIPA1-201ENST00000394224 PRKCSHP14314 528 aaPredicted RBP21.88■■□□□ 1.09
SIPA1-201ENST00000394224 DISP3Q9P2K9 1392 aa21.86■■□□□ 1.09
SIPA1-201ENST00000394224 BRD4O60885 1362 aaPredicted RBP21.86■■□□□ 1.09
SIPA1-201ENST00000394224 TCOF1Q13428 1488 aaKnown RBP21.86■■□□□ 1.09
SIPA1-201ENST00000394224 PPM1GO15355 546 aaPredicted RBP21.85■■□□□ 1.09
SIPA1-201ENST00000394224 HECW1Q76N89 1606 aa21.85■■□□□ 1.09
SIPA1-201ENST00000394224 CAMSAP2Q08AD1 1489 aa21.85■■□□□ 1.09
SIPA1-201ENST00000394224 TMF1P82094 1093 aa21.85■■□□□ 1.09
SIPA1-201ENST00000394224 SPINK5Q9NQ38 1064 aaPredicted RBP21.85■■□□□ 1.09
SIPA1-201ENST00000394224 SAMD9Q5K651 1589 aa21.84■■□□□ 1.09
SIPA1-201ENST00000394224 COG6Q9Y2V7 657 aa21.83■■□□□ 1.09
SIPA1-201ENST00000394224 NUP153P49790 1475 aaKnown RBP21.83■■□□□ 1.09
SIPA1-201ENST00000394224 IQGAP2Q13576 1575 aa21.82■■□□□ 1.08
SIPA1-201ENST00000394224 GSE1Q14687 1217 aa21.82■■□□□ 1.08
SIPA1-201ENST00000394224 PANK1Q8TE04 598 aa21.82■■□□□ 1.08
SIPA1-201ENST00000394224 GZF1Q9H116 711 aaPredicted RBP21.82■■□□□ 1.08
SIPA1-201ENST00000394224 PER1O15534 1290 aaPredicted RBP21.81■■□□□ 1.08
SIPA1-201ENST00000394224 ROCK1Q13464 1354 aa21.81■■□□□ 1.08
SIPA1-201ENST00000394224 GOLGA2Q08379 1002 aa21.79■■□□□ 1.08
SIPA1-201ENST00000394224 NUTM2DQ5VT03 806 aaPredicted RBP21.79■■□□□ 1.08
SIPA1-201ENST00000394224 DMRT2Q9Y5R5 561 aa21.79■■□□□ 1.08
SIPA1-201ENST00000394224 ARHGEF11O15085 1522 aa21.78■■□□□ 1.08
SIPA1-201ENST00000394224 CCDC144AA2RUR9 1427 aa21.78■■□□□ 1.08
SIPA1-201ENST00000394224 DDRGK1Q96HY6 314 aa21.78■■□□□ 1.08
SIPA1-201ENST00000394224 PPP2R1AP30153 589 aa21.75■■□□□ 1.07
SIPA1-201ENST00000394224 SAFB2Q14151 953 aaKnown RBP eCLIP21.75■■□□□ 1.07
SIPA1-201ENST00000394224 C9orf84Q5VXU9 1444 aa21.75■■□□□ 1.07
SIPA1-201ENST00000394224 GPATCH8Q9UKJ3 1502 aaKnown RBP21.75■■□□□ 1.07
SIPA1-201ENST00000394224 SEC24BO95487 1268 aa21.75■■□□□ 1.07
SIPA1-201ENST00000394224 TNNQ9UQP3 1299 aa21.75■■□□□ 1.07
SIPA1-201ENST00000394224 LRPPRCP42704 1394 aaKnown RBP21.74■■□□□ 1.07
SIPA1-201ENST00000394224 PDE3BQ13370 1112 aa21.74■■□□□ 1.07
SIPA1-201ENST00000394224 TROQ12816 1431 aaPredicted RBP21.73■■□□□ 1.07
SIPA1-201ENST00000394224 GCC2Q8IWJ2 1684 aa21.73■■□□□ 1.07
SIPA1-201ENST00000394224 PLEKHH1Q9ULM0 1364 aa21.73■■□□□ 1.07
SIPA1-201ENST00000394224 WDR62O43379 1518 aa21.72■■□□□ 1.07
SIPA1-201ENST00000394224 IGHDP01880 384 aa21.72■■□□□ 1.07
SIPA1-201ENST00000394224 FAM161AQ3B820 660 aa21.72■■□□□ 1.07
SIPA1-201ENST00000394224 MS4A1P11836 297 aa21.72■■□□□ 1.07
SIPA1-201ENST00000394224 TESK2Q96S53 571 aa21.72■■□□□ 1.07
SIPA1-201ENST00000394224 DUSP27Q5VZP5 1158 aa21.72■■□□□ 1.07
SIPA1-201ENST00000394224 KIAA0586Q9BVV6 1533 aa21.7■■□□□ 1.06
SIPA1-201ENST00000394224 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.69■■□□□ 1.06
SIPA1-201ENST00000394224 POGKQ9P215 609 aa21.69■■□□□ 1.06
SIPA1-201ENST00000394224 ARID4BQ4LE39 1312 aaPredicted RBP21.68■■□□□ 1.06
SIPA1-201ENST00000394224 C8orf34Q49A92 452 aa21.68■■□□□ 1.06
SIPA1-201ENST00000394224 ABCA5Q8WWZ7 1642 aa21.68■■□□□ 1.06
SIPA1-201ENST00000394224 CENPQQ7L2Z9 268 aaPredicted RBP21.67■■□□□ 1.06
SIPA1-201ENST00000394224 KIF14Q15058 1648 aa21.66■■□□□ 1.06
SIPA1-201ENST00000394224 DISP1Q96F81 1524 aa21.65■■□□□ 1.06
SIPA1-201ENST00000394224 PARD3Q8TEW0 1356 aa21.64■■□□□ 1.05
SIPA1-201ENST00000394224 AFAP1Q8N556 730 aa21.63■■□□□ 1.05
SIPA1-201ENST00000394224 DNMT1P26358 1616 aaKnown RBP21.62■■□□□ 1.05
SIPA1-201ENST00000394224 CFAP70Q5T0N1 1121 aa21.62■■□□□ 1.05
SIPA1-201ENST00000394224 USP35Q9P2H5 1018 aa21.61■■□□□ 1.05
SIPA1-201ENST00000394224 KDM5CP41229 1560 aa21.61■■□□□ 1.05
SIPA1-201ENST00000394224 KIF21AQ7Z4S6 1674 aa21.6■■□□□ 1.05
SIPA1-201ENST00000394224 TRAK1Q9UPV9 953 aa21.6■■□□□ 1.05
SIPA1-201ENST00000394224 RALGAPBQ86X10 1494 aa21.59■■□□□ 1.05
SIPA1-201ENST00000394224 FOXD4L1Q9NU39 408 aa21.59■■□□□ 1.05
SIPA1-201ENST00000394224 ERBINQ96RT1 1412 aa21.58■■□□□ 1.04
SIPA1-201ENST00000394224 ERCC6Q03468 1493 aa21.56■■□□□ 1.04
SIPA1-201ENST00000394224 MBD5Q9P267 1494 aa21.56■■□□□ 1.04
SIPA1-201ENST00000394224 MFAP1P55081 439 aaKnown RBP21.55■■□□□ 1.04
SIPA1-201ENST00000394224 TMEM132EQ6IEE7 984 aa21.55■■□□□ 1.04
SIPA1-201ENST00000394224 SLFN5Q08AF3 891 aa21.55■■□□□ 1.04
SIPA1-201ENST00000394224 CARMIL2Q6F5E8 1435 aa21.54■■□□□ 1.04
SIPA1-201ENST00000394224 KDM2BQ8NHM5 1336 aa21.53■■□□□ 1.04
SIPA1-201ENST00000394224 AMER1Q5JTC6 1135 aaPredicted RBP21.53■■□□□ 1.04
SIPA1-201ENST00000394224 CENPJQ9HC77 1338 aaPredicted RBP21.53■■□□□ 1.04
SIPA1-201ENST00000394224 U2SURPO15042 1029 aaKnown RBP21.53■■□□□ 1.04
SIPA1-201ENST00000394224 PRAG1Q86YV5 1406 aa21.52■■□□□ 1.04
SIPA1-201ENST00000394224 KIF3BO15066 747 aa21.52■■□□□ 1.03
SIPA1-201ENST00000394224 SLC12A5Q9H2X9 1139 aa21.52■■□□□ 1.03
SIPA1-201ENST00000394224 PLEKHH2Q8IVE3 1493 aa21.51■■□□□ 1.03
SIPA1-201ENST00000394224 MORC1Q86VD1 984 aa21.51■■□□□ 1.03
SIPA1-201ENST00000394224 RAPGEF6Q8TEU7 1601 aa21.5■■□□□ 1.03
SIPA1-201ENST00000394224 RLBP1P12271 317 aa21.5■■□□□ 1.03
SIPA1-201ENST00000394224 TSR2Q969E8 191 aaKnown RBP21.5■■□□□ 1.03
SIPA1-201ENST00000394224 GRIN2AQ12879 1464 aa21.49■■□□□ 1.03
SIPA1-201ENST00000394224 TARBP1Q13395 1621 aaKnown RBP21.48■■□□□ 1.03
SIPA1-201ENST00000394224 UPF2Q9HAU5 1272 aaKnown RBP21.48■■□□□ 1.03
SIPA1-201ENST00000394224 KIAA0556O60303 1618 aa21.48■■□□□ 1.03
SIPA1-201ENST00000394224 U2AF1L5P0DN76 240 aaPredicted RBP21.48■■□□□ 1.03
SIPA1-201ENST00000394224 U2AF1Q01081 240 aaKnown RBP eCLIP21.48■■□□□ 1.03
SIPA1-201ENST00000394224 PTPRGP23470 1445 aa21.47■■□□□ 1.03
SIPA1-201ENST00000394224 STK26Q9P289 416 aa21.47■■□□□ 1.03
SIPA1-201ENST00000394224 PCDHB15Q9Y5E8 787 aa21.47■■□□□ 1.03
SIPA1-201ENST00000394224 ADAMTS12P58397 1594 aa21.46■■□□□ 1.03
SIPA1-201ENST00000394224 FTSJ3Q8IY81 847 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms