RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 MYBBP1AQ9BQG0 1328 aaKnown RBP18.78■□□□□ 0.6
GAPVD1-205ENST00000394084 KDM5DQ9BY66 1539 aa18.77■□□□□ 0.6
GAPVD1-205ENST00000394084 RNF123Q5XPI4 1314 aa18.77■□□□□ 0.6
GAPVD1-205ENST00000394084 PTPRGP23470 1445 aa18.77■□□□□ 0.59
GAPVD1-205ENST00000394084 NBPF1Q3BBV0 1214 aa18.76■□□□□ 0.59
GAPVD1-205ENST00000394084 RALBP1Q15311 655 aa18.75■□□□□ 0.59
GAPVD1-205ENST00000394084 CCDC141Q6ZP82 1450 aa18.74■□□□□ 0.59
GAPVD1-205ENST00000394084 FAM135AQ9P2D6 1515 aa18.74■□□□□ 0.59
GAPVD1-205ENST00000394084 BRD4O60885 1362 aaPredicted RBP18.74■□□□□ 0.59
GAPVD1-205ENST00000394084 CCDC144AA2RUR9 1427 aa18.73■□□□□ 0.59
GAPVD1-205ENST00000394084 SAMD9LQ8IVG5 1584 aa18.73■□□□□ 0.59
GAPVD1-205ENST00000394084 ARHGEF5Q12774 1597 aa18.72■□□□□ 0.59
GAPVD1-205ENST00000394084 LRPPRCP42704 1394 aaKnown RBP18.72■□□□□ 0.59
GAPVD1-205ENST00000394084 BCL11AQ9H165 835 aa18.7■□□□□ 0.58
GAPVD1-205ENST00000394084 PRAG1Q86YV5 1406 aa18.7■□□□□ 0.58
GAPVD1-205ENST00000394084 CDC42BPBQ9Y5S2 1711 aa18.69■□□□□ 0.58
GAPVD1-205ENST00000394084 KTN1Q86UP2 1357 aaKnown RBP18.69■□□□□ 0.58
GAPVD1-205ENST00000394084 CC2D1BQ5T0F9 858 aaKnown RBP18.69■□□□□ 0.58
GAPVD1-205ENST00000394084 SYCP2Q9BX26 1530 aa18.68■□□□□ 0.58
GAPVD1-205ENST00000394084 NLRP13Q86W25 1043 aa18.68■□□□□ 0.58
GAPVD1-205ENST00000394084 ARHGAP5Q13017 1502 aa18.66■□□□□ 0.58
GAPVD1-205ENST00000394084 RRP1P56182 461 aaKnown RBP18.66■□□□□ 0.58
GAPVD1-205ENST00000394084 RSPH4AQ5TD94 716 aa18.66■□□□□ 0.58
GAPVD1-205ENST00000394084 PREX2Q70Z35 1606 aa18.66■□□□□ 0.58
GAPVD1-205ENST00000394084 E9PCH4 1651 aa18.66■□□□□ 0.58
GAPVD1-205ENST00000394084 EXOC6Q8TAG9 804 aa18.65■□□□□ 0.58
GAPVD1-205ENST00000394084 PLA2R1Q13018 1463 aa18.65■□□□□ 0.58
GAPVD1-205ENST00000394084 TRPM1Q7Z4N2 1603 aa18.65■□□□□ 0.58
GAPVD1-205ENST00000394084 NOP58Q9Y2X3 529 aaKnown RBP18.65■□□□□ 0.58
GAPVD1-205ENST00000394084 PAK3O75914 559 aaPredicted RBP18.64■□□□□ 0.57
GAPVD1-205ENST00000394084 RCAN3Q9UKA8 241 aa18.64■□□□□ 0.57
GAPVD1-205ENST00000394084 A2MP01023 1474 aa18.64■□□□□ 0.57
GAPVD1-205ENST00000394084 PARD3Q8TEW0 1356 aa18.64■□□□□ 0.57
GAPVD1-205ENST00000394084 DISP3Q9P2K9 1392 aa18.63■□□□□ 0.57
GAPVD1-205ENST00000394084 PER1O15534 1290 aaPredicted RBP18.63■□□□□ 0.57
GAPVD1-205ENST00000394084 CDCA7LQ96GN5 454 aa18.63■□□□□ 0.57
GAPVD1-205ENST00000394084 PLEKHH2Q8IVE3 1493 aa18.62■□□□□ 0.57
GAPVD1-205ENST00000394084 TTC37Q6PGP7 1564 aa18.61■□□□□ 0.57
GAPVD1-205ENST00000394084 PANK3Q9H999 370 aa18.61■□□□□ 0.57
GAPVD1-205ENST00000394084 TESK2Q96S53 571 aa18.61■□□□□ 0.57
GAPVD1-205ENST00000394084 NBR1Q14596 966 aa18.59■□□□□ 0.57
GAPVD1-205ENST00000394084 ANP32AP39687 249 aaKnown RBP18.59■□□□□ 0.57
GAPVD1-205ENST00000394084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.58■□□□□ 0.56
GAPVD1-205ENST00000394084 COL17A1Q9UMD9 1497 aaPredicted RBP18.57■□□□□ 0.56
GAPVD1-205ENST00000394084 GPRASP1Q5JY77 1395 aa18.57■□□□□ 0.56
GAPVD1-205ENST00000394084 UNC13BO14795 1591 aa18.56■□□□□ 0.56
GAPVD1-205ENST00000394084 ERBINQ96RT1 1412 aa18.56■□□□□ 0.56
GAPVD1-205ENST00000394084 PLIN1O60240 522 aa18.55■□□□□ 0.56
GAPVD1-205ENST00000394084 TMF1P82094 1093 aa18.55■□□□□ 0.56
GAPVD1-205ENST00000394084 PDE3BQ13370 1112 aa18.54■□□□□ 0.56
GAPVD1-205ENST00000394084 NPM2Q86SE8 214 aaKnown RBP18.54■□□□□ 0.56
GAPVD1-205ENST00000394084 IPO9Q96P70 1041 aaKnown RBP18.53■□□□□ 0.56
GAPVD1-205ENST00000394084 PRDM15P57071 1507 aaPredicted RBP18.53■□□□□ 0.56
GAPVD1-205ENST00000394084 MAST1Q9Y2H9 1570 aa18.52■□□□□ 0.56
GAPVD1-205ENST00000394084 MYO5CQ9NQX4 1742 aa18.52■□□□□ 0.56
GAPVD1-205ENST00000394084 ERCC6L2Q5T890 1561 aa18.51■□□□□ 0.55
GAPVD1-205ENST00000394084 IQGAP3Q86VI3 1631 aa18.51■□□□□ 0.55
GAPVD1-205ENST00000394084 CHD1O14646 1710 aa18.5■□□□□ 0.55
GAPVD1-205ENST00000394084 ZBTB47Q9UFB7 747 aaPredicted RBP18.5■□□□□ 0.55
GAPVD1-205ENST00000394084 WASHC2CQ9Y4E1 1318 aa18.49■□□□□ 0.55
GAPVD1-205ENST00000394084 DEKP35659 375 aaKnown RBP18.48■□□□□ 0.55
GAPVD1-205ENST00000394084 DUOX2Q9NRD8 1548 aa18.48■□□□□ 0.55
GAPVD1-205ENST00000394084 PLXNC1O60486 1568 aa18.48■□□□□ 0.55
GAPVD1-205ENST00000394084 SKAP1Q86WV1 359 aa18.47■□□□□ 0.55
GAPVD1-205ENST00000394084 ADAMTS8Q9UP79 889 aa18.47■□□□□ 0.55
GAPVD1-205ENST00000394084 EFCAB2Q5VUJ9 269 aa18.46■□□□□ 0.55
GAPVD1-205ENST00000394084 EIF2AK4Q9P2K8 1649 aaKnown RBP18.46■□□□□ 0.55
GAPVD1-205ENST00000394084 CRBNQ96SW2 442 aa18.46■□□□□ 0.55
GAPVD1-205ENST00000394084 LAMC1P11047 1609 aa18.46■□□□□ 0.55
GAPVD1-205ENST00000394084 BLMP54132 1417 aaPredicted RBP18.46■□□□□ 0.55
GAPVD1-205ENST00000394084 ABCC2Q92887 1545 aa18.45■□□□□ 0.54
GAPVD1-205ENST00000394084 TCERG1O14776 1098 aaKnown RBP18.45■□□□□ 0.54
GAPVD1-205ENST00000394084 KNSTRNQ9Y448 316 aa18.44■□□□□ 0.54
GAPVD1-205ENST00000394084 TRAPPC8Q9Y2L5 1435 aa18.44■□□□□ 0.54
GAPVD1-205ENST00000394084 PDE4AP27815 886 aa18.44■□□□□ 0.54
GAPVD1-205ENST00000394084 MYT1LQ9UL68 1186 aa18.44■□□□□ 0.54
GAPVD1-205ENST00000394084 ATP10AO60312 1499 aa18.43■□□□□ 0.54
GAPVD1-205ENST00000394084 AFAP1Q8N556 730 aa18.42■□□□□ 0.54
GAPVD1-205ENST00000394084 PLCH2O75038 1416 aa18.42■□□□□ 0.54
GAPVD1-205ENST00000394084 MAGI2Q86UL8 1455 aa18.42■□□□□ 0.54
GAPVD1-205ENST00000394084 PPP2R1AP30153 589 aa18.42■□□□□ 0.54
GAPVD1-205ENST00000394084 WDR43Q15061 677 aaKnown RBP eCLIP18.41■□□□□ 0.54
GAPVD1-205ENST00000394084 C20orf194Q5TEA3 1177 aa18.41■□□□□ 0.54
GAPVD1-205ENST00000394084 SPAG9O60271 1321 aaKnown RBP18.4■□□□□ 0.54
GAPVD1-205ENST00000394084 SHROOM2Q13796 1616 aa18.39■□□□□ 0.54
GAPVD1-205ENST00000394084 WDR7Q9Y4E6 1490 aa18.39■□□□□ 0.54
GAPVD1-205ENST00000394084 BACH2Q9BYV9 841 aa18.38■□□□□ 0.53
GAPVD1-205ENST00000394084 ZMYM4Q5VZL5 1548 aa18.38■□□□□ 0.53
GAPVD1-205ENST00000394084 RNF17Q9BXT8 1623 aaKnown RBP18.38■□□□□ 0.53
GAPVD1-205ENST00000394084 PLEKHH1Q9ULM0 1364 aa18.37■□□□□ 0.53
GAPVD1-205ENST00000394084 AMER1Q5JTC6 1135 aaPredicted RBP18.37■□□□□ 0.53
GAPVD1-205ENST00000394084 RTL5Q5HYW3 569 aaPredicted RBP18.36■□□□□ 0.53
GAPVD1-205ENST00000394084 ABCC1P33527 1531 aa18.36■□□□□ 0.53
GAPVD1-205ENST00000394084 INSRP06213 1382 aa18.35■□□□□ 0.53
GAPVD1-205ENST00000394084 MADDQ8WXG6 1647 aa18.35■□□□□ 0.53
GAPVD1-205ENST00000394084 CCDC146Q8IYE0 955 aa18.35■□□□□ 0.53
GAPVD1-205ENST00000394084 ZCCHC11Q5TAX3 1644 aaKnown RBP18.34■□□□□ 0.53
GAPVD1-205ENST00000394084 MS4A1P11836 297 aa18.34■□□□□ 0.53
GAPVD1-205ENST00000394084 LAS1LQ9Y4W2 734 aaKnown RBP18.33■□□□□ 0.53
GAPVD1-205ENST00000394084 CDCA8Q53HL2 280 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms