RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 GSE1Q14687 1217 aa20.89■□□□□ 0.93
PDZD4-202ENST00000393758 JPH4Q96JJ6 628 aa20.89■□□□□ 0.93
PDZD4-202ENST00000393758 USP35Q9P2H5 1018 aa20.89■□□□□ 0.93
PDZD4-202ENST00000393758 CTTNBP2Q8WZ74 1663 aa20.89■□□□□ 0.93
PDZD4-202ENST00000393758 ROCK1Q13464 1354 aa20.88■□□□□ 0.93
PDZD4-202ENST00000393758 GOLGA2Q08379 1002 aa20.88■□□□□ 0.93
PDZD4-202ENST00000393758 UPF2Q9HAU5 1272 aaKnown RBP20.87■□□□□ 0.93
PDZD4-202ENST00000393758 KDM5BQ9UGL1 1544 aa20.87■□□□□ 0.93
PDZD4-202ENST00000393758 DENND4BO75064 1496 aaPredicted RBP20.86■□□□□ 0.93
PDZD4-202ENST00000393758 CCDC144AA2RUR9 1427 aa20.85■□□□□ 0.93
PDZD4-202ENST00000393758 TEX14Q8IWB6 1497 aa20.84■□□□□ 0.93
PDZD4-202ENST00000393758 FAM161AQ3B820 660 aa20.83■□□□□ 0.93
PDZD4-202ENST00000393758 SPATA31E1Q6ZUB1 1445 aa20.83■□□□□ 0.93
PDZD4-202ENST00000393758 APAF1O14727 1248 aa20.82■□□□□ 0.92
PDZD4-202ENST00000393758 TCOF1Q13428 1488 aaKnown RBP20.82■□□□□ 0.92
PDZD4-202ENST00000393758 CENPQQ7L2Z9 268 aaPredicted RBP20.82■□□□□ 0.92
PDZD4-202ENST00000393758 RNF123Q5XPI4 1314 aa20.81■□□□□ 0.92
PDZD4-202ENST00000393758 FRAT2O75474 233 aaPredicted RBP20.8■□□□□ 0.92
PDZD4-202ENST00000393758 IQGAP2Q13576 1575 aa20.79■□□□□ 0.92
PDZD4-202ENST00000393758 BECN1Q14457 450 aa20.79■□□□□ 0.92
PDZD4-202ENST00000393758 CLUAP1Q96AJ1 413 aa20.78■□□□□ 0.92
PDZD4-202ENST00000393758 RRP7AQ9Y3A4 280 aaKnown RBP20.78■□□□□ 0.92
PDZD4-202ENST00000393758 BCL2L13Q9BXK5 485 aa20.77■□□□□ 0.92
PDZD4-202ENST00000393758 CAMSAP2Q08AD1 1489 aa20.76■□□□□ 0.91
PDZD4-202ENST00000393758 COG6Q9Y2V7 657 aa20.76■□□□□ 0.91
PDZD4-202ENST00000393758 TROQ12816 1431 aaPredicted RBP20.76■□□□□ 0.91
PDZD4-202ENST00000393758 CARMIL2Q6F5E8 1435 aa20.75■□□□□ 0.91
PDZD4-202ENST00000393758 CDCA8Q53HL2 280 aa20.75■□□□□ 0.91
PDZD4-202ENST00000393758 GZF1Q9H116 711 aaPredicted RBP20.75■□□□□ 0.91
PDZD4-202ENST00000393758 BCAR3O75815 825 aa20.74■□□□□ 0.91
PDZD4-202ENST00000393758 PLB1Q6P1J6 1458 aa20.74■□□□□ 0.91
PDZD4-202ENST00000393758 C9orf84Q5VXU9 1444 aa20.73■□□□□ 0.91
PDZD4-202ENST00000393758 PZPP20742 1482 aa20.73■□□□□ 0.91
PDZD4-202ENST00000393758 PPP2R1AP30153 589 aa20.71■□□□□ 0.91
PDZD4-202ENST00000393758 SAMD9Q5K651 1589 aa20.71■□□□□ 0.91
PDZD4-202ENST00000393758 PANK1Q8TE04 598 aa20.69■□□□□ 0.9
PDZD4-202ENST00000393758 LAMC3Q9Y6N6 1575 aa20.69■□□□□ 0.9
PDZD4-202ENST00000393758 PRKCSHP14314 528 aaPredicted RBP20.69■□□□□ 0.9
PDZD4-202ENST00000393758 HSP90AA1P07900 732 aaKnown RBP20.67■□□□□ 0.9
PDZD4-202ENST00000393758 DISP3Q9P2K9 1392 aa20.66■□□□□ 0.9
PDZD4-202ENST00000393758 GCC2Q8IWJ2 1684 aa20.66■□□□□ 0.9
PDZD4-202ENST00000393758 NUP153P49790 1475 aaKnown RBP20.66■□□□□ 0.9
PDZD4-202ENST00000393758 LRPPRCP42704 1394 aaKnown RBP20.65■□□□□ 0.9
PDZD4-202ENST00000393758 FTSJ3Q8IY81 847 aaKnown RBP20.65■□□□□ 0.9
PDZD4-202ENST00000393758 CENPJQ9HC77 1338 aaPredicted RBP20.65■□□□□ 0.9
PDZD4-202ENST00000393758 ERCC6Q03468 1493 aa20.64■□□□□ 0.89
PDZD4-202ENST00000393758 GPATCH8Q9UKJ3 1502 aaKnown RBP20.64■□□□□ 0.89
PDZD4-202ENST00000393758 ZNF608Q9ULD9 1512 aaPredicted RBP20.64■□□□□ 0.89
PDZD4-202ENST00000393758 MORC1Q86VD1 984 aa20.63■□□□□ 0.89
PDZD4-202ENST00000393758 PER1O15534 1290 aaPredicted RBP20.63■□□□□ 0.89
PDZD4-202ENST00000393758 ARHGEF11O15085 1522 aa20.62■□□□□ 0.89
PDZD4-202ENST00000393758 WDR62O43379 1518 aa20.61■□□□□ 0.89
PDZD4-202ENST00000393758 DUSP27Q5VZP5 1158 aa20.61■□□□□ 0.89
PDZD4-202ENST00000393758 SAFB2Q14151 953 aaKnown RBP eCLIP20.6■□□□□ 0.89
PDZD4-202ENST00000393758 RALGAPBQ86X10 1494 aa20.6■□□□□ 0.89
PDZD4-202ENST00000393758 KIAA0586Q9BVV6 1533 aa20.59■□□□□ 0.89
PDZD4-202ENST00000393758 LRRIQ1Q96JM4 1722 aa20.59■□□□□ 0.89
PDZD4-202ENST00000393758 ERBINQ96RT1 1412 aa20.59■□□□□ 0.89
PDZD4-202ENST00000393758 PARD3Q8TEW0 1356 aa20.58■□□□□ 0.89
PDZD4-202ENST00000393758 U2SURPO15042 1029 aaKnown RBP20.58■□□□□ 0.89
PDZD4-202ENST00000393758 MFAP1P55081 439 aaKnown RBP20.58■□□□□ 0.88
PDZD4-202ENST00000393758 NAP1L5Q96NT1 182 aaPredicted RBP20.58■□□□□ 0.88
PDZD4-202ENST00000393758 E9PSI1 815 aa20.57■□□□□ 0.88
PDZD4-202ENST00000393758 BCORL1Q5H9F3 1711 aa20.56■□□□□ 0.88
PDZD4-202ENST00000393758 DNMT1P26358 1616 aaKnown RBP20.55■□□□□ 0.88
PDZD4-202ENST00000393758 WASHC2CQ9Y4E1 1318 aa20.55■□□□□ 0.88
PDZD4-202ENST00000393758 POGKQ9P215 609 aa20.55■□□□□ 0.88
PDZD4-202ENST00000393758 U2AF1L5P0DN76 240 aaPredicted RBP20.54■□□□□ 0.88
PDZD4-202ENST00000393758 U2AF1Q01081 240 aaKnown RBP eCLIP20.54■□□□□ 0.88
PDZD4-202ENST00000393758 RSPH4AQ5TD94 716 aa20.54■□□□□ 0.88
PDZD4-202ENST00000393758 TESK2Q96S53 571 aa20.54■□□□□ 0.88
PDZD4-202ENST00000393758 SLFN5Q08AF3 891 aa20.54■□□□□ 0.88
PDZD4-202ENST00000393758 C8orf34Q49A92 452 aa20.54■□□□□ 0.88
PDZD4-202ENST00000393758 ABCA5Q8WWZ7 1642 aa20.53■□□□□ 0.88
PDZD4-202ENST00000393758 TRAK1Q9UPV9 953 aa20.53■□□□□ 0.88
PDZD4-202ENST00000393758 CFAP53Q96M91 514 aa20.53■□□□□ 0.88
PDZD4-202ENST00000393758 PTPRGP23470 1445 aa20.53■□□□□ 0.88
PDZD4-202ENST00000393758 PLEKHH1Q9ULM0 1364 aa20.53■□□□□ 0.88
PDZD4-202ENST00000393758 NUTM2DQ5VT03 806 aaPredicted RBP20.53■□□□□ 0.88
PDZD4-202ENST00000393758 IGHDP01880 384 aa20.52■□□□□ 0.88
PDZD4-202ENST00000393758 KIF3BO15066 747 aa20.52■□□□□ 0.88
PDZD4-202ENST00000393758 SPINK5Q9NQ38 1064 aaPredicted RBP20.51■□□□□ 0.87
PDZD4-202ENST00000393758 CGNL1Q0VF96 1302 aa20.51■□□□□ 0.87
PDZD4-202ENST00000393758 CFAP70Q5T0N1 1121 aa20.5■□□□□ 0.87
PDZD4-202ENST00000393758 EFCAB2Q5VUJ9 269 aa20.48■□□□□ 0.87
PDZD4-202ENST00000393758 ITPRIPQ8IWB1 547 aa20.48■□□□□ 0.87
PDZD4-202ENST00000393758 RWDD1Q9H446 243 aaPredicted RBP20.48■□□□□ 0.87
PDZD4-202ENST00000393758 FOXD4L1Q9NU39 408 aa20.48■□□□□ 0.87
PDZD4-202ENST00000393758 MAPK8IP3Q9UPT6 1336 aa20.48■□□□□ 0.87
PDZD4-202ENST00000393758 PMFBP1Q8TBY8 1022 aa20.47■□□□□ 0.87
PDZD4-202ENST00000393758 L1TD1Q5T7N2 865 aaKnown RBP20.46■□□□□ 0.87
PDZD4-202ENST00000393758 RAPGEF6Q8TEU7 1601 aa20.46■□□□□ 0.87
PDZD4-202ENST00000393758 SEC24BO95487 1268 aa20.46■□□□□ 0.87
PDZD4-202ENST00000393758 KDM5CP41229 1560 aa20.45■□□□□ 0.86
PDZD4-202ENST00000393758 AFAP1Q8N556 730 aa20.45■□□□□ 0.86
PDZD4-202ENST00000393758 PRAG1Q86YV5 1406 aa20.45■□□□□ 0.86
PDZD4-202ENST00000393758 SPAG9O60271 1321 aaKnown RBP20.45■□□□□ 0.86
PDZD4-202ENST00000393758 SMC4Q9NTJ3 1288 aa20.45■□□□□ 0.86
PDZD4-202ENST00000393758 DISP1Q96F81 1524 aa20.45■□□□□ 0.86
PDZD4-202ENST00000393758 MRC2Q9UBG0 1479 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms