RNA–Protein interactions for RNA: ENST00000393405.6

SNX11-202, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX11, Length 2,733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-202ENST00000393405 B4GALNT3Q6L9W6 998 aa20.66■□□□□ 0.9
SNX11-202ENST00000393405 PAK3O75914 559 aaPredicted RBP20.66■□□□□ 0.9
SNX11-202ENST00000393405 ARID4BQ4LE39 1312 aaPredicted RBP20.66■□□□□ 0.9
SNX11-202ENST00000393405 SMG6Q86US8 1419 aaKnown RBP20.65■□□□□ 0.9
SNX11-202ENST00000393405 DCAF11Q8TEB1 546 aa20.64■□□□□ 0.9
SNX11-202ENST00000393405 FAM135AQ9P2D6 1515 aa20.64■□□□□ 0.89
SNX11-202ENST00000393405 NOP58Q9Y2X3 529 aaKnown RBP20.63■□□□□ 0.89
SNX11-202ENST00000393405 CHD1O14646 1710 aa20.63■□□□□ 0.89
SNX11-202ENST00000393405 ST20-MTHFSA0A0A6YYL1 179 aa20.62■□□□□ 0.89
SNX11-202ENST00000393405 SYCP2Q9BX26 1530 aa20.62■□□□□ 0.89
SNX11-202ENST00000393405 TTC37Q6PGP7 1564 aa20.61■□□□□ 0.89
SNX11-202ENST00000393405 ROCK2O75116 1388 aaKnown RBP20.6■□□□□ 0.89
SNX11-202ENST00000393405 CCDC136Q96JN2 1154 aa20.6■□□□□ 0.89
SNX11-202ENST00000393405 RNF123Q5XPI4 1314 aa20.59■□□□□ 0.89
SNX11-202ENST00000393405 ARHGAP5Q13017 1502 aa20.57■□□□□ 0.88
SNX11-202ENST00000393405 SENP3-EIF4A1A0A087X0R7 540 aa20.57■□□□□ 0.88
SNX11-202ENST00000393405 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.56■□□□□ 0.88
SNX11-202ENST00000393405 RSPH4AQ5TD94 716 aa20.55■□□□□ 0.88
SNX11-202ENST00000393405 PNISRQ8TF01 805 aaKnown RBP20.55■□□□□ 0.88
SNX11-202ENST00000393405 CCDC144AA2RUR9 1427 aa20.54■□□□□ 0.88
SNX11-202ENST00000393405 ERCC6L2Q5T890 1561 aa20.54■□□□□ 0.88
SNX11-202ENST00000393405 IL27Q8NEV9 243 aa20.54■□□□□ 0.88
SNX11-202ENST00000393405 SHROOM2Q13796 1616 aa20.54■□□□□ 0.88
SNX11-202ENST00000393405 TRPM1Q7Z4N2 1603 aa20.53■□□□□ 0.88
SNX11-202ENST00000393405 E9PCH4 1651 aa20.53■□□□□ 0.88
SNX11-202ENST00000393405 NUDCQ9Y266 331 aa20.53■□□□□ 0.88
SNX11-202ENST00000393405 PLA2R1Q13018 1463 aa20.53■□□□□ 0.88
SNX11-202ENST00000393405 UNC13BO14795 1591 aa20.53■□□□□ 0.88
SNX11-202ENST00000393405 MAST1Q9Y2H9 1570 aa20.53■□□□□ 0.88
SNX11-202ENST00000393405 PRAG1Q86YV5 1406 aa20.53■□□□□ 0.88
SNX11-202ENST00000393405 TMC1Q8TDI8 760 aa20.52■□□□□ 0.88
SNX11-202ENST00000393405 RGL3Q3MIN7 710 aa20.52■□□□□ 0.87
SNX11-202ENST00000393405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.52■□□□□ 0.87
SNX11-202ENST00000393405 RTN4Q9NQC3 1192 aaKnown RBP20.52■□□□□ 0.87
SNX11-202ENST00000393405 MYO5CQ9NQX4 1742 aa20.5■□□□□ 0.87
SNX11-202ENST00000393405 NBPF1Q3BBV0 1214 aa20.49■□□□□ 0.87
SNX11-202ENST00000393405 PLEKHH2Q8IVE3 1493 aa20.49■□□□□ 0.87
SNX11-202ENST00000393405 ABCC2Q92887 1545 aa20.48■□□□□ 0.87
SNX11-202ENST00000393405 A2MP01023 1474 aa20.48■□□□□ 0.87
SNX11-202ENST00000393405 ANP32AP39687 249 aaKnown RBP20.47■□□□□ 0.87
SNX11-202ENST00000393405 PLXNC1O60486 1568 aa20.47■□□□□ 0.87
SNX11-202ENST00000393405 IPO9Q96P70 1041 aaKnown RBP20.47■□□□□ 0.87
SNX11-202ENST00000393405 IQGAP3Q86VI3 1631 aa20.46■□□□□ 0.87
SNX11-202ENST00000393405 MYBBP1AQ9BQG0 1328 aaKnown RBP20.45■□□□□ 0.86
SNX11-202ENST00000393405 LRPPRCP42704 1394 aaKnown RBP20.45■□□□□ 0.86
SNX11-202ENST00000393405 BRD4O60885 1362 aaPredicted RBP20.44■□□□□ 0.86
SNX11-202ENST00000393405 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.44■□□□□ 0.86
SNX11-202ENST00000393405 RALBP1Q15311 655 aa20.43■□□□□ 0.86
SNX11-202ENST00000393405 RTL5Q5HYW3 569 aaPredicted RBP20.42■□□□□ 0.86
SNX11-202ENST00000393405 GPRASP1Q5JY77 1395 aa20.42■□□□□ 0.86
SNX11-202ENST00000393405 KTN1Q86UP2 1357 aaKnown RBP20.42■□□□□ 0.86
SNX11-202ENST00000393405 DUOX2Q9NRD8 1548 aa20.4■□□□□ 0.86
SNX11-202ENST00000393405 PRDM15P57071 1507 aaPredicted RBP20.39■□□□□ 0.86
SNX11-202ENST00000393405 MAGI2Q86UL8 1455 aa20.39■□□□□ 0.86
SNX11-202ENST00000393405 COL17A1Q9UMD9 1497 aaPredicted RBP20.38■□□□□ 0.85
SNX11-202ENST00000393405 PARD3Q8TEW0 1356 aa20.38■□□□□ 0.85
SNX11-202ENST00000393405 ZBTB47Q9UFB7 747 aaPredicted RBP20.38■□□□□ 0.85
SNX11-202ENST00000393405 LAMC1P11047 1609 aa20.37■□□□□ 0.85
SNX11-202ENST00000393405 DISP3Q9P2K9 1392 aa20.37■□□□□ 0.85
SNX11-202ENST00000393405 PER1O15534 1290 aaPredicted RBP20.37■□□□□ 0.85
SNX11-202ENST00000393405 TESK2Q96S53 571 aa20.37■□□□□ 0.85
SNX11-202ENST00000393405 ZCCHC11Q5TAX3 1644 aaKnown RBP20.37■□□□□ 0.85
SNX11-202ENST00000393405 PLCH2O75038 1416 aa20.37■□□□□ 0.85
SNX11-202ENST00000393405 ERBINQ96RT1 1412 aa20.36■□□□□ 0.85
SNX11-202ENST00000393405 ATP10AO60312 1499 aa20.36■□□□□ 0.85
SNX11-202ENST00000393405 NLRP13Q86W25 1043 aa20.35■□□□□ 0.85
SNX11-202ENST00000393405 EIF2AK4Q9P2K8 1649 aaKnown RBP20.34■□□□□ 0.85
SNX11-202ENST00000393405 ABCC1P33527 1531 aa20.34■□□□□ 0.85
SNX11-202ENST00000393405 TRAPPC8Q9Y2L5 1435 aa20.34■□□□□ 0.85
SNX11-202ENST00000393405 EFCAB2Q5VUJ9 269 aa20.33■□□□□ 0.84
SNX11-202ENST00000393405 CC2D1BQ5T0F9 858 aaKnown RBP20.3■□□□□ 0.84
SNX11-202ENST00000393405 RNF17Q9BXT8 1623 aaKnown RBP20.29■□□□□ 0.84
SNX11-202ENST00000393405 PANK3Q9H999 370 aa20.28■□□□□ 0.84
SNX11-202ENST00000393405 CLASP1Q7Z460 1538 aa20.28■□□□□ 0.84
SNX11-202ENST00000393405 TCERG1O14776 1098 aaKnown RBP20.27■□□□□ 0.84
SNX11-202ENST00000393405 UHRF1BP1LA0JNW5 1464 aa20.27■□□□□ 0.83
SNX11-202ENST00000393405 TMF1P82094 1093 aa20.26■□□□□ 0.83
SNX11-202ENST00000393405 AFAP1Q8N556 730 aa20.25■□□□□ 0.83
SNX11-202ENST00000393405 SPAG9O60271 1321 aaKnown RBP20.24■□□□□ 0.83
SNX11-202ENST00000393405 WASHC2CQ9Y4E1 1318 aa20.24■□□□□ 0.83
SNX11-202ENST00000393405 RRP1P56182 461 aaKnown RBP20.24■□□□□ 0.83
SNX11-202ENST00000393405 MADDQ8WXG6 1647 aa20.23■□□□□ 0.83
SNX11-202ENST00000393405 USP35Q9P2H5 1018 aa20.23■□□□□ 0.83
SNX11-202ENST00000393405 ZFYVE16Q7Z3T8 1539 aa20.22■□□□□ 0.83
SNX11-202ENST00000393405 MS4A1P11836 297 aa20.21■□□□□ 0.83
SNX11-202ENST00000393405 UBE2Q2Q8WVN8 375 aa20.21■□□□□ 0.83
SNX11-202ENST00000393405 RCAN3Q9UKA8 241 aa20.21■□□□□ 0.83
SNX11-202ENST00000393405 CDCA7LQ96GN5 454 aa20.2■□□□□ 0.82
SNX11-202ENST00000393405 LAS1LQ9Y4W2 734 aaKnown RBP20.2■□□□□ 0.82
SNX11-202ENST00000393405 IQGAP1P46940 1657 aa20.2■□□□□ 0.82
SNX11-202ENST00000393405 TRPM2O94759 1503 aa20.2■□□□□ 0.82
SNX11-202ENST00000393405 SPHKAPQ2M3C7 1700 aa20.19■□□□□ 0.82
SNX11-202ENST00000393405 CEP152O94986 1710 aa20.19■□□□□ 0.82
SNX11-202ENST00000393405 CLTCL1P53675 1640 aa20.18■□□□□ 0.82
SNX11-202ENST00000393405 PDE3BQ13370 1112 aa20.18■□□□□ 0.82
SNX11-202ENST00000393405 WDR7Q9Y4E6 1490 aa20.18■□□□□ 0.82
SNX11-202ENST00000393405 EXOC6Q8TAG9 804 aa20.18■□□□□ 0.82
SNX11-202ENST00000393405 RTEL1-TNFRSF6BF6WH68 1400 aa20.17■□□□□ 0.82
SNX11-202ENST00000393405 BLMP54132 1417 aaPredicted RBP20.17■□□□□ 0.82
SNX11-202ENST00000393405 NPM2Q86SE8 214 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms