RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 CD109Q6YHK3 1445 aa25.55■■□□□ 1.68
TRAF3-203ENST00000392745 IQGAP3Q86VI3 1631 aa25.54■■□□□ 1.68
TRAF3-203ENST00000392745 MAGI2Q86UL8 1455 aa25.53■■□□□ 1.68
TRAF3-203ENST00000392745 ATP7AQ04656 1500 aa25.52■■□□□ 1.68
TRAF3-203ENST00000392745 INO80Q9ULG1 1556 aaPredicted RBP25.52■■□□□ 1.68
TRAF3-203ENST00000392745 HSPA5P11021 654 aaKnown RBP25.52■■□□□ 1.68
TRAF3-203ENST00000392745 RIMBP3CA6NJZ7 1639 aa25.51■■□□□ 1.67
TRAF3-203ENST00000392745 RIMBP3BA6NNM3 1639 aa25.51■■□□□ 1.67
TRAF3-203ENST00000392745 RIMBP3Q9UFD9 1639 aa25.51■■□□□ 1.67
TRAF3-203ENST00000392745 PLA2R1Q13018 1463 aa25.48■■□□□ 1.67
TRAF3-203ENST00000392745 EIF4G2P78344 907 aaKnown RBP eCLIP25.47■■□□□ 1.676e-8■■■■□ 21.2
TRAF3-203ENST00000392745 MYT1LQ9UL68 1186 aa25.47■■□□□ 1.67
TRAF3-203ENST00000392745 BCL11AQ9H165 835 aa25.43■■□□□ 1.66
TRAF3-203ENST00000392745 KIDINS220Q9ULH0 1771 aa25.43■■□□□ 1.66
TRAF3-203ENST00000392745 ZNF518AQ6AHZ1 1483 aa25.42■■□□□ 1.66
TRAF3-203ENST00000392745 ZNF326Q5BKZ1 582 aaKnown RBP25.42■■□□□ 1.66
TRAF3-203ENST00000392745 CFAP74Q9C0B2 1584 aa25.41■■□□□ 1.66
TRAF3-203ENST00000392745 CCDC144AA2RUR9 1427 aa25.41■■□□□ 1.66
TRAF3-203ENST00000392745 DHX29Q7Z478 1369 aaKnown RBP25.4■■□□□ 1.66
TRAF3-203ENST00000392745 DEPDC5O75140 1603 aa25.39■■□□□ 1.66
TRAF3-203ENST00000392745 KIF3BO15066 747 aa25.38■■□□□ 1.65
TRAF3-203ENST00000392745 UHRF1BP1Q6BDS2 1440 aa25.37■■□□□ 1.65
TRAF3-203ENST00000392745 KDM2AQ9Y2K7 1162 aa25.37■■□□□ 1.65
TRAF3-203ENST00000392745 WASHC2AQ641Q2 1341 aa25.37■■□□□ 1.65
TRAF3-203ENST00000392745 SPATA31E1Q6ZUB1 1445 aa25.37■■□□□ 1.65
TRAF3-203ENST00000392745 POGZQ7Z3K3 1410 aa25.37■■□□□ 1.65
TRAF3-203ENST00000392745 DCAF11Q8TEB1 546 aa25.37■■□□□ 1.65
TRAF3-203ENST00000392745 ATP10AO60312 1499 aa25.36■■□□□ 1.65
TRAF3-203ENST00000392745 KDM5CP41229 1560 aa25.35■■□□□ 1.65
TRAF3-203ENST00000392745 E9PCH4 1651 aa25.34■■□□□ 1.65
TRAF3-203ENST00000392745 C11orf95C9JLR9 678 aaPredicted RBP25.34■■□□□ 1.65
TRAF3-203ENST00000392745 NEO1Q92859 1461 aa25.32■■□□□ 1.64
TRAF3-203ENST00000392745 MAP3K4Q9Y6R4 1608 aa25.32■■□□□ 1.64
TRAF3-203ENST00000392745 RGL3Q3MIN7 710 aa25.32■■□□□ 1.64
TRAF3-203ENST00000392745 EIF2AK4Q9P2K8 1649 aaKnown RBP25.32■■□□□ 1.64
TRAF3-203ENST00000392745 MSH5O43196 834 aa25.31■■□□□ 1.64
TRAF3-203ENST00000392745 VWDEQ8N2E2 1590 aa25.31■■□□□ 1.64
TRAF3-203ENST00000392745 MLH3Q9UHC1 1453 aa25.3■■□□□ 1.64
TRAF3-203ENST00000392745 RAPGEF3O95398 923 aa25.3■■□□□ 1.64
TRAF3-203ENST00000392745 MROH1Q8NDA8 1641 aa25.3■■□□□ 1.64
TRAF3-203ENST00000392745 A2MP01023 1474 aa25.28■■□□□ 1.64
TRAF3-203ENST00000392745 RALGAPBQ86X10 1494 aa25.28■■□□□ 1.64
TRAF3-203ENST00000392745 GLI2P10070 1586 aa25.27■■□□□ 1.64
TRAF3-203ENST00000392745 KANK1Q14678 1352 aa25.27■■□□□ 1.64
TRAF3-203ENST00000392745 TET3O43151 1660 aa25.27■■□□□ 1.64
TRAF3-203ENST00000392745 PRDM15P57071 1507 aaPredicted RBP25.26■■□□□ 1.64
TRAF3-203ENST00000392745 HECW2Q9P2P5 1572 aa25.26■■□□□ 1.63
TRAF3-203ENST00000392745 HNRNPUQ00839 825 aaKnown RBP eCLIP25.26■■□□□ 1.63
TRAF3-203ENST00000392745 IRX6P78412 446 aaPredicted RBP25.26■■□□□ 1.63
TRAF3-203ENST00000392745 USP47Q96K76 1375 aa25.25■■□□□ 1.63
TRAF3-203ENST00000392745 FAM69CQ0P6D2 419 aa25.24■■□□□ 1.63
TRAF3-203ENST00000392745 CCDC7Q96M83 1385 aa25.23■■□□□ 1.63
TRAF3-203ENST00000392745 FRMPD1Q5SYB0 1578 aa25.23■■□□□ 1.63
TRAF3-203ENST00000392745 PTPRTO14522 1441 aa25.22■■□□□ 1.63
TRAF3-203ENST00000392745 SPHKAPQ2M3C7 1700 aa25.22■■□□□ 1.63
TRAF3-203ENST00000392745 ABCA6Q8N139 1617 aa25.21■■□□□ 1.63
TRAF3-203ENST00000392745 CARD11Q9BXL7 1154 aa25.21■■□□□ 1.63
TRAF3-203ENST00000392745 PRAG1Q86YV5 1406 aa25.21■■□□□ 1.63
TRAF3-203ENST00000392745 DIP2BQ9P265 1576 aa25.2■■□□□ 1.62
TRAF3-203ENST00000392745 TRPM2O94759 1503 aa25.2■■□□□ 1.62
TRAF3-203ENST00000392745 RICTORQ6R327 1708 aa25.2■■□□□ 1.62
TRAF3-203ENST00000392745 KIF7Q2M1P5 1343 aa25.19■■□□□ 1.62
TRAF3-203ENST00000392745 POLR1AO95602 1720 aaPredicted RBP25.18■■□□□ 1.62
TRAF3-203ENST00000392745 BCORL1Q5H9F3 1711 aa25.18■■□□□ 1.62
TRAF3-203ENST00000392745 RNF17Q9BXT8 1623 aaKnown RBP25.17■■□□□ 1.62
TRAF3-203ENST00000392745 TRPM1Q7Z4N2 1603 aa25.16■■□□□ 1.62
TRAF3-203ENST00000392745 CLTCL1P53675 1640 aa25.16■■□□□ 1.62
TRAF3-203ENST00000392745 ROCK2O75116 1388 aaKnown RBP25.15■■□□□ 1.62
TRAF3-203ENST00000392745 CEP152O94986 1710 aa25.14■■□□□ 1.62
TRAF3-203ENST00000392745 GGT6Q6P531 493 aa25.14■■□□□ 1.61
TRAF3-203ENST00000392745 TSPOAP1O95153 1857 aa25.14■■□□□ 1.61
TRAF3-203ENST00000392745 NBPF1Q3BBV0 1214 aa25.13■■□□□ 1.61
TRAF3-203ENST00000392745 FANCIQ9NVI1 1328 aa25.13■■□□□ 1.61
TRAF3-203ENST00000392745 PPRC1Q5VV67 1664 aaKnown RBP25.12■■□□□ 1.61
TRAF3-203ENST00000392745 EFCAB6Q5THR3 1501 aa25.12■■□□□ 1.61
TRAF3-203ENST00000392745 CNTLNQ9NXG0 1405 aa25.12■■□□□ 1.61
TRAF3-203ENST00000392745 LMTK2Q8IWU2 1503 aa25.12■■□□□ 1.61
TRAF3-203ENST00000392745 DIP2CQ9Y2E4 1556 aa25.12■■□□□ 1.61
TRAF3-203ENST00000392745 ST20-MTHFSA0A0A6YYL1 179 aa25.1■■□□□ 1.61
TRAF3-203ENST00000392745 YEATS2Q9ULM3 1422 aa25.09■■□□□ 1.61
TRAF3-203ENST00000392745 UGGT1Q9NYU2 1555 aa25.07■■□□□ 1.6
TRAF3-203ENST00000392745 CFAP65Q6ZU64 1925 aaKnown RBP25.07■■□□□ 1.6
TRAF3-203ENST00000392745 CCDC184Q52MB2 194 aa25.06■■□□□ 1.6
TRAF3-203ENST00000392745 GPRASP1Q5JY77 1395 aa25.05■■□□□ 1.6
TRAF3-203ENST00000392745 WASHC2CQ9Y4E1 1318 aa25.03■■□□□ 1.6
TRAF3-203ENST00000392745 NPATQ14207 1427 aa25.02■■□□□ 1.6
TRAF3-203ENST00000392745 POLR3GLQ9BT43 218 aa25.01■■□□□ 1.59
TRAF3-203ENST00000392745 ARID4BQ4LE39 1312 aaPredicted RBP25.01■■□□□ 1.59
TRAF3-203ENST00000392745 ABCC3O15438 1527 aa25.01■■□□□ 1.59
TRAF3-203ENST00000392745 MADDQ8WXG6 1647 aa25■■□□□ 1.59
TRAF3-203ENST00000392745 KIF13AQ9H1H9 1805 aa24.99■■□□□ 1.59
TRAF3-203ENST00000392745 LAMC1P11047 1609 aa24.99■■□□□ 1.59
TRAF3-203ENST00000392745 KIF1BO60333 1816 aa24.99■■□□□ 1.59
TRAF3-203ENST00000392745 ZMYM4Q5VZL5 1548 aa24.98■■□□□ 1.59
TRAF3-203ENST00000392745 ERICH6Q7L0X2 663 aa24.98■■□□□ 1.59
TRAF3-203ENST00000392745 PPP4R2Q9NY27 417 aa24.98■■□□□ 1.59
TRAF3-203ENST00000392745 NEURL4Q96JN8 1562 aa24.98■■□□□ 1.59
TRAF3-203ENST00000392745 STAC3Q96MF2 364 aa24.96■■□□□ 1.59
TRAF3-203ENST00000392745 ERICH6BQ5W0A0 696 aa24.96■■□□□ 1.59
TRAF3-203ENST00000392745 PRKRIP1Q9H875 184 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms