RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 LAS1LQ9Y4W2 734 aaKnown RBP21.59■■□□□ 1.05
TRA2A-202ENST00000392502 EIF4G2P78344 907 aaKnown RBP eCLIP21.58■■□□□ 1.05
TRA2A-202ENST00000392502 PDE4CQ08493 712 aa21.58■■□□□ 1.05
TRA2A-202ENST00000392502 ARHGEF5Q12774 1597 aa21.58■■□□□ 1.04
TRA2A-202ENST00000392502 RBM10P98175 930 aaKnown RBP21.57■■□□□ 1.04
TRA2A-202ENST00000392502 FRAT1Q92837 279 aaPredicted RBP21.57■■□□□ 1.04
TRA2A-202ENST00000392502 ANKRD30AQ9BXX3 1397 aa21.56■■□□□ 1.04
TRA2A-202ENST00000392502 CENPJQ9HC77 1338 aaPredicted RBP21.56■■□□□ 1.04
TRA2A-202ENST00000392502 DNAJC5Q9H3Z4 198 aa21.56■■□□□ 1.04
TRA2A-202ENST00000392502 TCERG1O14776 1098 aaKnown RBP21.55■■□□□ 1.04
TRA2A-202ENST00000392502 ZBED9Q6R2W3 1325 aa21.55■■□□□ 1.04
TRA2A-202ENST00000392502 PREX2Q70Z35 1606 aa21.55■■□□□ 1.04
TRA2A-202ENST00000392502 ANKRD50Q9ULJ7 1429 aa21.53■■□□□ 1.04
TRA2A-202ENST00000392502 HNRNPMP52272 730 aaKnown RBP eCLIP21.53■■□□□ 1.04
TRA2A-202ENST00000392502 C9orf84Q5VXU9 1444 aa21.53■■□□□ 1.04
TRA2A-202ENST00000392502 PKD2Q13563 968 aa21.52■■□□□ 1.04
TRA2A-202ENST00000392502 MS4A1P11836 297 aa21.51■■□□□ 1.03
TRA2A-202ENST00000392502 KIAA1107Q9UPP5 1409 aa21.51■■□□□ 1.03
TRA2A-202ENST00000392502 NFKBIBQ15653 356 aa21.51■■□□□ 1.03
TRA2A-202ENST00000392502 RNF123Q5XPI4 1314 aa21.48■■□□□ 1.03
TRA2A-202ENST00000392502 KDM5DQ9BY66 1539 aa21.48■■□□□ 1.03
TRA2A-202ENST00000392502 ABCC2Q92887 1545 aa21.47■■□□□ 1.03
TRA2A-202ENST00000392502 CALD1Q05682 793 aaKnown RBP21.47■■□□□ 1.03
TRA2A-202ENST00000392502 CDC42BPBQ9Y5S2 1711 aa21.47■■□□□ 1.03
TRA2A-202ENST00000392502 MBD5Q9P267 1494 aa21.46■■□□□ 1.03
TRA2A-202ENST00000392502 SAMD9LQ8IVG5 1584 aa21.45■■□□□ 1.03
TRA2A-202ENST00000392502 NUP155O75694 1391 aa21.45■■□□□ 1.02
TRA2A-202ENST00000392502 CCDC7Q96M83 1385 aa21.45■■□□□ 1.02
TRA2A-202ENST00000392502 TSPY4P0CV99 314 aa21.45■■□□□ 1.02
TRA2A-202ENST00000392502 TSPY10P0CW01 314 aa21.45■■□□□ 1.02
TRA2A-202ENST00000392502 SPATA31E1Q6ZUB1 1445 aa21.44■■□□□ 1.02
TRA2A-202ENST00000392502 MAST1Q9Y2H9 1570 aa21.44■■□□□ 1.02
TRA2A-202ENST00000392502 CNTLNQ9NXG0 1405 aa21.43■■□□□ 1.02
TRA2A-202ENST00000392502 KIF15Q9NS87 1388 aa21.43■■□□□ 1.02
TRA2A-202ENST00000392502 SMG6Q86US8 1419 aaKnown RBP21.42■■□□□ 1.02
TRA2A-202ENST00000392502 MYO5CQ9NQX4 1742 aa21.41■■□□□ 1.02
TRA2A-202ENST00000392502 PDIA4P13667 645 aaKnown RBP21.41■■□□□ 1.02
TRA2A-202ENST00000392502 ZNF326Q5BKZ1 582 aaKnown RBP21.41■■□□□ 1.02
TRA2A-202ENST00000392502 L1TD1Q5T7N2 865 aaKnown RBP21.41■■□□□ 1.02
TRA2A-202ENST00000392502 UHRF1BP1LA0JNW5 1464 aa21.41■■□□□ 1.02
TRA2A-202ENST00000392502 POLR1AO95602 1720 aaPredicted RBP21.41■■□□□ 1.02
TRA2A-202ENST00000392502 PNNQ9H307 717 aaKnown RBP21.41■■□□□ 1.02
TRA2A-202ENST00000392502 TTC37Q6PGP7 1564 aa21.4■■□□□ 1.02
TRA2A-202ENST00000392502 A0A0U1RQG5 324 aaPredicted RBP21.39■■□□□ 1.01
TRA2A-202ENST00000392502 CLCN1P35523 988 aa21.39■■□□□ 1.01
TRA2A-202ENST00000392502 NAP1L5Q96NT1 182 aaPredicted RBP21.39■■□□□ 1.01
TRA2A-202ENST00000392502 BACH2Q9BYV9 841 aa21.39■■□□□ 1.01
TRA2A-202ENST00000392502 CCDC184Q52MB2 194 aa21.39■■□□□ 1.01
TRA2A-202ENST00000392502 RSPH4AQ5TD94 716 aa21.39■■□□□ 1.01
TRA2A-202ENST00000392502 KIF7Q2M1P5 1343 aa21.38■■□□□ 1.01
TRA2A-202ENST00000392502 CCDC141Q6ZP82 1450 aa21.38■■□□□ 1.01
TRA2A-202ENST00000392502 PDCL3Q9H2J4 239 aa21.38■■□□□ 1.01
TRA2A-202ENST00000392502 PDE4AP27815 886 aa21.37■■□□□ 1.01
TRA2A-202ENST00000392502 PLEKHH2Q8IVE3 1493 aa21.37■■□□□ 1.01
TRA2A-202ENST00000392502 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.36■■□□□ 1.019e-16■■■■□ 20.9
TRA2A-202ENST00000392502 DCAF11Q8TEB1 546 aa21.36■■□□□ 1.01
TRA2A-202ENST00000392502 RIMBP3CA6NJZ7 1639 aa21.36■■□□□ 1.01
TRA2A-202ENST00000392502 RIMBP3BA6NNM3 1639 aa21.36■■□□□ 1.01
TRA2A-202ENST00000392502 RIMBP3Q9UFD9 1639 aa21.36■■□□□ 1.01
TRA2A-202ENST00000392502 NPM2Q86SE8 214 aaKnown RBP21.36■■□□□ 1.01
TRA2A-202ENST00000392502 RRAGDQ9NQL2 400 aaPredicted RBP21.36■■□□□ 1.01
TRA2A-202ENST00000392502 SYCP2Q9BX26 1530 aa21.35■■□□□ 1.01
TRA2A-202ENST00000392502 PLXNC1O60486 1568 aa21.34■■□□□ 1.01
TRA2A-202ENST00000392502 ARHGAP5Q13017 1502 aa21.33■■□□□ 1.01
TRA2A-202ENST00000392502 BCORL1Q5H9F3 1711 aa21.31■■□□□ 1
TRA2A-202ENST00000392502 ZCCHC11Q5TAX3 1644 aaKnown RBP21.31■■□□□ 1
TRA2A-202ENST00000392502 USP47Q96K76 1375 aa21.31■■□□□ 1
TRA2A-202ENST00000392502 PRKRIP1Q9H875 184 aaPredicted RBP21.31■■□□□ 1
TRA2A-202ENST00000392502 PRDM4Q9UKN5 801 aa21.29■■□□□ 1
TRA2A-202ENST00000392502 UNC13BO14795 1591 aa21.29■■□□□ 1
TRA2A-202ENST00000392502 ARHGEF12Q9NZN5 1544 aa21.29■■□□□ 1
TRA2A-202ENST00000392502 TPM2P07951 284 aa21.28■■□□□ 1
TRA2A-202ENST00000392502 ARAP3Q8WWN8 1544 aa21.28■■□□□ 1
TRA2A-202ENST00000392502 FAM135AQ9P2D6 1515 aa21.27■■□□□ 1
TRA2A-202ENST00000392502 KDM2AQ9Y2K7 1162 aa21.27■■□□□ 1
TRA2A-202ENST00000392502 KDM5CP41229 1560 aa21.26■□□□□ 0.99
TRA2A-202ENST00000392502 UHRF1BP1Q6BDS2 1440 aa21.26■□□□□ 0.99
TRA2A-202ENST00000392502 POLR3GLQ9BT43 218 aa21.25■□□□□ 0.99
TRA2A-202ENST00000392502 NUDCQ9Y266 331 aa21.25■□□□□ 0.99
TRA2A-202ENST00000392502 RALGAPBQ86X10 1494 aa21.23■□□□□ 0.99
TRA2A-202ENST00000392502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.23■□□□□ 0.996e-8■■□□□ 13.6
TRA2A-202ENST00000392502 CNGB1Q14028 1251 aaPredicted RBP21.21■□□□□ 0.99
TRA2A-202ENST00000392502 TAF7LQ5H9L4 462 aa21.21■□□□□ 0.99
TRA2A-202ENST00000392502 NCLP19338 710 aaKnown RBP21.21■□□□□ 0.99
TRA2A-202ENST00000392502 CARD11Q9BXL7 1154 aa21.2■□□□□ 0.98
TRA2A-202ENST00000392502 MRS2Q9HD23 443 aa21.2■□□□□ 0.98
TRA2A-202ENST00000392502 FAM9BQ8IZU0 186 aa21.19■□□□□ 0.98
TRA2A-202ENST00000392502 DHX29Q7Z478 1369 aaKnown RBP21.19■□□□□ 0.98
TRA2A-202ENST00000392502 IQGAP3Q86VI3 1631 aa21.19■□□□□ 0.98
TRA2A-202ENST00000392502 PLCH2O75038 1416 aa21.18■□□□□ 0.98
TRA2A-202ENST00000392502 DUOX2Q9NRD8 1548 aa21.18■□□□□ 0.98
TRA2A-202ENST00000392502 MAP7D2Q96T17 732 aa21.17■□□□□ 0.98
TRA2A-202ENST00000392502 PLA2R1Q13018 1463 aa21.17■□□□□ 0.98
TRA2A-202ENST00000392502 ABCC1P33527 1531 aa21.17■□□□□ 0.98
TRA2A-202ENST00000392502 CYB5RLQ6IPT4 315 aa21.16■□□□□ 0.98
TRA2A-202ENST00000392502 MAGI2Q86UL8 1455 aa21.16■□□□□ 0.98
TRA2A-202ENST00000392502 RGL3Q3MIN7 710 aa21.14■□□□□ 0.97
TRA2A-202ENST00000392502 ERBINQ96RT1 1412 aa21.13■□□□□ 0.97
TRA2A-202ENST00000392502 ST20-MTHFSA0A0A6YYL1 179 aa21.13■□□□□ 0.97
TRA2A-202ENST00000392502 CCDC144AA2RUR9 1427 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms